Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os12t0145500-01
CDS Infomation

cds chromosome:IRGSP-1.0:12:2236066:2239402:1 gene:Os12g0145500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:FK506 binding protein 42a description:Peptidyl-prolyl cis-trans isomerase, FKBP-type domain containing protein. (Os12t0145500-01)
Sequence

ATGGCCGTGCTGGAAGAAGATCCGGCCCCGGTACCCGCCGCCGATTCTACCTCCGGTGCT
AGCGATGATGAGATAACAGTGGAAGAAACTTCCTTTGTGCATACTGAGCCTCCTCAAGAT
GGCACTGCTCCACCTGTGGTTACCTCTGATATGGAAGTCCTTAATGATAAAGTCAAAAAG
CAAGTCATCAAGGAAGGCCATGGCAAGAAACCCTCAAGGTTTGCCACATGCTTTGTTCAC
TATAGAGCATGGGTTCAAGGTTCTTCGCACAAATTCGAGGATACTTGGCAAGAACAGCAT
TCAATTGAACTAGTACTTGGAAAAGAGAAAAAGGAAATGACTGGTTTAGGCATTGGTGTC
AGTAACATGAGAAGTGGGGAGCGTGCATTGTTACATGTTAACTGGGAGCTTGGCTATGGG
AAAGAAGGAAGCTTTTCATTCCCAAATGTCCCTCCAATGGCAGACCTTGTATATGAAGTT
GAACTTATTGGGTTTGATGATGTCAAAGAGGGAAAAGCCCGAAGTGATATGACAGTGGAA
GAAAGGATTGAAGCAGCAGACAGGAGGAAGATTGAAGGCAATGAATATTTCAAAGAAAAG
AAGTTCGAGGAGGCTATGCAGCAATATGAAATGGCAATTGCATACATGGGGGATGATTTC
ATGTTTCAATTGTTTGGGAAGTACAGAGACATGGCCTTAGCTGTGAAAAATCCCTGCCAT
CTCAACATGGCCGCATGCCTGATCAAACTGAAGAGATTTGATGAAGCTATCGCACAGTGT
ACAATTGTGTTGTCAGAGGATGAAAACAACGTGAAAGCGTTGTTCAGACGAGGAAAAGCT
AGAGCTGAACTTGGTCAAACAGAATCAGCAAGGGAGGACTTCCTGAAGGCCAAGAAGTAT
TCTCCAGAAGACAAGGAGATCCAGCGCGAGCTTCGGTCGCTCGCGGAGCAGGATAAAGCT
CTGTACCAGAAACAAAAGGAGCTATACAAAGGTCTGTTCGGGCCAAGGCCTGAACCCAAA
CCGAAGGCGTCAAATTTCCTAGTTCTCTTCTGGCGATGGCTGGTCTCCTTAATTGGCTAT
CTTGTTAAACTGTTCAAACGCAAGGATGAGTAG

Peptide Sequence

PEP ID

Os12t0145500-01
PEP Infomation

pep chromosome:IRGSP-1.0:12:2236066:2239402:1 gene:Os12g0145500 transcript:Os12t0145500-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:FK506 binding protein 42a description:Peptidyl-prolyl cis-trans isomerase, FKBP-type domain containing protein. (Os12t0145500-01)
Sequence

MAVLEEDPAPVPAADSTSGASDDEITVEETSFVHTEPPQDGTAPPVVTSDMEVLNDKVKK
QVIKEGHGKKPSRFATCFVHYRAWVQGSSHKFEDTWQEQHSIELVLGKEKKEMTGLGIGV
SNMRSGERALLHVNWELGYGKEGSFSFPNVPPMADLVYEVELIGFDDVKEGKARSDMTVE
ERIEAADRRKIEGNEYFKEKKFEEAMQQYEMAIAYMGDDFMFQLFGKYRDMALAVKNPCH
LNMAACLIKLKRFDEAIAQCTIVLSEDENNVKALFRRGKARAELGQTESAREDFLKAKKY
SPEDKEIQRELRSLAEQDKALYQKQKELYKGLFGPRPEPKPKASNFLVLFWRWLVSLIGY
LVKLFKRKDE

Transcript Sequence

Transcript ID

Os12t0145500-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:12:2236066:2239402:1 gene:Os12g0145500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:FK506 binding protein 42a description:Peptidyl-prolyl cis-trans isomerase, FKBP-type domain containing protein. (Os12t0145500-01)
Sequence

ACGATCCCCCGGTGAAGTGCCGAGCTAAGCTCTCGTCTCCTCGAGCCATCCGCCTCCAAA
TCCGCGGACCAGCCGCCTGCCCGCCGTCCCGCACCGATGGCCGTGCTGGAAGAAGATCCG
GCCCCGGTACCCGCCGCCGATTCTACCTCCGGTGCTAGCGATGATGAGATAACAGTGGAA
GAAACTTCCTTTGTGCATACTGAGCCTCCTCAAGATGGCACTGCTCCACCTGTGGTTACC
TCTGATATGGAAGTCCTTAATGATAAAGTCAAAAAGCAAGTCATCAAGGAAGGCCATGGC
AAGAAACCCTCAAGGTTTGCCACATGCTTTGTTCACTATAGAGCATGGGTTCAAGGTTCT
TCGCACAAATTCGAGGATACTTGGCAAGAACAGCATTCAATTGAACTAGTACTTGGAAAA
GAGAAAAAGGAAATGACTGGTTTAGGCATTGGTGTCAGTAACATGAGAAGTGGGGAGCGT
GCATTGTTACATGTTAACTGGGAGCTTGGCTATGGGAAAGAAGGAAGCTTTTCATTCCCA
AATGTCCCTCCAATGGCAGACCTTGTATATGAAGTTGAACTTATTGGGTTTGATGATGTC
AAAGAGGGAAAAGCCCGAAGTGATATGACAGTGGAAGAAAGGATTGAAGCAGCAGACAGG
AGGAAGATTGAAGGCAATGAATATTTCAAAGAAAAGAAGTTCGAGGAGGCTATGCAGCAA
TATGAAATGGCAATTGCATACATGGGGGATGATTTCATGTTTCAATTGTTTGGGAAGTAC
AGAGACATGGCCTTAGCTGTGAAAAATCCCTGCCATCTCAACATGGCCGCATGCCTGATC
AAACTGAAGAGATTTGATGAAGCTATCGCACAGTGTACAATTGTGTTGTCAGAGGATGAA
AACAACGTGAAAGCGTTGTTCAGACGAGGAAAAGCTAGAGCTGAACTTGGTCAAACAGAA
TCAGCAAGGGAGGACTTCCTGAAGGCCAAGAAGTATTCTCCAGAAGACAAGGAGATCCAG
CGCGAGCTTCGGTCGCTCGCGGAGCAGGATAAAGCTCTGTACCAGAAACAAAAGGAGCTA
TACAAAGGTCTGTTCGGGCCAAGGCCTGAACCCAAACCGAAGGCGTCAAATTTCCTAGTT
CTCTTCTGGCGATGGCTGGTCTCCTTAATTGGCTATCTTGTTAAACTGTTCAAACGCAAG
GATGAGTAGGGATAGGACATGTTTTACTGGAAAAATTATGCAGTATTGACCATCTTGTAC
TGTAGGTTGGAAATTCGAGTTGTGCAGCACGCAATCGGTGTCAAATATTGTTGTTAGAAA
CTCCTGACATTTTTGTGCTTCGTGAGCATTGGAGCTATGGTTCGTATAGAGCTTTTAACC
TTTTGCTTGTGGGT