Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os12t0137500-01
CDS Infomation	cds chromosome:IRGSP-1.0:12:1817618:1821687:1 gene:Os12g0137500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:TAP46 description:Similar to Avr9/Cf-9 rapidly elicited protein 271 (Fragment). (Os12t0137500-01)
Sequence	ATGGTCGAGGTGGAGGAAGTCAGCAACAAGATGCAGGCGCAGATGCGCCTCCACCCCGCG GCGGCGGCGGAGGAGGAGGACGCCGACCTCCCGCTCCCTGCCCTCTTCGACAAGGCGTCC CACCTCCACTCCCTCGCCTCCAGCTCCTCCCTCGATCAGGAAGGGATCCGCAAGGGGGTC GACCTGCTGCGGCGGTGCGACGAGATGGTCAGTAAGCTCGGCCTCTTCTCCTCCAACGAG ACCAAGGATGACGTCTCCACTGCCAACCTCAAATACCTACTCGTGCCGTACTACCTTGGG GAAATGACTGAAAGGGTAGCGCAGGAAGATCGGATCCCAGTCCTTAAGGCGTCGCAGGAT CATTTGAAGGAATTCATTTCTATCTGTGAAGCACTGGAGCTTATATCAGAGGATGAGCTT GAATTGTCTAGGCAGAAGCAACCTGATACCATGGCAAATCGAAGAGCACAGAAGGTTGCA CGGTTCAAGCGCCAAAAGGCTGCAGAAACAAAGCTCCTAGAAATCAAGGAGAGGAAAGAA AGGCGTAGGCGGTCATTGAGAGCAGCTGCTTTATCAGCTCCTATTGAAGCTGGGGAGGAA GATGCTTTTGAGGATGATGGAGAGGAAGAAAGAGAGGCATGGTTAGCTACTATCTCATTG GCTCTATGCAAGGCTTTTGACCTTCTTGACATGTTAAAGAAGGAAGAAGAAATGCTTCTG GCAGTAAAAGAAAGGCAAGCGAAGGATGGTAATGCATTTGCTCGTGAAATGCTTGATGAA CGTACAAAAAAGGCTGAAGCATGGCACCATAATGCTGCCAACCGTGCACCATATTCCAAG CCAGCTGATCCAATCACTTGTGCAACATTTGCTCAAGATGTCATTGAAGGTAGAGCAAGT GTTTCACAAGCACATGAGCACAAACACCAGCCGCTGATATTTGGCCCTGCAAGTCTTGTT GGTGGAGGACTAACCAGTGAAAGAGAGAGAATGGCAGCACAAGTTTTTCAGCCAAGTTAC AGGTTGCCAACGATGAGCATAGAAGAAGCTGGCTTACGTGAGATGAAAATGATGGAGAAA TGGCAAGAAAGAACTGCTAAGATGATTCAAGAATCAAACTCCGCATGGCACAAGGATGGC AGTCGGTCAGCCCAAGAGGATGAGGACGCTGAAGAGGAGAAAGCAAGAGCATGGGATGAC TGGAAGGACGATAACCCTCGTGGTGCAGGCAACAAGAAGCTCACTCCCTGTGGCTAG

Peptide Sequence

PEP ID	Os12t0137500-01
PEP Infomation	pep chromosome:IRGSP-1.0:12:1817618:1821687:1 gene:Os12g0137500 transcript:Os12t0137500-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:TAP46 description:Similar to Avr9/Cf-9 rapidly elicited protein 271 (Fragment). (Os12t0137500-01)
Sequence	MVEVEEVSNKMQAQMRLHPAAAAEEEDADLPLPALFDKASHLHSLASSSSLDQEGIRKGV DLLRRCDEMVSKLGLFSSNETKDDVSTANLKYLLVPYYLGEMTERVAQEDRIPVLKASQD HLKEFISICEALELISEDELELSRQKQPDTMANRRAQKVARFKRQKAAETKLLEIKERKE RRRRSLRAAALSAPIEAGEEDAFEDDGEEEREAWLATISLALCKAFDLLDMLKKEEEMLL AVKERQAKDGNAFAREMLDERTKKAEAWHHNAANRAPYSKPADPITCATFAQDVIEGRAS VSQAHEHKHQPLIFGPASLVGGGLTSERERMAAQVFQPSYRLPTMSIEEAGLREMKMMEK WQERTAKMIQESNSAWHKDGSRSAQEDEDAEEEKARAWDDWKDDNPRGAGNKKLTPCG

