Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os12t0130500-00
CDS Infomation	cds chromosome:IRGSP-1.0:12:1473487:1476097:-1 gene:Os12g0130500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to D-mannose binding lectin family protein. (Os12t0130500-00)
Sequence	GCGCGCGACAGTCTCCTCCGGGGCGCCTCCATCGCCGTCGAGGACCACGCCACCGACGTC CTGCTCTCCCCGGACGGCACCTTCGCCTGCGGCTTCTACGGCGTCTCGCCCACCGTCTTC ACCTTCTCCGTCTGGTTCGCGCGCGCCGCCGACCGCGCCGTCGTCTGGTCCGCCAACCGC GCCCGCCCCGTCCACAGCAAGCGCTCCCGTCTCAAACTCAGCGGCCGCCGCGGCGCGCTC GTCCTCACCGACTACGACGGCGAGGTGGTCTGGAACTCCACCGTCAGCGCCAGCGCCACC GCTGCGCGCGCGCGGCTGCACGATTCCGGCAACCTCGCCATCGAGGACGGGAGCGGGAAC GTCCTATGGCAGAGCTTCGACCACCCCACCGACACACTACTGCCCACGCAGCGCATCGCC GCCGGCGAGGCGATGGTCTCGGCAGACAAGATCCTCGCCGCCGGCTTCTACAGCTTCCGC TTCAGCGACTACGCCATGCTGTCGCTGGTGTACGACAACCATGAGATGTCCAGCATCTAC TGGCCCAACCCCTACTACAGCTACTGGCAGAACAGTCGCAAGATCTACAACTTCACCCGG GAAGCTTTCTTCGACGCCTCCGGCCATTTCTCGTCCAGCGACAACGCCACCTTCGGCGCC GCCGATCTGGGCAAGAATGTCGCCGTTAGGAGGAGGCTGACGCTGGACACGGACGGCAAC CTCAGGCTGTACAGCCTTGACGAGGTCGCCGGGACATGGTTGGTGTCGTGGATGGCGTTC AGCAACCCGTGCATCATCCACGGCGTGTGCGGCGCCAACGCCGTCTGCCTCTACTCGCCG GCGCCGGTGTGCGTCTGCGCGCCGGGGTACGCGCGCGCCGACCCGAGCGACTGGAGCAGA GGCTGCCGGCCAACGTTCAACTCCGGTGACGGCGGCGGCCGGCCGCGGGCGATGAAGCTG GTGGCGCTGCCGCACACCGACTTCTGGGGCTTCGACATCAACAGCAGCGAGAACCTGTCG CTGGACGAGTGCTCGACACGGTGCATGAGCGAGCCGTCGTGCGTGGTTTTCCAGTACAAG CAGGGCAAAGGTGAGTGCTACCCAAAAAGCCTCATGTTCAATGGCAGAACGTTCCCCGGC CTGCCTGGGACGGCCTATCTCAAGGTCCCGGCTGATCTCGACATGCCAGAAATTCACATC CACCAATGGCAAAAGGACGGCGATCGCCACGCCATTGCCATTCAGGAAGACATTGTCGGA TGCGGTGGCATGAGCTCACCGGAGTTCTTGCTCAATGTCTCGAATGCGTCATCGAGCAAA AGTAATCAGGGCAAGTCGATATGGTTCTACTTCTACGGATTTCTGACTGCATTTTTTGTC ATTGAGGTGTTTGTGATAGCATTCGGTTGCTGGCTCTTTTCCAACAAGGGAGTTTTTAGG CGATGTCAGGTTTCAGCACTAGATGAAGGGTACAGGATGGTTACCAACCATTTTCGCGCA TATAGTTACGTAGAGCTACGGAATGGAACTAGAAATTTTCAGAGTGAGATCGGCCGTGGT GGGTCAGGTGCTACAAGATGTGAAGCAGGGTGA

Peptide Sequence

PEP ID	Os12t0130500-00
PEP Infomation	pep chromosome:IRGSP-1.0:12:1473487:1476097:-1 gene:Os12g0130500 transcript:Os12t0130500-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to D-mannose binding lectin family protein. (Os12t0130500-00)
Sequence	ARDSLLRGASIAVEDHATDVLLSPDGTFACGFYGVSPTVFTFSVWFARAADRAVVWSANR ARPVHSKRSRLKLSGRRGALVLTDYDGEVVWNSTVSASATAARARLHDSGNLAIEDGSGN VLWQSFDHPTDTLLPTQRIAAGEAMVSADKILAAGFYSFRFSDYAMLSLVYDNHEMSSIY WPNPYYSYWQNSRKIYNFTREAFFDASGHFSSSDNATFGAADLGKNVAVRRRLTLDTDGN LRLYSLDEVAGTWLVSWMAFSNPCIIHGVCGANAVCLYSPAPVCVCAPGYARADPSDWSR GCRPTFNSGDGGGRPRAMKLVALPHTDFWGFDINSSENLSLDECSTRCMSEPSCVVFQYK QGKGECYPKSLMFNGRTFPGLPGTAYLKVPADLDMPEIHIHQWQKDGDRHAIAIQEDIVG CGGMSSPEFLLNVSNASSSKSNQGKSIWFYFYGFLTAFFVIEVFVIAFGCWLFSNKGVFR RCQVSALDEGYRMVTNHFRAYSYVELRNGTRNFQSEIGRGGSGATRCEAG

