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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os12t0136200-03
CDS Infomation

cds chromosome:IRGSP-1.0:12:1757970:1759670:1 gene:Os12g0136200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to RNA recognition motif family protein, expressed. (Os12t0136200-01);Similar to RNA recognition motif family protein, expressed. (Os12t0136200-02);Similar to RNA recognition motif family protein, expressed. (Os12t0136200-03)
Sequence

AGTTGGACAGATGATGATTTCAGAAAGGTTGTGGAGGAAGTTGGTCCAGGAGTATTAAAA
GCTGATCTCATGAAGGTCTCAAGTGCAAATCGCAATCGGGGTTATGGTTTTGTTGAATAC
TACAACCATGCATGTGCAGAGTATGCAAGGCAGGAGATGTCTTCCCCAACATTCAAACTA
GATTCAAATGCTCCTACAGTCAGCTGGGCAGATCCTAAGAATAACGACTCGGCCTCTACT
TCTCAGGTTAAATCTGTATATGTGAAAAATCTGCCCAAGAATGTTACTCAAGCACAGCTG
AAAAGGCTGTTTGAGCACCATGGTGAAATTGAAAAGGTTGTTCTTCCTCCTTCAAGAGGA
GGTCATGATAATAGGTATGGTTTTGTTCACTTTAAGGACAGATCCATGGCCATGAGGGCT
CTGCAGAACACAGAGAGATATGAGCTTGATGGTCAGGTCCTGGATTGCTCACTTGCGAAA
CCTCCTGCTGCTGATAAGAAGGATGATAGAGTACCACTACCTAGTTCAAATGGAGCTCCA
TTGCTCCCGAGTTATCCTCCACTTGGATATGGTATCATGTCAGTACCAGGTGCCTATGGT
GCTGCTCCTGCTAGTACTGCACAGCCTATGCTGTATGCTCCAAGAGCTCCTCCAGGTGCA
GCAATGGTTCCAATGATGTTACCGGATGGTCGTCTCGTATATGTTGTACAACAGCCTGGT
GGACAGTTGCCGCTGGCTTCGCCGCCGCCGCAGCAAGCTGGACATCGTAGCGGCAGTGGA
GGACGTCATGGCGGCAGTGGCGGCCGCTATGGCGGTGGTGGTGGCAGCTCCGGCAGTAGC
AGGCCAGGTGCAAAGCGGCAGAGAGGAGACGACAACAGCAGTAGCCGCCACAAAGGCCGG
CGCCGCCCGTACTGA

Peptide Sequence

PEP ID

Os12t0136200-03
PEP Infomation

pep chromosome:IRGSP-1.0:12:1757970:1759670:1 gene:Os12g0136200 transcript:Os12t0136200-03 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to RNA recognition motif family protein, expressed. (Os12t0136200-01);Similar to RNA recognition motif family protein, expressed. (Os12t0136200-02);Similar to RNA recognition motif family protein, expressed. (Os12t0136200-03)
Sequence

SWTDDDFRKVVEEVGPGVLKADLMKVSSANRNRGYGFVEYYNHACAEYARQEMSSPTFKL
DSNAPTVSWADPKNNDSASTSQVKSVYVKNLPKNVTQAQLKRLFEHHGEIEKVVLPPSRG
GHDNRYGFVHFKDRSMAMRALQNTERYELDGQVLDCSLAKPPAADKKDDRVPLPSSNGAP
LLPSYPPLGYGIMSVPGAYGAAPASTAQPMLYAPRAPPGAAMVPMMLPDGRLVYVVQQPG
GQLPLASPPPQQAGHRSGSGGRHGGSGGRYGGGGGSSGSSRPGAKRQRGDDNSSSRHKGR
RRPY

Transcript Sequence

Transcript ID

Os12t0136200-03
Transcript Infomation

cdna chromosome:IRGSP-1.0:12:1757970:1759670:1 gene:Os12g0136200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to RNA recognition motif family protein, expressed. (Os12t0136200-01);Similar to RNA recognition motif family protein, expressed. (Os12t0136200-02);Similar to RNA recognition motif family protein, expressed. (Os12t0136200-03)
Sequence

TAGTTGGACAGATGATGATTTCAGAAAGGTTGTGGAGGAAGTTGGTCCAGGAGTATTAAA
AGCTGATCTCATGAAGGTCTCAAGTGCAAATCGCAATCGGGGTTATGGTTTTGTTGAATA
CTACAACCATGCATGTGCAGAGTATGCAAGGCAGGAGATGTCTTCCCCAACATTCAAACT
AGATTCAAATGCTCCTACAGTCAGCTGGGCAGATCCTAAGAATAACGACTCGGCCTCTAC
TTCTCAGGTTAAATCTGTATATGTGAAAAATCTGCCCAAGAATGTTACTCAAGCACAGCT
GAAAAGGCTGTTTGAGCACCATGGTGAAATTGAAAAGGTTGTTCTTCCTCCTTCAAGAGG
AGGTCATGATAATAGGTATGGTTTTGTTCACTTTAAGGACAGATCCATGGCCATGAGGGC
TCTGCAGAACACAGAGAGATATGAGCTTGATGGTCAGGTCCTGGATTGCTCACTTGCGAA
ACCTCCTGCTGCTGATAAGAAGGATGATAGAGTACCACTACCTAGTTCAAATGGAGCTCC
ATTGCTCCCGAGTTATCCTCCACTTGGATATGGTATCATGTCAGTACCAGGTGCCTATGG
TGCTGCTCCTGCTAGTACTGCACAGCCTATGCTGTATGCTCCAAGAGCTCCTCCAGGTGC
AGCAATGGTTCCAATGATGTTACCGGATGGTCGTCTCGTATATGTTGTACAACAGCCTGG
TGGACAGTTGCCGCTGGCTTCGCCGCCGCCGCAGCAAGCTGGACATCGTAGCGGCAGTGG
AGGACGTCATGGCGGCAGTGGCGGCCGCTATGGCGGTGGTGGTGGCAGCTCCGGCAGTAG
CAGGCCAGGTGCAAAGCGGCAGAGAGGAGACGACAACAGCAGTAGCCGCCACAAAGGCCG
GCGCCGCCCGTACTGATCTGATCAGCATAGCTGTAGCTACCACTTAGAAGATGTAGTGTC
GTTGCAGAAAATTACCAGAAAATCTGGTAGAAATAATTTATACTGTTTGTACTCGTCGAT
TTATTAGAGGAATGCGTTTCTGAAACAAGACTGTACATGCGTATTTTACCTGTATCGCAG
AGTGCTGAATCTGATGGTGCACTGGTACAGTATAAGCCAGTTTCAGGTCTCTTTGTAAGC
CTGTTTT