Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os12t0133900-01
CDS Infomation	cds chromosome:IRGSP-1.0:12:1663836:1668952:-1 gene:Os12g0133900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Epa4p. (Os12t0133900-01)
Sequence	ATGGCGATGGATTTGGACGAGCCGCTCGACGCGGAGAAGGGCGAGGCGGCGCTGCGGCGG CTGCGCGACGCCGACCCGGCCCTCTACCTCTCCCCCTCCGCCGACCTCGCCGCCGCCGCC CGTGAGGCCTCCAAGCACCTCTACGCCTCGCTCGTCCCCTTCTCCCCCGCGCAGCCGCCC CCGCTCTCCAACCTCCTCGCAGGCCCCGCCTTCGACGCCGAGCAGATTTGGTCCCAGATT GAGCTGCTCTCCCGCCCCCTCATCCCCCACCTGCGCCGCCAGCTCCGCCGCCTCGAGAAG CAACCCCCGTCTCAGCCGCCGCCTCGTACGGAATCGAAGTCCGCTGATGCCGAAGAGAAG TCAGAGGAGGAGGACGAGGAGGATGGTGAAGGTGACGAAGAATTGGAGGAGTTGGACGAT GTAGATGATGAAGAGGAGTCAGAGGAGGAGGAAGAGGAAGAGGAAGAAGACAAAGAAGGA TTGGAGGATAAAGCAGGGAATCAAGTGGAGGACGAGTTCTTCAAGATAAAGGATCTCGAT AAGTTCATGGTAAAGGGGGAGGAGGCGGAATATGGTGGGGGTGCCAAGCAAGGGAAGAAG AAGAAGAAAACAGAGAACTGGATGGAAGAAGATAGTGATGAGGAGGAAGAGGAGGACCTT GATGAGGATGAGGACAATGAGGATGAAGAAGATGACGATGAACACTTGGACTTGGAAGAC TTTGACGATGAAGAAGAAGAAGAAGAGGGTGCAGTTGGAGATATAATGTATAAGGATTTT TTTGAGGAAGCTGATGACCAAAAAGTAAGGAAGAAAGGTGGCTCCAAGAAAGTTCAATTC AAGGATGAACCAGATGAACCAGAAGTTGATGACAAAAATGATGATGGAAATGATGAACAG GGTTTGTCAACTCACGAGAAGGCGCGCCTGAAGATGCATGCTAAAATAGAGGAAATGGAG AAAGCTAATCTTGAACCTAGTATGTGGACCATGCAGGGAGAGGTTAATGCTTCCAGCAGA CCCAAAAACAGTGCTCTAGAAGTGGACCTTGATTTTGAGCACAATGTAAGACCTGCCCCA GTAATCACTGAGGAAGTCACTGCTTCTCTTGAAGAGATGATAAAGAAAAGAATAATAGAG GGTCATTTTGACGATGTTGAAAAGCCTTCTCCCTTGCAATTTAAATCCCCAAAGGAACAA AAGGATCTGGACGAAAGTAAGAGCAAGAAGGGTCTTGCTGAACTATATGAGGACGATTAT GCGCAAAAGGCTGGCCTTGCACCTGCACCACTTTCTATTTCAGATGAACTTAAGAACGAG GCAAATACCTTATTTAAGAGAATATGCTTGAAGTTGGATGCACTATCTCATTTCCACTTT GCTCCAAAGCCGGTCATTGAAGATATGTCTATACAAGCAAATGTACCAGCTCTAGCAATG GAGGAGATTGCACCTGTAGCTGTTTCAGATGCTGCAATGCTTGCTCCTGAAGAAATTTTT GAAGGAAAAGGTGATGTTAAAGAAGAAGCAGAACTTACACAAGCTGAGCGCAGAAGAAGA AGAGCTAACAAGAAAAGGAGATATGCAGGATCGCATAAGGAGAGGCCAGCCAAGATGCAG AAAGATTAA

Peptide Sequence

PEP ID	Os12t0133900-01
PEP Infomation	pep chromosome:IRGSP-1.0:12:1663836:1668952:-1 gene:Os12g0133900 transcript:Os12t0133900-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Epa4p. (Os12t0133900-01)
Sequence	MAMDLDEPLDAEKGEAALRRLRDADPALYLSPSADLAAAAREASKHLYASLVPFSPAQPP PLSNLLAGPAFDAEQIWSQIELLSRPLIPHLRRQLRRLEKQPPSQPPPRTESKSADAEEK SEEEDEEDGEGDEELEELDDVDDEEESEEEEEEEEEDKEGLEDKAGNQVEDEFFKIKDLD KFMVKGEEAEYGGGAKQGKKKKKTENWMEEDSDEEEEEDLDEDEDNEDEEDDDEHLDLED FDDEEEEEEGAVGDIMYKDFFEEADDQKVRKKGGSKKVQFKDEPDEPEVDDKNDDGNDEQ GLSTHEKARLKMHAKIEEMEKANLEPSMWTMQGEVNASSRPKNSALEVDLDFEHNVRPAP VITEEVTASLEEMIKKRIIEGHFDDVEKPSPLQFKSPKEQKDLDESKSKKGLAELYEDDY AQKAGLAPAPLSISDELKNEANTLFKRICLKLDALSHFHFAPKPVIEDMSIQANVPALAM EEIAPVAVSDAAMLAPEEIFEGKGDVKEEAELTQAERRRRRANKKRRYAGSHKERPAKMQ KD

