Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os12t0141800-01
CDS Infomation

cds chromosome:IRGSP-1.0:12:2028539:2030789:1 gene:Os12g0141800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Domain of unknown function DUF2828 domain containing protein. (Os12t0141800-01)
Sequence

ATGGAGAGTGGAGAGAGCAAGCCGAAACCCCCAAAACCCTCCTCCACCTCGCCGCTGCGC
GCTATGTCCTCCGCCGCCGGGGACCACCTAATCCTTGGCCCTCCCGTCGCGGGCCTCCCC
GTCGGGAATGCGTCGTCGTCAGCCGAAGCGGGCTCCACCTCCACCGCGGGACATGTCGCA
GGCGCGGAGGTCGTCGAGCACTTGCAAAGTGGCGCCTTTGGCAACCCCTGCCTTAGTTTC
TTCGCCCTCGTCGACAGGGACACGCCGCCCCAGCACCTCCGCGACCTCCTCGCCGCCGCC
TGGGAGCACGATGCCCTCACCGCGCTCAAGCTCGTCTTCAACCTCCGCGGCGTGCGCGAC
AACGGCAAGGGCGACAGGGAGGGATTCTACACCGCCGCGCTCTGGATGCACCAATACCAC
CCACGCACGCTCGCCGGCAACCTCTCCGCGTTCGCCGAGTTCGGCTACATCAAGGACTTC
CCCGAGCTTCTCTACCGCATCATCCACGGCGCTGATGCACGCAAGGTCGCTAAGGCCAAG
TCCAAGGCCTGA

Peptide Sequence

PEP ID

Os12t0141800-01
PEP Infomation

pep chromosome:IRGSP-1.0:12:2028539:2030789:1 gene:Os12g0141800 transcript:Os12t0141800-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Domain of unknown function DUF2828 domain containing protein. (Os12t0141800-01)
Sequence

MESGESKPKPPKPSSTSPLRAMSSAAGDHLILGPPVAGLPVGNASSSAEAGSTSTAGHVA
GAEVVEHLQSGAFGNPCLSFFALVDRDTPPQHLRDLLAAAWEHDALTALKLVFNLRGVRD
NGKGDREGFYTAALWMHQYHPRTLAGNLSAFAEFGYIKDFPELLYRIIHGADARKVAKAK
SKA

Transcript Sequence

Transcript ID

Os12t0141800-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:12:2028539:2030789:1 gene:Os12g0141800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Domain of unknown function DUF2828 domain containing protein. (Os12t0141800-01)
Sequence

