Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os12t0138050-00
CDS Infomation	cds chromosome:IRGSP-1.0:12:1851425:1855059:1 gene:Os12g0138050 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to EF hand family protein, expressed. (Os12t0138050-00)
Sequence	ATGATGAAGCTTGCGCATTTGTTCGGCTCTTCTTCTTCGTCTTCCTCCTCCAAGAAGGAG AACAAGGTGAGCAGCAAGAAGAGGAGGAGCGGCGCCAAGAGCTGCTCCTTCGGCTCCACC ACGTCCTCGTCGTCGTTGGCGGCGTCATCATCCGATGATTCCGCCGCCACCACGCCGAGA TCCGTGTTGCCGACGTCGGCGGCGGCGTCCTCCTCCGGCACCAAGAAGCCGGCGGCGGCG GCCGTGACGCGGGAGGACCTGGAGGTGGCCCTGCGGAGGATCGTGTCGAGCAAGGAGGAG CTGGCCGCGATGCTCGCCGAGGCGGATTACGCCGGGGAGCTCGTGCTGGAGGAGATCGCG GCCGCAGCGGCGGACGAGGGCGAGCTGAAGGAGACGTTCGCGGTGTTCGACGCCGACGGG GACGGGAGGATCTCCGCCGAGGAGCTCCGCGCCGTGCTCGCCTCGCTCGGCGACGAGCTC TGCTCCGTCGACGACTGCCGCCGCATGATCGGCGGCGTGGACACCGACGGCGACGGGTTC GTCTGCTTCGACGAGTTCGCCCGCATGATGATGTGTGGCCGCGCCGCGTCGGCGAAGACG GCGGCGAGGCGCTGGAGCGCGTGCGGCGCGTCCAGGGACGCGAGCTGCGTGATGTGCTCG AGGCAGAGGTTGGCGCGGTCGAAGGAGCCGGCGGACACCTCGGCGGCGCACTGGTAA

Peptide Sequence

PEP ID	Os12t0138050-00
PEP Infomation	pep chromosome:IRGSP-1.0:12:1851425:1855059:1 gene:Os12g0138050 transcript:Os12t0138050-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to EF hand family protein, expressed. (Os12t0138050-00)
Sequence	MMKLAHLFGSSSSSSSSKKENKVSSKKRRSGAKSCSFGSTTSSSSLAASSSDDSAATTPR SVLPTSAAASSSGTKKPAAAAVTREDLEVALRRIVSSKEELAAMLAEADYAGELVLEEIA AAAADEGELKETFAVFDADGDGRISAEELRAVLASLGDELCSVDDCRRMIGGVDTDGDGF VCFDEFARMMMCGRAASAKTAARRWSACGASRDASCVMCSRQRLARSKEPADTSAAHW

Transcript Sequence

Transcript ID	Os12t0138050-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:12:1851425:1855059:1 gene:Os12g0138050 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to EF hand family protein, expressed. (Os12t0138050-00)
Sequence	ATGATGAAGCTTGCGCATTTGTTCGGCTCTTCTTCTTCGTCTTCCTCCTCCAAGAAGGAG AACAAGGTGAGCAGCAAGAAGAGGAGGAGCGGCGCCAAGAGCTGCTCCTTCGGCTCCACC ACGTCCTCGTCGTCGTTGGCGGCGTCATCATCCGATGATTCCGCCGCCACCACGCCGAGA TCCGTGTTGCCGACGTCGGCGGCGGCGTCCTCCTCCGGCACCAAGAAGCCGGCGGCGGCG GCCGTGACGCGGGAGGACCTGGAGGTGGCCCTGCGGAGGATCGTGTCGAGCAAGGAGGAG CTGGCCGCGATGCTCGCCGAGGCGGATTACGCCGGGGAGCTCGTGCTGGAGGAGATCGCG GCCGCAGCGGCGGACGAGGGCGAGCTGAAGGAGACGTTCGCGGTGTTCGACGCCGACGGG GACGGGAGGATCTCCGCCGAGGAGCTCCGCGCCGTGCTCGCCTCGCTCGGCGACGAGCTC TGCTCCGTCGACGACTGCCGCCGCATGATCGGCGGCGTGGACACCGACGGCGACGGGTTC GTCTGCTTCGACGAGTTCGCCCGCATGATGATGTGTGGCCGCGCCGCGTCGGCGAAGACG GCGGCGAGGCGCTGGAGCGCGTGCGGCGCGTCCAGGGACGCGAGCTGCGTGATGTGCTCG AGGCAGAGGTTGGCGCGGTCGAAGGAGCCGGCGGACACCTCGGCGGCGCACTGGTAAAGC AGGCCGATCAGCCGAACGCTCTGCTGGTCATGGCTCAGCTCCTGCACCCACGACCCGTTC GACGGCGACGGCGACGGCGAGTACACCGACGACGCCGGCGATGACGTCGCCGACGAC