Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os12t0139300-01
CDS Infomation

cds chromosome:IRGSP-1.0:12:1906051:1909152:-1 gene:Os12g0139300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CPD2 description:Similar to Cytochrome P450 90A1 (EC 1.14.-.-). (Os12t0139300-01)
Sequence

ATGGCCGCGGCCGCGCTGCTCCTCCTCGCCGCGGCCGCCGCCGCCGTCGTGGTTGCCATG
GCGCTCAGATGGCTCCTCCTCCTCGGGGGCCCCGCCGCCGGGAGGCTGGGGAAGAGGGCG
CGGATGCCGCCGGGGAGCACGGGCCTGCCTCTGATTGGCGAGACGCTGCGGCTCATCTCG
GCGTACAAGACGCCCAACCCGGAGCCGTTCATCGACGAGCGCGTGGCGCGCCACGGCGGC
GTGTTCACCACCCACGTCTTCGGCGAGCGCACCGTGTTCTCCGCCGACCCGGCCTTCAAC
CGCCTCCTCCTCGCCGCCGAGGGCCGCGCCGTCCACTCCAGCTACCCGTCCTCCATCGCC
ACGCTCCTCGGCGCGCGCTCCCTGCTCCTCACCCGCGGCGCCGCGCACAAGCGGCTCCAC
TCCCTCACCCTCACCCGCCTCGGCCGCCCCGCGTCGCCGCCCCTCCTCGCGCACATCGAC
CGCCTCGTGCTCGCCACCATGCGCCAGTGGGAGCCCGCCGCCACCGTCCGCCTCATGGAC
GAGGCCAAGAAGATCACCTTCAACCTCACCGTCAAGCAGCTCGTCAGCATCGAGCCGGGA
CCGTGGACCGAGAGCCTCCGCCGCGAGTACGTCAAGCTCATCGACGGCTTCTTCTCCATC
CCCTTTCCTCTCGCCTACTTCCTCCCTTTTACCACCTACGGCCAGGCCCTCAAGGCGAGG
AAGAAGGTGGCCGGTGCACTGCGGGAGGTGATAAAGAAGAGGATGGAGGAGAAAGCGGAG
AATGGTGGCTCCATTGGGGATGATGAGGGGAAGAAGGAGAAGAAGGACATGGTGGAGGAG
CTTCTTCAGGCGGAGGGTGGCAGCTTCTCGGAGGAAGAGATGGTGGATTTCTGCCTTTCT
CTGCTGGTGGCTGGGTATGAGACTACGTCCGTGCTCATGACGCTCGCGGTCAAGTTCCTC
ACTGAGACGCCTGCTGCGCTAGCTGAGCTCAAGGAAGAGCATGCCAATATCAGGGATATG
AAAGGGAAAAACCAACCATTAGAGTGGAGCGATTACAAGTCCATGCCATTTACTCAATGT
GTGATAAATGAGACACTCCGTGTGGGTAACATTATTAGTGGAGTATTCAGGCGAGCAAAC
ACTGATATTCATTATAAAGATTACACAATTCCAAAGGGATGCAAGATTTTTGCTTCATTC
CGAGCTGTGCACCTTAATAATGAACACTACGAGAATGCTCGGACATTTAACCCTTGGAGA
TGGCAGATCAACAATAAACTTCAGAATGCGGTAGGGGCCAATATATTTACTCCATTTGGT
GGTGGACCTCGGTTGTGTCCTGGCTATGAGCTTGCCCGGGTTGTCGTTTCTATCTTCCTC
CATCATCTTGTAACGCGCTTTAGCTGGGAAGAAACCGAAGAAGATAGACTTGTCTTCTTC
CCCACCACACGAACTCTCAAAGGATACCCTATCAATCTTCGGCTGCTTTCAGAATCAATT
TGCTGA

Peptide Sequence

PEP ID

Os12t0139300-01
PEP Infomation

pep chromosome:IRGSP-1.0:12:1906051:1909152:-1 gene:Os12g0139300 transcript:Os12t0139300-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CPD2 description:Similar to Cytochrome P450 90A1 (EC 1.14.-.-). (Os12t0139300-01)
Sequence

MAAAALLLLAAAAAAVVVAMALRWLLLLGGPAAGRLGKRARMPPGSTGLPLIGETLRLIS
AYKTPNPEPFIDERVARHGGVFTTHVFGERTVFSADPAFNRLLLAAEGRAVHSSYPSSIA
TLLGARSLLLTRGAAHKRLHSLTLTRLGRPASPPLLAHIDRLVLATMRQWEPAATVRLMD
EAKKITFNLTVKQLVSIEPGPWTESLRREYVKLIDGFFSIPFPLAYFLPFTTYGQALKAR
KKVAGALREVIKKRMEEKAENGGSIGDDEGKKEKKDMVEELLQAEGGSFSEEEMVDFCLS
LLVAGYETTSVLMTLAVKFLTETPAALAELKEEHANIRDMKGKNQPLEWSDYKSMPFTQC
VINETLRVGNIISGVFRRANTDIHYKDYTIPKGCKIFASFRAVHLNNEHYENARTFNPWR
WQINNKLQNAVGANIFTPFGGGPRLCPGYELARVVVSIFLHHLVTRFSWEETEEDRLVFF
PTTRTLKGYPINLRLLSESIC

