Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os12t0133100-02
CDS Infomation

cds chromosome:IRGSP-1.0:12:1606119:1616744:-1 gene:Os12g0133100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ZINC-INDUCED FACILITATOR-LIKE 12 description:Major facilitator superfamily protein. (Os12t0133100-01);Similar to cDNA clone:J023128K07, full insert sequence. (Os12t0133100-02)
Sequence

ATGGGTGATCATGGACGCCGGCGGCAGGCGGCGGCGCCGCTGCTGGAGAAGAAGGGCAGC
ACCGGCACCGGCGTGGACGATGGGTACTGCATTGAGGGGTGCCCCGGGTGCGTCGTCGAC
CGGCGGAAGGCCGCGAGCTACGGCATCCCCTACGGGAGCTTCCTCTTTGTCTGGATTGTC
ACGCTCTGCACAGCTTTACCAATATCATCATTGTTCCCCTTCTTGTACTTCATGATAAGA
GACTTGCATGTTGCAAAAAGGACAGAAGATATTGGGTTCTATGCCGGCTTTGTGGGTGCT
TCGTTTATGTTCGGTCGATGTTTGACTTCAACTGTTTGGGGAATAGCAGCAGATCGTATT
GGGAGGAAACCAGTTGTTGTGTTTGGCATTTTTGCGGTGGTCATATTTAATACGCTATTT
GGGCTTAGTTTCACCTATTGGATGGCAATAGCTACAAGATTCCTTCTTGGTGCTTTAAAT
GGTTTACTTGGGCCAATAAAGGCCTATGCAATTGAAGTTTGCCGACCTGAACATGAAGCT
CTTGCATTGTCACTTGTTAGCACAGCATGGGGAATAGGTCTTATCATTGGTCCAGCTATT
GGAGGCTACCTTTCACAGCCTGCAGAGAAATTTCCCAATGTCTTTTCCCCTGACTCACTG
TTTGCAAGGTTCCCATATTTCTTACCCTGCTTGTGCATATCAGTCTTTGCTGCTGTTGTT
CTCATAGGCTGCATATGGATGCCAGAGACATTACACAAGCATAAAGCTGATGCAAGTAGA
TCCCAAACTGTTGAAGCTTTGGAGAGCCATTTGATTGATCCAAAAGAAAAGGCTGACCAA
AATGGTAGTTTGGACTGCAAGAAGAGCTTATTGAGAAATTGGCCCTTGATGTCCTCCATA
ATTCTCTATTGTGTCTTCTCCTTTCATGATATGGCTTATACAGAGATATTCTCTCTATGG
GCAGAAAGTGACAGGAAGTACGGTGGGCTGAGTTTGTCATCTGAAGATGTGGGTCAAGTG
CTTGCAATCACAGGTGTCAGTCTTCTTGTGTATCAACTCTTCATTTATCCTCGTATCAAT
AAGGTTATAGGGCATATTAAGGCTTCTCGAATTGCAGCTATTCTGTGCATACCTATTCTC
TTTGCATATCCTTATATGACATACCTATCGGGACCTGGATTAACGATCATACTGAACATT
GCGTCAGTTATAAAAAATAATCTTGGTGTTACCATCATTACAGGCTGTTTCATCCTACAA
AATAATGCTGTGCCTCAAGACCAACGAGGGGCTGCTAATGGCTTGGCAATGACAGGAATG
TCCTTTTTTAAGGCAGTGGCTCCAGCAGGGGCGGGCATTGTGTTCTCGTGGGCACAAAAA
CGCCAGCATGCTTCCTTCCTTCCAGGTGATCAGATGGTGTTCTTTCTTTTGAATCTCTTC
GAGTTGCTTGGACTTATCCTCACTTTCAAACCCTTTCTGGCCGTACCAGAGCAGCACGAT
ACAAATTAG

Peptide Sequence

PEP ID

Os12t0133100-02
PEP Infomation

pep chromosome:IRGSP-1.0:12:1606119:1616744:-1 gene:Os12g0133100 transcript:Os12t0133100-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ZINC-INDUCED FACILITATOR-LIKE 12 description:Major facilitator superfamily protein. (Os12t0133100-01);Similar to cDNA clone:J023128K07, full insert sequence. (Os12t0133100-02)
Sequence

MGDHGRRRQAAAPLLEKKGSTGTGVDDGYCIEGCPGCVVDRRKAASYGIPYGSFLFVWIV
TLCTALPISSLFPFLYFMIRDLHVAKRTEDIGFYAGFVGASFMFGRCLTSTVWGIAADRI
GRKPVVVFGIFAVVIFNTLFGLSFTYWMAIATRFLLGALNGLLGPIKAYAIEVCRPEHEA
LALSLVSTAWGIGLIIGPAIGGYLSQPAEKFPNVFSPDSLFARFPYFLPCLCISVFAAVV
LIGCIWMPETLHKHKADASRSQTVEALESHLIDPKEKADQNGSLDCKKSLLRNWPLMSSI
ILYCVFSFHDMAYTEIFSLWAESDRKYGGLSLSSEDVGQVLAITGVSLLVYQLFIYPRIN
KVIGHIKASRIAAILCIPILFAYPYMTYLSGPGLTIILNIASVIKNNLGVTIITGCFILQ
NNAVPQDQRGAANGLAMTGMSFFKAVAPAGAGIVFSWAQKRQHASFLPGDQMVFFLLNLF
ELLGLILTFKPFLAVPEQHDTN