Transcript Sequence

Transcript ID	Os12t0133900-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:12:1663836:1668952:-1 gene:Os12g0133900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Epa4p. (Os12t0133900-01)
Sequence	CCTCCGCCTCCGCCTCCGGTCTCCCCTCTCCTCACACGCTCCGGCTCCGACGGACGATTC CCACCCAGTAATGGCGATGGATTTGGACGAGCCGCTCGACGCGGAGAAGGGCGAGGCGGC GCTGCGGCGGCTGCGCGACGCCGACCCGGCCCTCTACCTCTCCCCCTCCGCCGACCTCGC CGCCGCCGCCCGTGAGGCCTCCAAGCACCTCTACGCCTCGCTCGTCCCCTTCTCCCCCGC GCAGCCGCCCCCGCTCTCCAACCTCCTCGCAGGCCCCGCCTTCGACGCCGAGCAGATTTG GTCCCAGATTGAGCTGCTCTCCCGCCCCCTCATCCCCCACCTGCGCCGCCAGCTCCGCCG CCTCGAGAAGCAACCCCCGTCTCAGCCGCCGCCTCGTACGGAATCGAAGTCCGCTGATGC CGAAGAGAAGTCAGAGGAGGAGGACGAGGAGGATGGTGAAGGTGACGAAGAATTGGAGGA GTTGGACGATGTAGATGATGAAGAGGAGTCAGAGGAGGAGGAAGAGGAAGAGGAAGAAGA CAAAGAAGGATTGGAGGATAAAGCAGGGAATCAAGTGGAGGACGAGTTCTTCAAGATAAA GGATCTCGATAAGTTCATGGTAAAGGGGGAGGAGGCGGAATATGGTGGGGGTGCCAAGCA AGGGAAGAAGAAGAAGAAAACAGAGAACTGGATGGAAGAAGATAGTGATGAGGAGGAAGA GGAGGACCTTGATGAGGATGAGGACAATGAGGATGAAGAAGATGACGATGAACACTTGGA CTTGGAAGACTTTGACGATGAAGAAGAAGAAGAAGAGGGTGCAGTTGGAGATATAATGTA TAAGGATTTTTTTGAGGAAGCTGATGACCAAAAAGTAAGGAAGAAAGGTGGCTCCAAGAA AGTTCAATTCAAGGATGAACCAGATGAACCAGAAGTTGATGACAAAAATGATGATGGAAA TGATGAACAGGGTTTGTCAACTCACGAGAAGGCGCGCCTGAAGATGCATGCTAAAATAGA GGAAATGGAGAAAGCTAATCTTGAACCTAGTATGTGGACCATGCAGGGAGAGGTTAATGC TTCCAGCAGACCCAAAAACAGTGCTCTAGAAGTGGACCTTGATTTTGAGCACAATGTAAG ACCTGCCCCAGTAATCACTGAGGAAGTCACTGCTTCTCTTGAAGAGATGATAAAGAAAAG AATAATAGAGGGTCATTTTGACGATGTTGAAAAGCCTTCTCCCTTGCAATTTAAATCCCC AAAGGAACAAAAGGATCTGGACGAAAGTAAGAGCAAGAAGGGTCTTGCTGAACTATATGA GGACGATTATGCGCAAAAGGCTGGCCTTGCACCTGCACCACTTTCTATTTCAGATGAACT TAAGAACGAGGCAAATACCTTATTTAAGAGAATATGCTTGAAGTTGGATGCACTATCTCA TTTCCACTTTGCTCCAAAGCCGGTCATTGAAGATATGTCTATACAAGCAAATGTACCAGC TCTAGCAATGGAGGAGATTGCACCTGTAGCTGTTTCAGATGCTGCAATGCTTGCTCCTGA AGAAATTTTTGAAGGAAAAGGTGATGTTAAAGAAGAAGCAGAACTTACACAAGCTGAGCG CAGAAGAAGAAGAGCTAACAAGAAAAGGAGATATGCAGGATCGCATAAGGAGAGGCCAGC CAAGATGCAGAAAGATTAACTCAATACTGGGGAAACGCTTACATTATGAACAAGTAGTCA GCCATTTTTACTGTTCAGCATTACCTCCTGACCCAAGGATCCATTCATGATGAGTATTGT GCAAATGGCAACGCAGCATTGACAGACATGGAGGCAGAGAGCAGGCTAGGAAAGGTAGGG TGAAGGGTTGGGCTCCAATGCTTTTGATCACAGGATCTGTACTCTGGTGGCACAACAGAC AGACAGCTGTTCCAGGTCAAAGACCCTGACGTAACCCATCTCCCGTCCCACAAGAAAAGG CGAGCGAACGTATTGGAATGTGGGATGGGTAAAAGAAATCTTTTGTTTCTTGTTACACTA GTCGTAGTAGTAGTGTAGTAATGCAATTTTACAATATCATTTTTTACACTATAGAGTATC AATGGAGTGCATGTATTCAGAGGC