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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os12t0135900-00
CDS Infomation

cds chromosome:IRGSP-1.0:12:1747416:1749901:-1 gene:Os12g0135900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to 50S ribosomal protein L24. (Os12t0135900-00)
Sequence

ATGGGGTGGAAGGCTGCGGAGAAGCTCATCAGACACTGGAAGATCCTCCGCGGTGACAAC
GTGATGATCATAAGAGGCAAGGACAAGGGGGAGAGCGGGCTCATCAAGCGGGTCATTCGG
TCGCAGAACCGTGTCATCGTCGAGGGAAAGAATTTGGTTAAGAAACATATTAAGCAAGGA
GAAGGACATACAGGTGGGATTTTCTCAATTGAAGCTCCACTTCATGTTTCAAATGTTCAA
GTACTTGATCCAGTCACTGGGAAACCATGTAAGATTGGATACAAGTATTTGGAAGATGGA
ACTAAAGTCAGGTTTGCTAGAGGAATGAATGCATCTGGTGCTGTGATACCCAGGCCAGAA
ATTTTGAAGGAGCGAAGAAAGCCAAGACCTACATCACCTGGCCCAAAGGATACACGAATT
GAACATGTGCTGGAGAAAACCTATGATGCCAAGGCTGGAATTGGGATGCCTGATCTATAG

Peptide Sequence

PEP ID

Os12t0135900-00
PEP Infomation

pep chromosome:IRGSP-1.0:12:1747416:1749901:-1 gene:Os12g0135900 transcript:Os12t0135900-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to 50S ribosomal protein L24. (Os12t0135900-00)
Sequence

MGWKAAEKLIRHWKILRGDNVMIIRGKDKGESGLIKRVIRSQNRVIVEGKNLVKKHIKQG
EGHTGGIFSIEAPLHVSNVQVLDPVTGKPCKIGYKYLEDGTKVRFARGMNASGAVIPRPE
ILKERRKPRPTSPGPKDTRIEHVLEKTYDAKAGIGMPDL

Transcript Sequence

Transcript ID

Os12t0135900-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:12:1747416:1749901:-1 gene:Os12g0135900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to 50S ribosomal protein L24. (Os12t0135900-00)
Sequence

ATGGGGTGGAAGGCTGCGGAGAAGCTCATCAGACACTGGAAGATCCTCCGCGGTGACAAC
GTGATGATCATAAGAGGCAAGGACAAGGGGGAGAGCGGGCTCATCAAGCGGGTCATTCGG
TCGCAGAACCGTGTCATCGTCGAGGGAAAGAATTTGGTTAAGAAACATATTAAGCAAGGA
GAAGGACATACAGGTGGGATTTTCTCAATTGAAGCTCCACTTCATGTTTCAAATGTTCAA
GTACTTGATCCAGTCACTGGGAAACCATGTAAGATTGGATACAAGTATTTGGAAGATGGA
ACTAAAGTCAGGTTTGCTAGAGGAATGAATGCATCTGGTGCTGTGATACCCAGGCCAGAA
ATTTTGAAGGAGCGAAGAAAGCCAAGACCTACATCACCTGGCCCAAAGGATACACGAATT
GAACATGTGCTGGAGAAAACCTATGATGCCAAGGCTGGAATTGGGATGCCTGATCTATAG