Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os12t0145700-01
CDS Infomation	cds chromosome:IRGSP-1.0:12:2245552:2249823:-1 gene:Os12g0145700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pyruvate kinase family protein. (Os12t0145700-01)
Sequence	ATGCATTCGACGAATCTGCTGCTGGAGGAGCCCATCAGGATGGCATCCATCCTGGAGCCA TCCAAGCCCAGCTTCTTCCCGGCGATGACCAAGATCGTGGGGACGCTGGGGCCAAAGTCG CGCTCCGTCGACACCATCTCCTCCTGCCTCAAGGCCGGCATGTCGGTGGCCCGATTTGAT TTCTCGTGGGGAGACGCCGAGTACCACCAGGAAACCCTTGAGAACCTCAAGGTCGCCATC AAGTCCACCAAGAAGCTCTGCGCGGTCATGCTTGACACGGTCGGCCCAGAGTTGCAGGTG GTGAACAAGAGCGAAGCCTCCATCTCCCTCGAGGAGAACGGCACTGTTATTCTCACCCCT GACCAGGGGCAGGAGGCCTCCTCACAAGTGCTGCCAATTAACTTCGCTGGGCTTGCTAAG GCTGTGAAGCCAGGTGACACAATATTTGTTGGGCAATACTTGTTCACAGGCAGTGAGACT ACTTCAGTTTGGTTAGAGGTTTCTCAAATTAAAGGAGATGATGTGGTCTGTGTGATAAAA AACACAGCAACTCTGGCTGGGTCGCTCTTCACATTGCATTGCTCGCAGATTCACATCGAC TTACCTACCCTATCTGATGAGGACAAGGAGGTTATCAGAAAATGGGGTGCCCCAAACAAG ATTGACTTCCTCTCTCTTTCTTATACAAGACATGTAGAAGATGTGCGACAGGCACGTGAA TTCCTCTCAAAGTTAGGTGACCTTAGCCAGACCCAGATTTTTGCAAAAATCGAGAATGTG GAGGGGTTGAATAATTTTGATGAAATCCTCCAAGAAGCTGATGGTATCATCCTGTCAAGA GGAAACCTTGGAATTGATCTTCCACCTGAAAAGGTGTTTTTATTTCAAAAGTCTGCTCTG CACAAGTGCAACATGGCTGGAAAGCCTGCTGTTGTTACTCGTGTTGTAGACAGTATGACT GACAACCTCAGGCCTACTCGTGCAGAGGCTACGGATGTGGCAAATGCAGTGCTTGACGGG AGTGATGCCATTCTCCTTGGTGCTGAGACTCTGCGTGGTTTATACCCAGTTGAGACTATT TCAATAGTGGGTAAAATTTGTGCTGAGGCTGAGAAGGTCTTCAACCAAGATTTATACTTC AAGAGAACTGTGAAACATGTGGGGGAGCCCATGACCCACTTGGAGTCTATTGCTTCCTCT GCGGTGCGAGCTGCTATTAAAGTGAAGGCGTCTGTCATAATTTGCTTCACATCATCTGGA CGTGCTGCAAGGCTAATTGCCAAGTATAGGCCAACCATGCCTGTTCTATCTGTTGTCATT CCTCGTCTAAAAACAAATCAACTGAGGTGGAGTTTCACTGGCGCATTTGAAGCAAGACAA TCGCTCATAGTTAGAGGCCTCTTTCCGATGCTTGCTGATCCGAGGCATCCAGCTGAATCA ACCAACGCTACAAATGAATCCGTTTTGAAGGTTGCTCTTGACCACGGTAAAGTTTCTGGT GTGATAAAGTCGCATGATCGCGTTGTTGTCTGCCAGAAGGTGGGAGATTCCTCGGTTGTG AAGATCATTGAGCTGGACGATTAG

Peptide Sequence

PEP ID	Os12t0145700-01
PEP Infomation	pep chromosome:IRGSP-1.0:12:2245552:2249823:-1 gene:Os12g0145700 transcript:Os12t0145700-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pyruvate kinase family protein. (Os12t0145700-01)
Sequence	MHSTNLLLEEPIRMASILEPSKPSFFPAMTKIVGTLGPKSRSVDTISSCLKAGMSVARFD FSWGDAEYHQETLENLKVAIKSTKKLCAVMLDTVGPELQVVNKSEASISLEENGTVILTP DQGQEASSQVLPINFAGLAKAVKPGDTIFVGQYLFTGSETTSVWLEVSQIKGDDVVCVIK NTATLAGSLFTLHCSQIHIDLPTLSDEDKEVIRKWGAPNKIDFLSLSYTRHVEDVRQARE FLSKLGDLSQTQIFAKIENVEGLNNFDEILQEADGIILSRGNLGIDLPPEKVFLFQKSAL HKCNMAGKPAVVTRVVDSMTDNLRPTRAEATDVANAVLDGSDAILLGAETLRGLYPVETI SIVGKICAEAEKVFNQDLYFKRTVKHVGEPMTHLESIASSAVRAAIKVKASVIICFTSSG RAARLIAKYRPTMPVLSVVIPRLKTNQLRWSFTGAFEARQSLIVRGLFPMLADPRHPAES TNATNESVLKVALDHGKVSGVIKSHDRVVVCQKVGDSSVVKIIELDD

