Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os12t0135800-01
CDS Infomation

cds chromosome:IRGSP-1.0:12:1745261:1746538:1 gene:Os12g0135800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Alpha/beta hydrolase fold-3 domain containing protein. (Os12t0135800-01)
Sequence

ATGGCAACATTGCCACAAATGGCCGCGACCAAGGAGCGTCAAGAGGCGGCTAACCCGACC
ACGACGACCAGGACGCTGGTCGAGTCCGTCACCAACTGGATCCGCGTCTACTCCGACGGC
TCCGTCGACCGCCTCGGCCCGCCGGAAGCCGCCGCGTTCATGGTCCTCGTCCCGCCGTAC
GACGACCCACGGGACGGGGTCACCGTCCACGACGTCGCCACGGACCATGGCGTCGACGTC
CGCCTGTACCTGACGACGACGACGCCGGCCGGGCGCCGCCCTGTTCTCGTCCATTTCCAC
GGCGGCGGCTTCTGCTTGTCCCACGCCGCGTGGTCGCTCTACCACCGCTTCTACGCCCGC
CTCGCCGTGGAGCTCGACGTCGCGGGCATCGTCTCCGTCGTCCTCCCGCTCGCGCCGGAG
CACCGCCTCCCCGCCGCCATCGACGCCGGACACGCCGCGCTGCTCTGGCTCCGTGACGTC
GCGTGCGGCACCAGCGACACCATCGCGCACCATGCGGTCGAACGCCTTCGCGACGCCGCC
GACTTCTCCCGCGTGTTCCTCATCGGCGACAGCGCGGGCGGCGTCCTCGTGCACAACGTG
GCGGCACGCGCCGGCGAGGCTGGGGCCGAGGCTCTCGACCCGATACGCCTCGCCGGCGGT
GTCCTCCTCCACCCGGGCTTCATCTTGCCGGAGAAGAGCCCGTCGGAGCTGGAGAACCCT
CCCACGCCGTTCATGACGCAGGAGACGGTGGACAAGTTCGTCATGCTCGCGTTGCCGGTG
GGAACCACCAGCAGGGACCACCCGTACACGTCTCCGGCGGCGGCGGTGACGGCGGCGGAG
GGAGCCCAGCTGCCGCCGATGCTGGTGATGGTCGCGGAGGAGGACATGCTCCGCGACGCG
CAGGTGGAGTACGGCGAGGCCATGGCGCGCGCGGGCAAGGCAGTGGAAACGGTGGTCAGC
CACGGCCGCGGGATCGGCCACGTGTTCTACCTCAACTGGTTCGCCGTGGAGTCCCACCCC
GTCGCGGCGGCGCGGGCGCGGGAGCTCGTCGACGCCGTCAAGAGCTTCGTCGATAGCCAC
TGA

Peptide Sequence

PEP ID

Os12t0135800-01
PEP Infomation

pep chromosome:IRGSP-1.0:12:1745261:1746538:1 gene:Os12g0135800 transcript:Os12t0135800-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Alpha/beta hydrolase fold-3 domain containing protein. (Os12t0135800-01)
Sequence

MATLPQMAATKERQEAANPTTTTRTLVESVTNWIRVYSDGSVDRLGPPEAAAFMVLVPPY
DDPRDGVTVHDVATDHGVDVRLYLTTTTPAGRRPVLVHFHGGGFCLSHAAWSLYHRFYAR
LAVELDVAGIVSVVLPLAPEHRLPAAIDAGHAALLWLRDVACGTSDTIAHHAVERLRDAA
DFSRVFLIGDSAGGVLVHNVAARAGEAGAEALDPIRLAGGVLLHPGFILPEKSPSELENP
PTPFMTQETVDKFVMLALPVGTTSRDHPYTSPAAAVTAAEGAQLPPMLVMVAEEDMLRDA
QVEYGEAMARAGKAVETVVSHGRGIGHVFYLNWFAVESHPVAAARARELVDAVKSFVDSH

Transcript Sequence

Transcript ID

Os12t0135800-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:12:1745261:1746538:1 gene:Os12g0135800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Alpha/beta hydrolase fold-3 domain containing protein. (Os12t0135800-01)
Sequence

ACATTTTCACTGCTACGTACTCGATCATCTGGCCAGCTGCTGCCATGGCAACATTGCCAC
AAATGGCCGCGACCAAGGAGCGTCAAGAGGCGGCTAACCCGACCACGACGACCAGGACGC
TGGTCGAGTCCGTCACCAACTGGATCCGCGTCTACTCCGACGGCTCCGTCGACCGCCTCG
GCCCGCCGGAAGCCGCCGCGTTCATGGTCCTCGTCCCGCCGTACGACGACCCACGGGACG
GGGTCACCGTCCACGACGTCGCCACGGACCATGGCGTCGACGTCCGCCTGTACCTGACGA
CGACGACGCCGGCCGGGCGCCGCCCTGTTCTCGTCCATTTCCACGGCGGCGGCTTCTGCT
TGTCCCACGCCGCGTGGTCGCTCTACCACCGCTTCTACGCCCGCCTCGCCGTGGAGCTCG
ACGTCGCGGGCATCGTCTCCGTCGTCCTCCCGCTCGCGCCGGAGCACCGCCTCCCCGCCG
CCATCGACGCCGGACACGCCGCGCTGCTCTGGCTCCGTGACGTCGCGTGCGGCACCAGCG
ACACCATCGCGCACCATGCGGTCGAACGCCTTCGCGACGCCGCCGACTTCTCCCGCGTGT
TCCTCATCGGCGACAGCGCGGGCGGCGTCCTCGTGCACAACGTGGCGGCACGCGCCGGCG
AGGCTGGGGCCGAGGCTCTCGACCCGATACGCCTCGCCGGCGGTGTCCTCCTCCACCCGG
GCTTCATCTTGCCGGAGAAGAGCCCGTCGGAGCTGGAGAACCCTCCCACGCCGTTCATGA
CGCAGGAGACGGTGGACAAGTTCGTCATGCTCGCGTTGCCGGTGGGAACCACCAGCAGGG
ACCACCCGTACACGTCTCCGGCGGCGGCGGTGACGGCGGCGGAGGGAGCCCAGCTGCCGC
CGATGCTGGTGATGGTCGCGGAGGAGGACATGCTCCGCGACGCGCAGGTGGAGTACGGCG
AGGCCATGGCGCGCGCGGGCAAGGCAGTGGAAACGGTGGTCAGCCACGGCCGCGGGATCG
GCCACGTGTTCTACCTCAACTGGTTCGCCGTGGAGTCCCACCCCGTCGCGGCGGCGCGGG
CGCGGGAGCTCGTCGACGCCGTCAAGAGCTTCGTCGATAGCCACTGAATCGATTCCAAGT
TTGAATCGGTGTCTGCTTCTATGTCTGAATTTGTGTCGAAATCCTGTATCCATCTCACCG
TCACGTAGTACATGTCTACATCGCAATGTCTCTGTAGTTAAACAAGTTTCCCGCGCAATG
CATACGTGTTTTCGTTTC