Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os12t0137200-01
CDS Infomation

cds chromosome:IRGSP-1.0:12:1802714:1807513:1 gene:Os12g0137200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Saccharopine dehydrogenase family protein, expressed. (Os12t0137200-01)
Sequence

ATGGCCACCGTGGTGAGGGCATGCATGCCGCTGCCACCTGCCGCCGTCGCCTCCTCATCC
GCCGCTCCCTCCACGGACGCGCAGGCGCAGAGGAGTCCCTCCTCCTCCAGCGCGCGCGTG
CTCGTGCTCGGCGGCACCGGCCGCGTCGGCGGGTCCACCGCCACCGCGCTCTCCAAGCTC
CGCCCCGACCTCAACATCCTCATCGCCGGCAGGAACCGAGAGAAAGGTGAATCTTTGGCA
TCTAAACTCGGGGAGGAATCGGAGTTTGTCCAAGTAGATATTCGCGACAGGAACATGTTG
GAGGAAGTGCTACAGGATGTGGATTTAGTTGTTCATGCTGCTGGACCTTTCCAAAGGGAG
AATGAGTGCACTGTCCTACAGGCAGCAATAGCGACCAAGACGGCATATATTGATGTTTGT
GATGATACAGACTATTCGTGGAGAGCAAAGGGTTTCCATGAACAAGCAAAAGATTGCGGT
ATCCCAGCTATTACAACTGCCGGCATCTATCCTGGAGTGAGCAATGTGATGGCTGCTGAG
CTTGTTCATGCTGCTAGAAGTGAAAATGCTGGTGAACCTGAAAGATTAAGATTCTTTTAT
TATACTGCAGGCACTGGTGGTGCTGGGCCAACAATATTAACAACTAGTTTTCTGCTTCTT
GCGGAGGATGTAATCGCATATAACAAAGGAGAAGAAATAAAGTTGAAGCCCTACAGTGGA
GCTCTCAGCATTGATTTTGGCAAAGGGGTTAGGAAGAAAGATGTTTACTTACTGAATTTG
CCTGAGGTGAAGAGTGCTTATAAGGTTTTAGGTGTGCCTACTGTTAGTGCTCGCTTCGGT
ACTGCTCCTTTTTTCTGGAATTGGGGAATGCAGGCCTTCGCAAACTTTTTACCTGTTGAA
TTCTTGAGGGATAGAAATAAGGTTCTAAAATTGGTTGGATTTGTTGATCCTTTTGTCCGA
GCTATCGATGGTATTGCTGGAGAGCGTGTTTCCATGAGAGTAGACTTAGATTGTTCAAAT
GGAAAGAATACTATTGGATTATTTTCTCATAGAAAGCTATCTGTATCGGTGGGCTATGCA
ACAGCAGCATTTGTTTTAGCAGTTCTTGAGGGCAGCACACAGCCTGGCGTATGGTTTCCA
GAGGAGCCAGAGGGAGTAGCAATTGAATCAAGGAAGGTGCTTCTTGAGCGGGCGTCTCAA
GGAACAACGATCTTCGTGATGAACAAGCCTTCCTGGATGATAGAGACTGATCCAAAGGAA
GTTGGCCTGGGAATATATGTGTAG

Peptide Sequence

PEP ID

Os12t0137200-01
PEP Infomation

pep chromosome:IRGSP-1.0:12:1802714:1807513:1 gene:Os12g0137200 transcript:Os12t0137200-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Saccharopine dehydrogenase family protein, expressed. (Os12t0137200-01)
Sequence

MATVVRACMPLPPAAVASSSAAPSTDAQAQRSPSSSSARVLVLGGTGRVGGSTATALSKL
RPDLNILIAGRNREKGESLASKLGEESEFVQVDIRDRNMLEEVLQDVDLVVHAAGPFQRE
NECTVLQAAIATKTAYIDVCDDTDYSWRAKGFHEQAKDCGIPAITTAGIYPGVSNVMAAE
LVHAARSENAGEPERLRFFYYTAGTGGAGPTILTTSFLLLAEDVIAYNKGEEIKLKPYSG
ALSIDFGKGVRKKDVYLLNLPEVKSAYKVLGVPTVSARFGTAPFFWNWGMQAFANFLPVE
FLRDRNKVLKLVGFVDPFVRAIDGIAGERVSMRVDLDCSNGKNTIGLFSHRKLSVSVGYA
TAAFVLAVLEGSTQPGVWFPEEPEGVAIESRKVLLERASQGTTIFVMNKPSWMIETDPKE
VGLGIYV

