Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os12t0133700-00
CDS Infomation	cds chromosome:IRGSP-1.0:12:1652592:1655199:-1 gene:Os12g0133700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Protein phosphatase 125 description:Similar to Dual specificity protein phosphatase 19 (EC 3.1.3.48) (EC 3.1.3.16) (Stress-activated protein kinase pathway-regulating phosphatase 1) (Protein phosphatase SKRP1). Splice isoform 2. (Os12t0133700-00)
Sequence	ATGCCGCACCTCGTCCGCGAGCGCCTCTTCTTCGGCGACATCAACGACGCCATCGCCGCG CTCACCACCACCACCGCGGAAGCCGGCGGCTTCACCCACCTCCTCTCCGTCGTCAGCTCC GCCTTCATCTCCTTCATCACCGACTGCCGCCCGGGCCTCTCCATCCCCACCGAGGAGGTC CGCCGCGTGGTCGCCGGGGAGGAGGGCGCGCCGCCGGTCTCCGCCGTGGCCCCCGGGCGG CTGATGCGAGTGGTGGAGCGCGCTGGGGTCGGGCTGCGGGTCACGCGGATGGCCGTGCCG CTGCGGGACACCGAGGAGGAGAACCTGCTCGATCACCTCGAGCCGTGTCTTGATTTCATC GATGAGGGCAGGAAGGAGGGGAACGTCCTTGTCCATTGCTTTGCTGGGGTCTCCAGGAGT GCTACCATCATCGTTGCTTATCTTATGAGAACAGAACAAAAATCTCTGGAAGAAGCACTA GAGTCTCTTAAGGAAGTCAATGAGTCAGCCTGCCCAAATGACGGTTTTCTTGAGCAGTTG AAACTGTTTGAAGAAATGGGCTTCAAAGTTGATACTTCAAGTCCTCTATACAAGCGTTTC CGTTTAAAATTGCTAGGCCAATCCTACAAAATTGGAGAGAAAATAGGAAGCTATGTATTT GAAGATGATCCTGGTCTTTCTGGACAGCCTAATTCTTCTACTCAGAATTTACCAAACAAG CAAACCCAACAACCAGCATACCGCTGCAAAAAATGCAGGAGAATTATTGCTGTGCAGGGC AATGTTGTGAGCCACACTCCTGGTGAGGGTGAATCTTGCTTTCAGTGGCAAAACAAGAGA AAAGGAGAGCGATCATATAGCAAAGAACAAGATTGCTCATCGTTGTTTGTTGAGCCTCTG AAGTGGATGACTCCAGTGGAAGATGGTGCTTTGGAGGGGAAGCTATCGTGTATCCACTGC GGAGCACGGCTAGGATATTTCAACTGGTCAGGAATCCAGTGCAACTGTGGCAGTTGGATC ACCCCAGCCTTCCAAATTTCCAAGAGCAAAGTTGATATTAGTACCACTTAG

Peptide Sequence

PEP ID	Os12t0133700-00
PEP Infomation	pep chromosome:IRGSP-1.0:12:1652592:1655199:-1 gene:Os12g0133700 transcript:Os12t0133700-00 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Protein phosphatase 125 description:Similar to Dual specificity protein phosphatase 19 (EC 3.1.3.48) (EC 3.1.3.16) (Stress-activated protein kinase pathway-regulating phosphatase 1) (Protein phosphatase SKRP1). Splice isoform 2. (Os12t0133700-00)
Sequence	MPHLVRERLFFGDINDAIAALTTTTAEAGGFTHLLSVVSSAFISFITDCRPGLSIPTEEV RRVVAGEEGAPPVSAVAPGRLMRVVERAGVGLRVTRMAVPLRDTEEENLLDHLEPCLDFI DEGRKEGNVLVHCFAGVSRSATIIVAYLMRTEQKSLEEALESLKEVNESACPNDGFLEQL KLFEEMGFKVDTSSPLYKRFRLKLLGQSYKIGEKIGSYVFEDDPGLSGQPNSSTQNLPNK QTQQPAYRCKKCRRIIAVQGNVVSHTPGEGESCFQWQNKRKGERSYSKEQDCSSLFVEPL KWMTPVEDGALEGKLSCIHCGARLGYFNWSGIQCNCGSWITPAFQISKSKVDISTT