Transcript Sequence

Transcript ID	Os12t0130500-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:12:1473487:1476097:-1 gene:Os12g0130500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to D-mannose binding lectin family protein. (Os12t0130500-00)
Sequence	CGGCGCGCGACAGTCTCCTCCGGGGCGCCTCCATCGCCGTCGAGGACCACGCCACCGACG TCCTGCTCTCCCCGGACGGCACCTTCGCCTGCGGCTTCTACGGCGTCTCGCCCACCGTCT TCACCTTCTCCGTCTGGTTCGCGCGCGCCGCCGACCGCGCCGTCGTCTGGTCCGCCAACC GCGCCCGCCCCGTCCACAGCAAGCGCTCCCGTCTCAAACTCAGCGGCCGCCGCGGCGCGC TCGTCCTCACCGACTACGACGGCGAGGTGGTCTGGAACTCCACCGTCAGCGCCAGCGCCA CCGCTGCGCGCGCGCGGCTGCACGATTCCGGCAACCTCGCCATCGAGGACGGGAGCGGGA ACGTCCTATGGCAGAGCTTCGACCACCCCACCGACACACTACTGCCCACGCAGCGCATCG CCGCCGGCGAGGCGATGGTCTCGGCAGACAAGATCCTCGCCGCCGGCTTCTACAGCTTCC GCTTCAGCGACTACGCCATGCTGTCGCTGGTGTACGACAACCATGAGATGTCCAGCATCT ACTGGCCCAACCCCTACTACAGCTACTGGCAGAACAGTCGCAAGATCTACAACTTCACCC GGGAAGCTTTCTTCGACGCCTCCGGCCATTTCTCGTCCAGCGACAACGCCACCTTCGGCG CCGCCGATCTGGGCAAGAATGTCGCCGTTAGGAGGAGGCTGACGCTGGACACGGACGGCA ACCTCAGGCTGTACAGCCTTGACGAGGTCGCCGGGACATGGTTGGTGTCGTGGATGGCGT TCAGCAACCCGTGCATCATCCACGGCGTGTGCGGCGCCAACGCCGTCTGCCTCTACTCGC CGGCGCCGGTGTGCGTCTGCGCGCCGGGGTACGCGCGCGCCGACCCGAGCGACTGGAGCA GAGGCTGCCGGCCAACGTTCAACTCCGGTGACGGCGGCGGCCGGCCGCGGGCGATGAAGC TGGTGGCGCTGCCGCACACCGACTTCTGGGGCTTCGACATCAACAGCAGCGAGAACCTGT CGCTGGACGAGTGCTCGACACGGTGCATGAGCGAGCCGTCGTGCGTGGTTTTCCAGTACA AGCAGGGCAAAGGTGAGTGCTACCCAAAAAGCCTCATGTTCAATGGCAGAACGTTCCCCG GCCTGCCTGGGACGGCCTATCTCAAGGTCCCGGCTGATCTCGACATGCCAGAAATTCACA TCCACCAATGGCAAAAGGACGGCGATCGCCACGCCATTGCCATTCAGGAAGACATTGTCG GATGCGGTGGCATGAGCTCACCGGAGTTCTTGCTCAATGTCTCGAATGCGTCATCGAGCA AAAGTAATCAGGGCAAGTCGATATGGTTCTACTTCTACGGATTTCTGACTGCATTTTTTG TCATTGAGGTGTTTGTGATAGCATTCGGTTGCTGGCTCTTTTCCAACAAGGGAGTTTTTA GGCGATGTCAGGTTTCAGCACTAGATGAAGGGTACAGGATGGTTACCAACCATTTTCGCG CATATAGTTACGTAGAGCTACGGAATGGAACTAGAAATTTTCAGAGTGAGATCGGCCGTG GTGGGTCAGGTGCTACAAGATGTGAAGCAGGGTGAGGATGTGTTCCAGGCTGAGTTGAGT GTTATTGGTAGAATTTATCATATGAATCTTGTTAGAATGTGGGGTTTTTGCTCAGAAGGA ATACATAGGATTTTAGTCTATGAGTACATTGAGAATGGATCATTGGCCAAAGTACTATTT CAAGGGAGGGATTCTGGTATGTTTCTTGGATGGAAGCAAAGGTTCAACATTGCTCTAGGT GTTGCCAAGGGGCTGGCATATCTTCACAATGAGTGCCTTGAGTGGATCATCCATTGCGAC ATGAAGCCAGAGAACATACTATTGGATGAAGATATGGAGCCTAAGATCACTGACTTTGGC TTGTCCAAGTTGTTGAATAGAGACGGGTCTGGTTCTGACATGTCATGGATTCGGGGGACA AGAGGATATATGGCTCCTGAGTGGGTTTCTAGCCTTCCAATCACAGAGAAAGTTGATGTG TACAGTTATGGAGTGGTGCTTCTTGAACTGGTGAAAGGGGTGAGGATTTCAGATTGGGTG TTGGATGGGAAAGAGGAACTAGAAGCCGAATTGAGAAGTGTGGTTAAGATGGTTGTCAGC AAACTTGAGAGCAACATAGAATCCTTGGTTGCGGATTTGATGGATGATCGGTTGCATGGT GAATTTAATCATTTGCAGGCTAGGCTACTAATGCAATTGGCCGTTTCATGCTTGGAAGAA GATAAAAACAAAAGGCCAACCATGAAGTACATAGTACAAATGCTTATTTCTGCTGAAGAT GATGCTCATGCCTTCACCTAATTCCGATGGTTCTAACACAAGTATTTGAGATTTAATATG AAGTTCACTCTTTATCTATTTCACCCTTTCTGTAAAAACTATGCAAATTCAAGAGCACTG TACTTTGTTAGTTGGAAGATTGTAAGAGAGTGCAGGTTCTTAAGGACAACTTGATAAACA TCACTATAGTACTGAAATTATGCTAGCAAATGATTAAAACT