Transcript Sequence

Transcript ID	Os12t0137500-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:12:1817618:1821687:1 gene:Os12g0137500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:TAP46 description:Similar to Avr9/Cf-9 rapidly elicited protein 271 (Fragment). (Os12t0137500-01)
Sequence	GTTTCCCGTTTCCCTTCCTTCGCGCGGCGCTGCTCCGGTAGGGTTTTTAGCCGGCGATCT CTCCCCTCTCGCGCGCTCGGCGACTGAGAATGGTCGAGGTGGAGGAAGTCAGCAACAAGA TGCAGGCGCAGATGCGCCTCCACCCCGCGGCGGCGGCGGAGGAGGAGGACGCCGACCTCC CGCTCCCTGCCCTCTTCGACAAGGCGTCCCACCTCCACTCCCTCGCCTCCAGCTCCTCCC TCGATCAGGAAGGGATCCGCAAGGGGGTCGACCTGCTGCGGCGGTGCGACGAGATGGTCA GTAAGCTCGGCCTCTTCTCCTCCAACGAGACCAAGGATGACGTCTCCACTGCCAACCTCA AATACCTACTCGTGCCGTACTACCTTGGGGAAATGACTGAAAGGGTAGCGCAGGAAGATC GGATCCCAGTCCTTAAGGCGTCGCAGGATCATTTGAAGGAATTCATTTCTATCTGTGAAG CACTGGAGCTTATATCAGAGGATGAGCTTGAATTGTCTAGGCAGAAGCAACCTGATACCA TGGCAAATCGAAGAGCACAGAAGGTTGCACGGTTCAAGCGCCAAAAGGCTGCAGAAACAA AGCTCCTAGAAATCAAGGAGAGGAAAGAAAGGCGTAGGCGGTCATTGAGAGCAGCTGCTT TATCAGCTCCTATTGAAGCTGGGGAGGAAGATGCTTTTGAGGATGATGGAGAGGAAGAAA GAGAGGCATGGTTAGCTACTATCTCATTGGCTCTATGCAAGGCTTTTGACCTTCTTGACA TGTTAAAGAAGGAAGAAGAAATGCTTCTGGCAGTAAAAGAAAGGCAAGCGAAGGATGGTA ATGCATTTGCTCGTGAAATGCTTGATGAACGTACAAAAAAGGCTGAAGCATGGCACCATA ATGCTGCCAACCGTGCACCATATTCCAAGCCAGCTGATCCAATCACTTGTGCAACATTTG CTCAAGATGTCATTGAAGGTAGAGCAAGTGTTTCACAAGCACATGAGCACAAACACCAGC CGCTGATATTTGGCCCTGCAAGTCTTGTTGGTGGAGGACTAACCAGTGAAAGAGAGAGAA TGGCAGCACAAGTTTTTCAGCCAAGTTACAGGTTGCCAACGATGAGCATAGAAGAAGCTG GCTTACGTGAGATGAAAATGATGGAGAAATGGCAAGAAAGAACTGCTAAGATGATTCAAG AATCAAACTCCGCATGGCACAAGGATGGCAGTCGGTCAGCCCAAGAGGATGAGGACGCTG AAGAGGAGAAAGCAAGAGCATGGGATGACTGGAAGGACGATAACCCTCGTGGTGCAGGCA ACAAGAAGCTCACTCCCTGTGGCTAGATTATATGCTATGGCAATTCTATTGAACTTAGAT CTGAAACTGTAGCTCTTGTAAAAATATGTGGTTTTTTACTTTCCTTACTGCGGCATTTGT TGACTGTTGAGTAATAATGTGTTCCATATGCCTATTGTAATGGTGCATGGTTTTCTTCTG CCAATATATTGGGAAGTAATGCCAAAAAAAAGCTGGTTTGAG