Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os12t0133000-00
CDS Infomation

cds chromosome:IRGSP-1.0:12:1595326:1600969:-1 gene:Os12g0133000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ZINC-INDUCED FACILITATOR-LIKE 11 description:Similar to Major facilitator superfamily antiporter. (Os12t0133000-00)
Sequence

ATGGGCAGCGGCAGCGAGGAGGCGGCGCCGCTGCTGCTGCCGGTGGCGGCGGCGACGGCG
ACGGCGGAGGAGAGGTGCCCGGGGTGCGTGCAGGAGCGGAGGAAGGCGAGCCGCGGAGGG
CGGATCCCCTACACGGAGCTCTTCTTCGTCGCCGTTACCACTCTTGCCTCATCTTTACCA
ATCACGTGCCTCTTCCCCTTCCTCTACTTCATGGTAAGGGACCTGCAAGTAGCACAAACA
GAGGAGGACATTGGGTATTATGCTGGATTTCTTGGTGCTTCGTACATGGTTGGTAGATCC
TTTGCCGCGATATTTTGGGGAGTTGTGGCAGATCGTATAGGAAGGAAACCTGTCATTGTG
TTTTCAATATTGTCTGTGGTCATATTTAACACATTATTTGGGCTAAGTACAAAGTATTGG
ATGGCACTTACTACAAGGTTTGTTCTAGGTGCTCTAAATGGTTTACTTGCGCCAATAAAG
GCTTATTCTATTGAAGTTTGCCAAACTGAACATCAAGCTCTTGGACTCTCCATTGTTAAC
ACAGCATGGGGTTTGGGTCTCGTTGTTGGTCCAGCTCTTGGAGGCTACCTTGCACAGCCT
GTTGAAAAATATCCACATGTATTTTCTAAGGAGTCAGTTTTTGGGAGATTCCCGTATCTC
TTACCTTGCCTTGGTGTATCATTGTTTGCTGCTATTGTTCTGATAAGTTGTATTTGGCTT
CCGGAGACTATACATAAACATAAATCTCCTGATAAGGACATCAAAAGAATCAAAGAATTG
CCATTACAGCAGGCTTATTGGGATTCACCTCGTAAGAAGAGCTTGTTCCAGAATCGGCCA
TGGATGTCTACTATGATTTCATATTGTTTTTTTGGTCTTCATGACACAGCATACAGTGAG
ATATTATCCTTGTGGGCTGTGAGTGATAGAAAATATGGTGGCCTTAGCTTTTCATCTGAG
GATATTGGTCAGGTTCTTGCTGTTGCAGGTGCTAGTCTTCTAGCATATCAGCTTATTATT
TACCACTGGGTTCATAAGTTTCTTGGACCAATCATTTCATTACGAATTGCTTCTGCTCTA
TCTATACTTATTCTTTCTACTTATCCTTTTATGACATACCTATCTGGCGCGGAACTTTCC
TTAGCTTTTTATTCAGCGGCAATGATGAAAAGTGCTCTTGCAATTACTATAAGCACAGGA
ATTTGCCTTTTACAGAACAATGCTGTGCTTCAAGAACATAGAGGCACTGCAAATGGTGTA
TCAACAACAGCTATGTCATTTTTCAAGGCGATTGCTCCAGTAGGGGCAGGTGTTCTATTC
TCGTGGGCGCAAAAACGTCAGGATGCCCTCTTCTTTCCAGGTGATCAAGTGGTGTTCTTG
ATGCTGAACTTTGTGGAGCTCATTGGACTCATATTTACTTTTGAGCCTTTTATGGTGTTA
CCTGAGGCATCAGATGAGTGTAGTTAG

Peptide Sequence

PEP ID

Os12t0133000-00
PEP Infomation

pep chromosome:IRGSP-1.0:12:1595326:1600969:-1 gene:Os12g0133000 transcript:Os12t0133000-00 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ZINC-INDUCED FACILITATOR-LIKE 11 description:Similar to Major facilitator superfamily antiporter. (Os12t0133000-00)
Sequence