Transcript Sequence

Transcript ID	Os12t0133700-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:12:1652592:1655199:-1 gene:Os12g0133700 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Protein phosphatase 125 description:Similar to Dual specificity protein phosphatase 19 (EC 3.1.3.48) (EC 3.1.3.16) (Stress-activated protein kinase pathway-regulating phosphatase 1) (Protein phosphatase SKRP1). Splice isoform 2. (Os12t0133700-00)
Sequence	ATTGCGGCACTGAAACTCAGGCGGCGCCACCAGCCAGCGTACCACGACGTTGCTCTGCTA GGGTTTGCTCCACCCTCCTCCCACCTCGCGCCATCGGATTCCACCTTCCCAGGTCTCCCT CCCCTCCCGTCGCCATGCCGCACCTCGTCCGCGAGCGCCTCTTCTTCGGCGACATCAACG ACGCCATCGCCGCGCTCACCACCACCACCGCGGAAGCCGGCGGCTTCACCCACCTCCTCT CCGTCGTCAGCTCCGCCTTCATCTCCTTCATCACCGACTGCCGCCCGGGCCTCTCCATCC CCACCGAGGAGGTCCGCCGCGTGGTCGCCGGGGAGGAGGGCGCGCCGCCGGTCTCCGCCG TGGCCCCCGGGCGGCTGATGCGAGTGGTGGAGCGCGCTGGGGTCGGGCTGCGGGTCACGC GGATGGCCGTGCCGCTGCGGGACACCGAGGAGGAGAACCTGCTCGATCACCTCGAGCCGT GTCTTGATTTCATCGATGAGGGCAGGAAGGAGGGGAACGTCCTTGTCCATTGCTTTGCTG GGGTCTCCAGGAGTGCTACCATCATCGTTGCTTATCTTATGAGAACAGAACAAAAATCTC TGGAAGAAGCACTAGAGTCTCTTAAGGAAGTCAATGAGTCAGCCTGCCCAAATGACGGTT TTCTTGAGCAGTTGAAACTGTTTGAAGAAATGGGCTTCAAAGTTGATACTTCAAGTCCTC TATACAAGCGTTTCCGTTTAAAATTGCTAGGCCAATCCTACAAAATTGGAGAGAAAATAG GAAGCTATGTATTTGAAGATGATCCTGGTCTTTCTGGACAGCCTAATTCTTCTACTCAGA ATTTACCAAACAAGCAAACCCAACAACCAGCATACCGCTGCAAAAAATGCAGGAGAATTA TTGCTGTGCAGGGCAATGTTGTGAGCCACACTCCTGGTGAGGGTGAATCTTGCTTTCAGT GGCAAAACAAGAGAAAAGGAGAGCGATCATATAGCAAAGAACAAGATTGCTCATCGTTGT TTGTTGAGCCTCTGAAGTGGATGACTCCAGTGGAAGATGGTGCTTTGGAGGGGAAGCTAT CGTGTATCCACTGCGGAGCACGGCTAGGATATTTCAACTGGTCAGGAATCCAGTGCAACT GTGGCAGTTGGATCACCCCAGCCTTCCAAATTTCCAAGAGCAAAGTTGATATTAGTACCA CTTAGATAGTTGTCAGAGGCTAGTAGATTATTTCAGGACCATGTGAGCTGGTGTAAATAC CGTTTTATCAGAAGGATTTACGAACTCGAAGGATCTCGACCGAAGATTTTCAGATCCATT GTGCACTAGATAGATACCATGAAGAAATATAGTCTCAGAAACCACCACTTGTATTGCTAC TTGCTGTTAGACTATGCCATCAATTGTAATTGTTGGTTCTGATGATC