Transcript Sequence

Transcript ID

Os12t0139300-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:12:1906051:1909152:-1 gene:Os12g0139300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:CPD2 description:Similar to Cytochrome P450 90A1 (EC 1.14.-.-). (Os12t0139300-01)
Sequence

AGCAGATCCTCTGGTTGTCGGAGCCTCATCAATCTCACTCATTCTCACTCGCTCCTTGCC
CACGACGCGCACGGCCACGCCGCCATGGCCGCGGCCGCGCTGCTCCTCCTCGCCGCGGCC
GCCGCCGCCGTCGTGGTTGCCATGGCGCTCAGATGGCTCCTCCTCCTCGGGGGCCCCGCC
GCCGGGAGGCTGGGGAAGAGGGCGCGGATGCCGCCGGGGAGCACGGGCCTGCCTCTGATT
GGCGAGACGCTGCGGCTCATCTCGGCGTACAAGACGCCCAACCCGGAGCCGTTCATCGAC
GAGCGCGTGGCGCGCCACGGCGGCGTGTTCACCACCCACGTCTTCGGCGAGCGCACCGTG
TTCTCCGCCGACCCGGCCTTCAACCGCCTCCTCCTCGCCGCCGAGGGCCGCGCCGTCCAC
TCCAGCTACCCGTCCTCCATCGCCACGCTCCTCGGCGCGCGCTCCCTGCTCCTCACCCGC
GGCGCCGCGCACAAGCGGCTCCACTCCCTCACCCTCACCCGCCTCGGCCGCCCCGCGTCG
CCGCCCCTCCTCGCGCACATCGACCGCCTCGTGCTCGCCACCATGCGCCAGTGGGAGCCC
GCCGCCACCGTCCGCCTCATGGACGAGGCCAAGAAGATCACCTTCAACCTCACCGTCAAG
CAGCTCGTCAGCATCGAGCCGGGACCGTGGACCGAGAGCCTCCGCCGCGAGTACGTCAAG
CTCATCGACGGCTTCTTCTCCATCCCCTTTCCTCTCGCCTACTTCCTCCCTTTTACCACC
TACGGCCAGGCCCTCAAGGCGAGGAAGAAGGTGGCCGGTGCACTGCGGGAGGTGATAAAG
AAGAGGATGGAGGAGAAAGCGGAGAATGGTGGCTCCATTGGGGATGATGAGGGGAAGAAG
GAGAAGAAGGACATGGTGGAGGAGCTTCTTCAGGCGGAGGGTGGCAGCTTCTCGGAGGAA
GAGATGGTGGATTTCTGCCTTTCTCTGCTGGTGGCTGGGTATGAGACTACGTCCGTGCTC
ATGACGCTCGCGGTCAAGTTCCTCACTGAGACGCCTGCTGCGCTAGCTGAGCTCAAGGAA
GAGCATGCCAATATCAGGGATATGAAAGGGAAAAACCAACCATTAGAGTGGAGCGATTAC
AAGTCCATGCCATTTACTCAATGTGTGATAAATGAGACACTCCGTGTGGGTAACATTATT
AGTGGAGTATTCAGGCGAGCAAACACTGATATTCATTATAAAGATTACACAATTCCAAAG
GGATGCAAGATTTTTGCTTCATTCCGAGCTGTGCACCTTAATAATGAACACTACGAGAAT
GCTCGGACATTTAACCCTTGGAGATGGCAGATCAACAATAAACTTCAGAATGCGGTAGGG
GCCAATATATTTACTCCATTTGGTGGTGGACCTCGGTTGTGTCCTGGCTATGAGCTTGCC
CGGGTTGTCGTTTCTATCTTCCTCCATCATCTTGTAACGCGCTTTAGCTGGGAAGAAACC
GAAGAAGATAGACTTGTCTTCTTCCCCACCACACGAACTCTCAAAGGATACCCTATCAAT
CTTCGGCTGCTTTCAGAATCAATTTGCTGACGTTAGATTGTTTTGCAGCTGCTCTTATCT
TGGAAGAAAGACTAAACATAGATAAATTTATAGAAAAATAGTTCTCGCATAGGTAGTGCA
TTTCCCTCTTTTTTGTTGATCTGTAACCTGGTATGTAAACAGTAGGCAGCAGAGTTGTGC
TGCTTGTAAAATGACCTAAAATGCTGTGGATACCGGTTACAAGC