MGSGSEEAAPLLLPVAAATATAEERCPGCVQERRKASRGGRIPYTELFFVAVTTLASSLP
ITCLFPFLYFMVRDLQVAQTEEDIGYYAGFLGASYMVGRSFAAIFWGVVADRIGRKPVIV
FSILSVVIFNTLFGLSTKYWMALTTRFVLGALNGLLAPIKAYSIEVCQTEHQALGLSIVN
TAWGLGLVVGPALGGYLAQPVEKYPHVFSKESVFGRFPYLLPCLGVSLFAAIVLISCIWL
PETIHKHKSPDKDIKRIKELPLQQAYWDSPRKKSLFQNRPWMSTMISYCFFGLHDTAYSE
ILSLWAVSDRKYGGLSFSSEDIGQVLAVAGASLLAYQLIIYHWVHKFLGPIISLRIASAL
SILILSTYPFMTYLSGAELSLAFYSAAMMKSALAITISTGICLLQNNAVLQEHRGTANGV
STTAMSFFKAIAPVGAGVLFSWAQKRQDALFFPGDQVVFLMLNFVELIGLIFTFEPFMVL
PEASDECS

Transcript Sequence

Transcript ID

Os12t0133000-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:12:1595326:1600969:-1 gene:Os12g0133000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:ZINC-INDUCED FACILITATOR-LIKE 11 description:Similar to Major facilitator superfamily antiporter. (Os12t0133000-00)
Sequence

GAGATCGATGGGCAGCGGCAGCGAGGAGGCGGCGCCGCTGCTGCTGCCGGTGGCGGCGGC
GACGGCGACGGCGGAGGAGAGGTGCCCGGGGTGCGTGCAGGAGCGGAGGAAGGCGAGCCG
CGGAGGGCGGATCCCCTACACGGAGCTCTTCTTCGTCGCCGTTACCACTCTTGCCTCATC
TTTACCAATCACGTGCCTCTTCCCCTTCCTCTACTTCATGGTAAGGGACCTGCAAGTAGC
ACAAACAGAGGAGGACATTGGGTATTATGCTGGATTTCTTGGTGCTTCGTACATGGTTGG
TAGATCCTTTGCCGCGATATTTTGGGGAGTTGTGGCAGATCGTATAGGAAGGAAACCTGT
CATTGTGTTTTCAATATTGTCTGTGGTCATATTTAACACATTATTTGGGCTAAGTACAAA
GTATTGGATGGCACTTACTACAAGGTTTGTTCTAGGTGCTCTAAATGGTTTACTTGCGCC
AATAAAGGCTTATTCTATTGAAGTTTGCCAAACTGAACATCAAGCTCTTGGACTCTCCAT
TGTTAACACAGCATGGGGTTTGGGTCTCGTTGTTGGTCCAGCTCTTGGAGGCTACCTTGC
ACAGCCTGTTGAAAAATATCCACATGTATTTTCTAAGGAGTCAGTTTTTGGGAGATTCCC
GTATCTCTTACCTTGCCTTGGTGTATCATTGTTTGCTGCTATTGTTCTGATAAGTTGTAT
TTGGCTTCCGGAGACTATACATAAACATAAATCTCCTGATAAGGACATCAAAAGAATCAA
AGAATTGCCATTACAGCAGGCTTATTGGGATTCACCTCGTAAGAAGAGCTTGTTCCAGAA
TCGGCCATGGATGTCTACTATGATTTCATATTGTTTTTTTGGTCTTCATGACACAGCATA
CAGTGAGATATTATCCTTGTGGGCTGTGAGTGATAGAAAATATGGTGGCCTTAGCTTTTC
ATCTGAGGATATTGGTCAGGTTCTTGCTGTTGCAGGTGCTAGTCTTCTAGCATATCAGCT
TATTATTTACCACTGGGTTCATAAGTTTCTTGGACCAATCATTTCATTACGAATTGCTTC
TGCTCTATCTATACTTATTCTTTCTACTTATCCTTTTATGACATACCTATCTGGCGCGGA
ACTTTCCTTAGCTTTTTATTCAGCGGCAATGATGAAAAGTGCTCTTGCAATTACTATAAG
CACAGGAATTTGCCTTTTACAGAACAATGCTGTGCTTCAAGAACATAGAGGCACTGCAAA
TGGTGTATCAACAACAGCTATGTCATTTTTCAAGGCGATTGCTCCAGTAGGGGCAGGTGT
TCTATTCTCGTGGGCGCAAAAACGTCAGGATGCCCTCTTCTTTCCAGGTGATCAAGTGGT
GTTCTTGATGCTGAACTTTGTGGAGCTCATTGGACTCATATTTACTTTTGAGCCTTTTAT
GGTGTTACCTGAGGCATCAGATGAGTGTAGTTAGCCAAGTGCAGAGGAATT