Transcript Sequence

Transcript ID

Os12t0137200-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:12:1802714:1807513:1 gene:Os12g0137200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Saccharopine dehydrogenase family protein, expressed. (Os12t0137200-01)
Sequence

AGAGCACTCTAACACCACTCGGCTATCTTCGCCGGAGGCCCGGAGCGGAGCGAGCCAAAG
AGCGAATGGCCACCGTGGTGAGGGCATGCATGCCGCTGCCACCTGCCGCCGTCGCCTCCT
CATCCGCCGCTCCCTCCACGGACGCGCAGGCGCAGAGGAGTCCCTCCTCCTCCAGCGCGC
GCGTGCTCGTGCTCGGCGGCACCGGCCGCGTCGGCGGGTCCACCGCCACCGCGCTCTCCA
AGCTCCGCCCCGACCTCAACATCCTCATCGCCGGCAGGAACCGAGAGAAAGGTGAATCTT
TGGCATCTAAACTCGGGGAGGAATCGGAGTTTGTCCAAGTAGATATTCGCGACAGGAACA
TGTTGGAGGAAGTGCTACAGGATGTGGATTTAGTTGTTCATGCTGCTGGACCTTTCCAAA
GGGAGAATGAGTGCACTGTCCTACAGGCAGCAATAGCGACCAAGACGGCATATATTGATG
TTTGTGATGATACAGACTATTCGTGGAGAGCAAAGGGTTTCCATGAACAAGCAAAAGATT
GCGGTATCCCAGCTATTACAACTGCCGGCATCTATCCTGGAGTGAGCAATGTGATGGCTG
CTGAGCTTGTTCATGCTGCTAGAAGTGAAAATGCTGGTGAACCTGAAAGATTAAGATTCT
TTTATTATACTGCAGGCACTGGTGGTGCTGGGCCAACAATATTAACAACTAGTTTTCTGC
TTCTTGCGGAGGATGTAATCGCATATAACAAAGGAGAAGAAATAAAGTTGAAGCCCTACA
GTGGAGCTCTCAGCATTGATTTTGGCAAAGGGGTTAGGAAGAAAGATGTTTACTTACTGA
ATTTGCCTGAGGTGAAGAGTGCTTATAAGGTTTTAGGTGTGCCTACTGTTAGTGCTCGCT
TCGGTACTGCTCCTTTTTTCTGGAATTGGGGAATGCAGGCCTTCGCAAACTTTTTACCTG
TTGAATTCTTGAGGGATAGAAATAAGGTTCTAAAATTGGTTGGATTTGTTGATCCTTTTG
TCCGAGCTATCGATGGTATTGCTGGAGAGCGTGTTTCCATGAGAGTAGACTTAGATTGTT
CAAATGGAAAGAATACTATTGGATTATTTTCTCATAGAAAGCTATCTGTATCGGTGGGCT
ATGCAACAGCAGCATTTGTTTTAGCAGTTCTTGAGGGCAGCACACAGCCTGGCGTATGGT
TTCCAGAGGAGCCAGAGGGAGTAGCAATTGAATCAAGGAAGGTGCTTCTTGAGCGGGCGT
CTCAAGGAACAACGATCTTCGTGATGAACAAGCCTTCCTGGATGATAGAGACTGATCCAA
AGGAAGTTGGCCTGGGAATATATGTGTAGGGGAATAGTATGTTTCCCTCACTATATGTCT
ATATTGAAGTTTACAGCTCCTAATTATAATTTTGACGGTGAAATCTTAGCACTTACTACA
AAGTTCTTGGGTATGAGTAAGAGCAAGAGCGACAAATAGGACAGGGCAATGAACAAGTAA
ATTCTTATCCATTTTCAACAAGGCACCTCTGTCTCTTTGTTAATCGCACTGTTCTGAATG
TGGCTGTAAATAATAGAACGAATTTGTAATGCTCTAAGAGTATGGGGTGGATGAATGAAA
TGAATTGGAGCACAATACAACCAAACGAGGGTTACAGTTTTGATG