Transcript Sequence

Transcript ID

Os12t0133100-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:12:1606119:1616744:-1 gene:Os12g0133100 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ZINC-INDUCED FACILITATOR-LIKE 12 description:Major facilitator superfamily protein. (Os12t0133100-01);Similar to cDNA clone:J023128K07, full insert sequence. (Os12t0133100-02)
Sequence

GCAAGCAAGTCCCTCTGCTAGCTGCGAGCCTCACGTGCCCATTCACTCTCTTTATTTATT
GCTGATTCCCGATCGATCGATCGATCGATCGATCAGCAGGCAATAGTTAATCGATCTCAA
CAACTACCCATCAGTTATTCAATACAATACAGCCATTCAGACAGAAGCAAGGTCTATCGA
GTCAGAGAGATCGACATCTCGGCGAGCGAGATCGGTGAATTGATGGGTGATCATGGACGC
CGGCGGCAGGCGGCGGCGCCGCTGCTGGAGAAGAAGGGCAGCACCGGCACCGGCGTGGAC
GATGGGTACTGCATTGAGGGGTGCCCCGGGTGCGTCGTCGACCGGCGGAAGGCCGCGAGC
TACGGCATCCCCTACGGGAGCTTCCTCTTTGTCTGGATTGTCACGCTCTGCACAGCTTTA
CCAATATCATCATTGTTCCCCTTCTTGTACTTCATGATAAGAGACTTGCATGTTGCAAAA
AGGACAGAAGATATTGGGTTCTATGCCGGCTTTGTGGGTGCTTCGTTTATGTTCGGTCGA
TGTTTGACTTCAACTGTTTGGGGAATAGCAGCAGATCGTATTGGGAGGAAACCAGTTGTT
GTGTTTGGCATTTTTGCGGTGGTCATATTTAATACGCTATTTGGGCTTAGTTTCACCTAT
TGGATGGCAATAGCTACAAGATTCCTTCTTGGTGCTTTAAATGGTTTACTTGGGCCAATA
AAGGCCTATGCAATTGAAGTTTGCCGACCTGAACATGAAGCTCTTGCATTGTCACTTGTT
AGCACAGCATGGGGAATAGGTCTTATCATTGGTCCAGCTATTGGAGGCTACCTTTCACAG
CCTGCAGAGAAATTTCCCAATGTCTTTTCCCCTGACTCACTGTTTGCAAGGTTCCCATAT
TTCTTACCCTGCTTGTGCATATCAGTCTTTGCTGCTGTTGTTCTCATAGGCTGCATATGG
ATGCCAGAGACATTACACAAGCATAAAGCTGATGCAAGTAGATCCCAAACTGTTGAAGCT
TTGGAGAGCCATTTGATTGATCCAAAAGAAAAGGCTGACCAAAATGGTAGTTTGGACTGC
AAGAAGAGCTTATTGAGAAATTGGCCCTTGATGTCCTCCATAATTCTCTATTGTGTCTTC
TCCTTTCATGATATGGCTTATACAGAGATATTCTCTCTATGGGCAGAAAGTGACAGGAAG
TACGGTGGGCTGAGTTTGTCATCTGAAGATGTGGGTCAAGTGCTTGCAATCACAGGTGTC
AGTCTTCTTGTGTATCAACTCTTCATTTATCCTCGTATCAATAAGGTTATAGGGCATATT
AAGGCTTCTCGAATTGCAGCTATTCTGTGCATACCTATTCTCTTTGCATATCCTTATATG
ACATACCTATCGGGACCTGGATTAACGATCATACTGAACATTGCGTCAGTTATAAAAAAT
AATCTTGGTGTTACCATCATTACAGGCTGTTTCATCCTACAAAATAATGCTGTGCCTCAA
GACCAACGAGGGGCTGCTAATGGCTTGGCAATGACAGGAATGTCCTTTTTTAAGGCAGTG
GCTCCAGCAGGGGCGGGCATTGTGTTCTCGTGGGCACAAAAACGCCAGCATGCTTCCTTC
CTTCCAGGTGATCAGATGGTGTTCTTTCTTTTGAATCTCTTCGAGTTGCTTGGACTTATC
CTCACTTTCAAACCCTTTCTGGCCGTACCAGAGCAGCACGATACAAATTAGACTGTTCAG
GTATACTACAGATCTAGATTCTTCAGAACTTCAGATGTTGGCAATTTCATGAGCCCTGCA
GCCCGCTGTGTGAAGCAAAGGTATAACATATGCTCATCTGGATCCCCCAGGAGCAATAGA
TAGAAGCGAGAGTACTACTCTGTCCCAAAGAATCAAAGCTAGGGTTTGATTATTTTTGGG
ACGGAGGGGTAGGTGCCAGATATGCAATTGCAGCATTTCAGCGAAAGGAATATATATAGT
TGGGGTAAATGGTGGCCACTGATGGCTAGGTTTTTCATGGCCAGCCAGCATGTATACCGA
GTAGCATTCTACCAGTATAATGAATATAGTACTATGTACATTGTAACTAGTAAAACTCTG
TAAGTGACATCAGCTTGAGAATGAAATTATTGCTGGAATCGAGATCAGTACATTGCT