Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os12t0133400-01
CDS Infomation

cds chromosome:IRGSP-1.0:12:1646425:1647986:1 gene:Os12g0133400 gene_biotype:protein_coding transcript_biotype:protein_coding description:4'-phosphopantetheinyl transferase domain containing protein. (Os12t0133400-01)
Sequence

ATGATGGAGGAAGGAGAGAAGCAGAGCAGCGGGGGGCGGTGGCGGTGTAGGTGGCTCGTC
GACGTCGGCCGGTGGCGCCCCTCCCCCGCCGAGTTCCAAGCCGCCGCCGCCGTCCTCCCG
CCGCACGACCGCCCCGCCATCCACAGGTTCGTCAGAGAAGAAGACAGGAAACGAGCGCTC
GTCAGCCGCCTGCTCAAGTACTCGCTCGTGCACCATGCCCTTGGAATGCCATTCCACCAA
ATTCGCATCAACCGCACGCTTGAAGGGAAGCCCTATCTGAATAAAAATGTCAACCTTCCT
GGCTTCAACTTCAACACGTCGCATCAGGGGGAGTACGTTGGCATAGCATCTGAGCCTCTC
TGCCTCGTTGGCCTGGACATTGTGTGCATCTCCAAGCCCCAACGAGAAACTGCCCTGGAG
TTCATCAACAATTTCACTTCCTATCTCACAGATCATGAGTGGAACTGCATTGTTACTGCA
GACAGTCATGATGGTATGCTAACTGAGTTCTACAGGTATTGGTGTCTTAAAGAAGCATTT
GTCAAAGCTACAGGTGCTGGCGTTGGATTCGGGCTGCAACGTTTGGAATTCCACCATATG
AATTGGACTAATATTTCTCTCTGTATTGATGGAGAAGAGGCTAGGAAATGGATGTTTTGG
CTTTTCAAGATTGATGAAATGCATTTGGCATCCATTGCGAAAGGGCATCCAGAGGATGCT
ATTGACAGCTTCAGGAGAACATTATCTGATGTGGTTATTCAGGAGGGAGAATTGCATACG
GCAATAGAAATTCCAGAAGAAGCTTTCACTCTATTGACAGTGGAACACCTTATACAGTTA
CATGATTAA

Peptide Sequence

PEP ID

Os12t0133400-01
PEP Infomation

pep chromosome:IRGSP-1.0:12:1646425:1647986:1 gene:Os12g0133400 transcript:Os12t0133400-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:4'-phosphopantetheinyl transferase domain containing protein. (Os12t0133400-01)
Sequence

MMEEGEKQSSGGRWRCRWLVDVGRWRPSPAEFQAAAAVLPPHDRPAIHRFVREEDRKRAL
VSRLLKYSLVHHALGMPFHQIRINRTLEGKPYLNKNVNLPGFNFNTSHQGEYVGIASEPL
CLVGLDIVCISKPQRETALEFINNFTSYLTDHEWNCIVTADSHDGMLTEFYRYWCLKEAF
VKATGAGVGFGLQRLEFHHMNWTNISLCIDGEEARKWMFWLFKIDEMHLASIAKGHPEDA
IDSFRRTLSDVVIQEGELHTAIEIPEEAFTLLTVEHLIQLHD

Transcript Sequence

Transcript ID

Os12t0133400-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:12:1646425:1647986:1 gene:Os12g0133400 gene_biotype:protein_coding transcript_biotype:protein_coding description:4'-phosphopantetheinyl transferase domain containing protein. (Os12t0133400-01)
Sequence

TTGTTGATGATGGAGGAAGGAGAGAAGCAGAGCAGCGGGGGGCGGTGGCGGTGTAGGTGG
CTCGTCGACGTCGGCCGGTGGCGCCCCTCCCCCGCCGAGTTCCAAGCCGCCGCCGCCGTC
CTCCCGCCGCACGACCGCCCCGCCATCCACAGGTTCGTCAGAGAAGAAGACAGGAAACGA
GCGCTCGTCAGCCGCCTGCTCAAGTACTCGCTCGTGCACCATGCCCTTGGAATGCCATTC
CACCAAATTCGCATCAACCGCACGCTTGAAGGGAAGCCCTATCTGAATAAAAATGTCAAC
CTTCCTGGCTTCAACTTCAACACGTCGCATCAGGGGGAGTACGTTGGCATAGCATCTGAG
CCTCTCTGCCTCGTTGGCCTGGACATTGTGTGCATCTCCAAGCCCCAACGAGAAACTGCC
CTGGAGTTCATCAACAATTTCACTTCCTATCTCACAGATCATGAGTGGAACTGCATTGTT
ACTGCAGACAGTCATGATGGTATGCTAACTGAGTTCTACAGGTATTGGTGTCTTAAAGAA
GCATTTGTCAAAGCTACAGGTGCTGGCGTTGGATTCGGGCTGCAACGTTTGGAATTCCAC
CATATGAATTGGACTAATATTTCTCTCTGTATTGATGGAGAAGAGGCTAGGAAATGGATG
TTTTGGCTTTTCAAGATTGATGAAATGCATTTGGCATCCATTGCGAAAGGGCATCCAGAG
GATGCTATTGACAGCTTCAGGAGAACATTATCTGATGTGGTTATTCAGGAGGGAGAATTG
CATACGGCAATAGAAATTCCAGAAGAAGCTTTCACTCTATTGACAGTGGAACACCTTATA
CAGTTACATGATTAAATGGTCTTCTTGAATTTTGCGGTGACATACTAATGCAGGACTAAA
ATCAACAAATTGTGAGTGTATCCTGAAAGTTAAAATACATACATAGCACACCAAAATTAG
GAAAAGTATCCTTGTATTTGCTCTCGGTGCTTCTGCAGAAATGAGAGCTTAAGATGTTAG
GGCCTGTTTTTTCTTTCATAACAGAGGAGACGCTTGATATTGTAAGCTTTGACTAGTTTG
GTAGTGTTTGCAAAGGCGCATTTTTTT