Transcript Sequence

Transcript ID	Os12t0145700-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:12:2245552:2249823:-1 gene:Os12g0145700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pyruvate kinase family protein. (Os12t0145700-01)
Sequence	TTGGAGGCGCCACGTTTAAAGGGCGGAGTCGCTGTAATTAGAGAAGAGGATTTAAAGAGA GAGAAGGCCATTCTCTCTTGATTGCTTGGAGAGGAAGAAGAACAAGAGCCGCCACCGCCG CCGTTAGGTTTTTATTTATTTTTTTTCTCGATCTGATCCGAGGAGGAGCGAAGCGAAGAA GGGCAAGATGCATTCGACGAATCTGCTGCTGGAGGAGCCCATCAGGATGGCATCCATCCT GGAGCCATCCAAGCCCAGCTTCTTCCCGGCGATGACCAAGATCGTGGGGACGCTGGGGCC AAAGTCGCGCTCCGTCGACACCATCTCCTCCTGCCTCAAGGCCGGCATGTCGGTGGCCCG ATTTGATTTCTCGTGGGGAGACGCCGAGTACCACCAGGAAACCCTTGAGAACCTCAAGGT CGCCATCAAGTCCACCAAGAAGCTCTGCGCGGTCATGCTTGACACGGTCGGCCCAGAGTT GCAGGTGGTGAACAAGAGCGAAGCCTCCATCTCCCTCGAGGAGAACGGCACTGTTATTCT CACCCCTGACCAGGGGCAGGAGGCCTCCTCACAAGTGCTGCCAATTAACTTCGCTGGGCT TGCTAAGGCTGTGAAGCCAGGTGACACAATATTTGTTGGGCAATACTTGTTCACAGGCAG TGAGACTACTTCAGTTTGGTTAGAGGTTTCTCAAATTAAAGGAGATGATGTGGTCTGTGT GATAAAAAACACAGCAACTCTGGCTGGGTCGCTCTTCACATTGCATTGCTCGCAGATTCA CATCGACTTACCTACCCTATCTGATGAGGACAAGGAGGTTATCAGAAAATGGGGTGCCCC AAACAAGATTGACTTCCTCTCTCTTTCTTATACAAGACATGTAGAAGATGTGCGACAGGC ACGTGAATTCCTCTCAAAGTTAGGTGACCTTAGCCAGACCCAGATTTTTGCAAAAATCGA GAATGTGGAGGGGTTGAATAATTTTGATGAAATCCTCCAAGAAGCTGATGGTATCATCCT GTCAAGAGGAAACCTTGGAATTGATCTTCCACCTGAAAAGGTGTTTTTATTTCAAAAGTC TGCTCTGCACAAGTGCAACATGGCTGGAAAGCCTGCTGTTGTTACTCGTGTTGTAGACAG TATGACTGACAACCTCAGGCCTACTCGTGCAGAGGCTACGGATGTGGCAAATGCAGTGCT TGACGGGAGTGATGCCATTCTCCTTGGTGCTGAGACTCTGCGTGGTTTATACCCAGTTGA GACTATTTCAATAGTGGGTAAAATTTGTGCTGAGGCTGAGAAGGTCTTCAACCAAGATTT ATACTTCAAGAGAACTGTGAAACATGTGGGGGAGCCCATGACCCACTTGGAGTCTATTGC TTCCTCTGCGGTGCGAGCTGCTATTAAAGTGAAGGCGTCTGTCATAATTTGCTTCACATC ATCTGGACGTGCTGCAAGGCTAATTGCCAAGTATAGGCCAACCATGCCTGTTCTATCTGT TGTCATTCCTCGTCTAAAAACAAATCAACTGAGGTGGAGTTTCACTGGCGCATTTGAAGC AAGACAATCGCTCATAGTTAGAGGCCTCTTTCCGATGCTTGCTGATCCGAGGCATCCAGC TGAATCAACCAACGCTACAAATGAATCCGTTTTGAAGGTTGCTCTTGACCACGGTAAAGT TTCTGGTGTGATAAAGTCGCATGATCGCGTTGTTGTCTGCCAGAAGGTGGGAGATTCCTC GGTTGTGAAGATCATTGAGCTGGACGATTAGACAAGCAGCTTGTGCTCGTCGTCGATGAT ACTATGGCATGTTTTGCCAGATTTTGACTAGGCCAAAAACGTTGCTTCTTGGCTATGTAT AATCCTATAGCTTCAAATGAGCAGTTTTTCCTATGGTGTATTCATAGGATTTGCCTTACA GCTTGAAACCATTATGATTTAGTTAAGGAAATTAAATTTGCGCAG