Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os12t0131400-01
CDS Infomation

cds chromosome:IRGSP-1.0:12:1514456:1519357:-1 gene:Os12g0131400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:F-box protein 640 description:Hypothetical conserved gene. (Os12t0131400-01)
Sequence

ATGAAGCAATCACGAAGGGAGGAAGTGGACGACGATGTGAGCGTTGGTAAGAAGGAGGAA
GAAGCAGGATACTGCAGCAGCAGCAGCATCTCACGCCTCCCAGAGGCATGCCTGGCTCAT
GCAATCTCCTTCACCACTCCCACGGACGCCTGCCGCTGCTCCGCCGTCTCCGCCGACTTC
CAAGCAGCGGCGAGCTCCAACGCCGTGTGGGAGCGCTTCCTGCCGCCGGACTACCACTCC
ATCCTCGCTCGAGCCGACGATCCTGTGGATTTCACCACTTCCAACAAGGAGCTCTTCCTC
AGCCTCGCCCAGGACCACGTCCTTCTCGACCAACGCAGCAAGAGTTTTTGGTTGGAAAGA
ACAAGCGGAGCTAAATGCTACTTGCTATCATCCAGATCATTAGAGATAGCATGGGGGGAT
GATGCCCGGTACTGGAGATGGATCTACTTACCCGATTCCAGGTTTGAAAGAGTAGCTGCG
CTTGTATTTGTCTGCTGGTTCCATTTGCGTGGCCGCATCAACTGCAGAGAGCTCTCACCC
AACACACGATACATAGTCTATCTCATCTTCAAATTGGCAGATAAATCATACGGGCTTGAC
TGCCGGACACAAGAGGCATATATCACCATGGACGATCAAGTAGTGTCTGCCAAGCGCACC
GTCTCTCTGCACCCACGCACGCAAGAGACACCTCTTGACATGGGTAGAAGCGAAGTAGGA
CGAGCAGAGGAGACAGTGAGCTATCCGAGAGAACGGGGTGACGGCTGGATGGAGGTACAA
CTGGGGCACTTCTACAACCACCAAGGAGATGGAATGGTTGTTATCAACCTGCAAGAGATC
GTCCAGCTCAACTCGAAGAAAGGACTTATCCTCGAGGGTATGGAAATTAGACACAGCATT
GGTCCTTAA

Peptide Sequence

PEP ID

Os12t0131400-01
PEP Infomation

pep chromosome:IRGSP-1.0:12:1514456:1519357:-1 gene:Os12g0131400 transcript:Os12t0131400-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:F-box protein 640 description:Hypothetical conserved gene. (Os12t0131400-01)
Sequence

MKQSRREEVDDDVSVGKKEEEAGYCSSSSISRLPEACLAHAISFTTPTDACRCSAVSADF
QAAASSNAVWERFLPPDYHSILARADDPVDFTTSNKELFLSLAQDHVLLDQRSKSFWLER
TSGAKCYLLSSRSLEIAWGDDARYWRWIYLPDSRFERVAALVFVCWFHLRGRINCRELSP
NTRYIVYLIFKLADKSYGLDCRTQEAYITMDDQVVSAKRTVSLHPRTQETPLDMGRSEVG
RAEETVSYPRERGDGWMEVQLGHFYNHQGDGMVVINLQEIVQLNSKKGLILEGMEIRHSI
GP

Transcript Sequence

Transcript ID

Os12t0131400-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:12:1514456:1519357:-1 gene:Os12g0131400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:F-box protein 640 description:Hypothetical conserved gene. (Os12t0131400-01)
Sequence

GGCCATGAAGCAATCACGAAGGGAGGAAGTGGACGACGATGTGAGCGTTGGTAAGAAGGA
GGAAGAAGCAGGATACTGCAGCAGCAGCAGCATCTCACGCCTCCCAGAGGCATGCCTGGC
TCATGCAATCTCCTTCACCACTCCCACGGACGCCTGCCGCTGCTCCGCCGTCTCCGCCGA
CTTCCAAGCAGCGGCGAGCTCCAACGCCGTGTGGGAGCGCTTCCTGCCGCCGGACTACCA
CTCCATCCTCGCTCGAGCCGACGATCCTGTGGATTTCACCACTTCCAACAAGGAGCTCTT
CCTCAGCCTCGCCCAGGACCACGTCCTTCTCGACCAACGCAGCAAGAGTTTTTGGTTGGA
AAGAACAAGCGGAGCTAAATGCTACTTGCTATCATCCAGATCATTAGAGATAGCATGGGG
GGATGATGCCCGGTACTGGAGATGGATCTACTTACCCGATTCCAGGTTTGAAAGAGTAGC
TGCGCTTGTATTTGTCTGCTGGTTCCATTTGCGTGGCCGCATCAACTGCAGAGAGCTCTC
ACCCAACACACGATACATAGTCTATCTCATCTTCAAATTGGCAGATAAATCATACGGGCT
TGACTGCCGGACACAAGAGGCATATATCACCATGGACGATCAAGTAGTGTCTGCCAAGCG
CACCGTCTCTCTGCACCCACGCACGCAAGAGACACCTCTTGACATGGGTAGAAGCGAAGT
AGGACGAGCAGAGGAGACAGTGAGCTATCCGAGAGAACGGGGTGACGGCTGGATGGAGGT
ACAACTGGGGCACTTCTACAACCACCAAGGAGATGGAATGGTTGTTATCAACCTGCAAGA
GATCGTCCAGCTCAACTCGAAGAAAGGACTTATCCTCGAGGGTATGGAAATTAGACACAG
CATTGGTCCTTAAGGAAGAACTGAAAAATGGAGCAAGTATGTTAATTAGAAGACAAAATT
AAATAATGCAGTGTTGAATATGCACAAAGAGGAGTCATGATACAGCCAGCGGTAAGTGAT
CAGTTGCCGCTCCTAAGCCAATGAACCAGTACCAATAAATTGATTGGAACAATTTAAATT
CAACTTTGGAAGTATGCCAACTTCATCTTCTCTTTCAAGTTTATTTGTTGTTACATTTCT
GAAGGAAAAAGAAATACTCACATCCAGTTCTAGAATTAAATCAATTGCCACATTTGTGGT
GGAACTATTGTATGTTATATACTTTTTTTGTGAAGCATGTCCCTATGGATTATATCCCTA
CAATCATTATGATCTATTTGTGATGTATTAATG