GGCAGGCGGAGAAAAACCAAGGACAAGGAAACCCCTTCCCTTTCCTGGAGAGCACGGGTG
ATGGAGAGTGGAGAGAGCAAGCCGAAACCCCCAAAACCCTCCTCCACCTCGCCGCTGCGC
GCTATGTCCTCCGCCGCCGGGGACCACCTAATCCTTGGCCCTCCCGTCGCGGGCCTCCCC
GTCGGGAATGCGTCGTCGTCAGCCGAAGCGGGCTCCACCTCCACCGCGGGACATGTCGCA
GGCGCGGAGGTCGTCGAGCACTTGCAAAGTGGCGCCTTTGGCAACCCCTGCCTTAGTTTC
TTCGCCCTCGTCGACAGGGACACGCCGCCCCAGCACCTCCGCGACCTCCTCGCCGCCGCC
TGGGAGCACGATGCCCTCACCGCGCTCAAGCTCGTCTTCAACCTCCGCGGCGTGCGCGAC
AACGGCAAGGGCGACAGGGAGGGATTCTACACCGCCGCGCTCTGGATGCACCAATACCAC
CCACGCACGCTCGCCGGCAACCTCTCCGCGTTCGCCGAGTTCGGCTACATCAAGGACTTC
CCCGAGCTTCTCTACCGCATCATCCACGGCGCTGATGCACGCAAGGTCGCTAAGGCCAAG
TCCAAGGCCTGAGGGGGCGACCTCGCCAGACTGAGCGGCCGGAAGCGCGCCCGCGACGAC
GACGACGACCCTACGCCTGCGGCGTCTACCGATGCGGTCCAGGTCCAGCCCCAGCCCCAG
CCCCAGCCCCAGCCCGACCACTTGCTCGCCGACGCCGTCAACCTGGAGACAGAGGATGTC
GTGGGGGAGGCGCCGGTGAAGGGCAGCCCCAGCAAGAAGGTGCTCAAGGCGGCCCGCCTC
GCCAAGTTGGCCATGAAAATATACCATGAAGATGACAACTATCGTCTCCTCTTCAACTCC
ATCACCAGTTTCTTTGTGGACAAAACCTCCGCTCCGATCTCGAGCACCACAAGTCCGGCA
AGCTGTCCAAGATCGGGCTCACCGCCAAATGTTGTCCCTCACCAGACTCGTCCTTCGACC
AATCCACATTGTTATGTGAGGCCATCGCTCGCGGTCTCTTTCCACGCGAATCAGACGCTA
GCTACGCCAACATGAAAGAGAAGCATTACATCTTCCTTGTGCGCCGCCGTCTCCGCCGCG
AGGTTCTCGTGCCGCTGCGTAAGGACCTGGAGCTGCCCGAGATTTATATGTCCAAAAACC
AATGGTCTGATCTGCCTTACGAGCGCGTGGCCTCAGAGGCCATGAGGATTTACGAGCACT
TGTTCAAGAAGCACGATGAAGGGCGCTTCACGGCGTTTCTCAAAGACCACAAAGATAGCC
GCGAGGCCGCCAAGCACAAGGCAAAGAAGGCGGCGCCCCAGCCACCCCTTCTGCAAGACA
TCATTACCTCGCTTGGCCTGGCATCGCATGCCAGCAACATCAAACGAAGGGAGGATGCTG
CTCAGCAGTGGCGCACTTTGGTCGATCATCTCCGTGGGAAGGGATCTCTGTGCAATTGTA
TGGCGGTCTGCGACGTCAACAAGGGGGGGCTGGTCAAAAGTGAAGGCCAGAAGTTGTTGA
AGATCTGTGTGGGGCTTGGATTCTTAATCTCTGAACTCAGTTCGCCTCCATGGACGAACT
CGGTGCATGCCTTCGCTTCAAACTATTTCCCTCTTGTGCTTCCTGTTGGCAGCTATCGGG
AAAAGTTGAATTTTATTCGCCAGATGCCTTGCGAAGAGAGGTTTAACCTAAAGAAGGTGT
TTGAGGGGATAATTACAAGGGCAGTAACGAGTGGTGTTACCCCGGACAATATGGTGAAGA
CCATATTCATATTCACAGACAAGTTTTTTGAGAAGGCATCAGTGCGTCCGGTTGAGCTGA
TTGAACATGAAGATTTTAATCCATTGTCGTCGCGTCCGTGGCATGAAGAATATCGGAGGG
TGTGCGAAGAATTCAAGAGGGTAGGCTTTCAGGACGTGGTACCTCAGATCGTACTGTGGA
ACCTTAAGGGGCCACGCTCTGCAGGCTTAACCGCAACTAAGGATGGAGTCATGACACTTA
GTGGATACTCGGATGAGTTGATGAGATTGTTTCTTGAGAACAATGGGGTGGTGGAGCCGG
AAGATGAGATGCTTGATGCAATTGCTGGGGACGAGTACCAGAAACTTCAAGTGATTGATT
AGGATAACTGGTCTAGAGGTTTGAGATTATATGAGTGACTAGGAGATCTATGTTTATCCT
GACTCAGTAATACCTTTTTTGTGTTGGATGC