Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os12t0130200-00
CDS Infomation	cds chromosome:IRGSP-1.0:12:1457706:1459747:1 gene:Os12g0130200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to D-mannose binding lectin family protein, expressed. (Os12t0130200-00)
Sequence	ATATTGTCACTTATATATGATGACGCTAATGTTTCCGGTGTATACTGGCCAGATCCTGAT TACCTGTACTATGAGAATAATAGGAACCTTTATAACAGTACAAGGATAGGTAGTCTTGAT GATTATGGAGAATTTTTTTCGAGTGATCTTGCTAAGCATCAAGCCCGTGTTGCCTCTGAT AGAAGTTTGGGGATTAAAAGGAGGCTTACCTTGGATTATGATGGTAATCTTAGACTCTAT AGCTTGAATAACTCAGATGGAACATGGACAATTTCATGGATTGCTCAACCTCAAACATGC ATGACTCATGGTTTGTGTGGTCCATATGGAATCTGCCACTATTCACCTACACCAAGATGT TCATGCCCACCTGGTTATAAGATGAGGAATCCGGGTAACTGGACACAAGGTTGCAAGCCT ATTGTCGAAATTGCATGCGATGGTAAACAGAATGTAACATTTTTGCAACTTCGAAACACT GATTTTTGGGGTTCTGATCAACAACATATTGAAAAGGTACCCTGGGAGGTGTGTTGGAAC ACTTGCATAAGTGATTGCACATGTAAGGAATTTCAGTACCAAGAAGGAAATGGTACATGC TATCCAAAATCTTTTCTCTTTAATGGAAGGACTTTCCCGACACCTTTTGTGCGAACGATG TATATCAAACTTCCTTCAAGTTTGGATGTTTCTAAAAAACCCATTCCACAGTCTAGTATA CATGATTATACACCAAGTAGACTTGACTGTGATCGTGTAAACACAATAACCACAGAGGCA GTTCGTAACATGAATAAGATTGGTGGGGAGGAACCAAAATGGTTCTACTTCTATGGGTTT ATCGGTGTGTTTTTCATTGTTGAGGTTTTCTTCTTCGCATTTGCATGGTTCCTTGTCTTG AGGAAGGAGATGTGGTCATCTGAAGTATGGGCAGCTGAGGAAGGCTACAGGGTGATGACT AGTCATTTTCGAATGTATAGTTATAGAGAGCTGGTTAAGGCAACTGAAAGGTTTAAACAT GAGCTTGGATGGGGAGGTTCAGGAGTCGTCTATAAGGGAATATTGGATGACGATCGAGCA GTGGTCATAAAAAAGTTGGAAAATGTCACGCGAAATAGGGAGGAGTTTCAGGATGAGTTG CATGTTATTTCAAGAATCAACCATATGAACCTAGTAAGAATTTATTGTTTTTGCTCAGAA AGATTCCATAGGTTGCTGGTCTTAGAGTATGTTGAGAATGGATCATTGGCTAATGTACTG TTCAACAGTAAAATCTTGTTAGATTGGAAGCAAAGGTTTAATATTGCTTTAGGCGTTGCA AAGGGACTGGCTTATCTTCACCATGAGTGCCTAGAGTGGGTCATTCACTGCAACCTAAAG CCAGAGAACATTTTGCTGGATGAGAACTTAGAACCTAAGATCGCTGACTTTGGGTTGGCA AAGCTGCTTAGTAGATCTGGCTCTAAGCAGAATGTTTCACGAGCACGAGGGACCATAGGT TACATTGCTCCAGAATGGATATCTGGTTTACCAATAACAGCAAAGGTTGATGTATATAGT TATGGAGTCGTTCTTCTTGAGCTAGTGTCAGGAAAACGAGTCTTTGATCTGATCATAGGA GAGGATAAGACGAAGGTGCATGAGATGCTCAAGAAGTTTATTAAGATGATTTGTTATAGA TTGGACAATGAGAAATCATTGTGGTTAGCAGAGTTCGTAGATTTCAGAGTGGGTGATGAA TTCAACTACTTGCAAGCAAAAACTTTGGTAAAGTTGGCTGTGTCCTGCTTGGAAGAAGAT AGGAAGAAAAGGCCAACAATGGAATCAATAGTCGAGAGCCTCCTTTCAGTTGATTTAGCT AGAAGTTAA

Peptide Sequence

PEP ID	Os12t0130200-00
PEP Infomation	pep chromosome:IRGSP-1.0:12:1457706:1459747:1 gene:Os12g0130200 transcript:Os12t0130200-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to D-mannose binding lectin family protein, expressed. (Os12t0130200-00)
Sequence	ILSLIYDDANVSGVYWPDPDYLYYENNRNLYNSTRIGSLDDYGEFFSSDLAKHQARVASD RSLGIKRRLTLDYDGNLRLYSLNNSDGTWTISWIAQPQTCMTHGLCGPYGICHYSPTPRC SCPPGYKMRNPGNWTQGCKPIVEIACDGKQNVTFLQLRNTDFWGSDQQHIEKVPWEVCWN TCISDCTCKEFQYQEGNGTCYPKSFLFNGRTFPTPFVRTMYIKLPSSLDVSKKPIPQSSI HDYTPSRLDCDRVNTITTEAVRNMNKIGGEEPKWFYFYGFIGVFFIVEVFFFAFAWFLVL RKEMWSSEVWAAEEGYRVMTSHFRMYSYRELVKATERFKHELGWGGSGVVYKGILDDDRA VVIKKLENVTRNREEFQDELHVISRINHMNLVRIYCFCSERFHRLLVLEYVENGSLANVL FNSKILLDWKQRFNIALGVAKGLAYLHHECLEWVIHCNLKPENILLDENLEPKIADFGLA KLLSRSGSKQNVSRARGTIGYIAPEWISGLPITAKVDVYSYGVVLLELVSGKRVFDLIIG EDKTKVHEMLKKFIKMICYRLDNEKSLWLAEFVDFRVGDEFNYLQAKTLVKLAVSCLEED RKKRPTMESIVESLLSVDLARS

Transcript Sequence

Transcript ID	Os12t0130200-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:12:1457706:1459747:1 gene:Os12g0130200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to D-mannose binding lectin family protein, expressed. (Os12t0130200-00)
Sequence	ACACTGGTAACCTTGTCTTGAAAAACTCCAGTGAAAACATTGTTTGGCAAAGTTTCGATT CACCGACAGACACTTTGCTTCCTACTCAACGCATTCTCGCTACAACAAAGTTAGTCTCTA CCACTGGGTTACAGGTTCCTGGTCACTATTCCTTCCGTTTCAGCGATCAGTAGATATTGT CACTTATATATGATGACGCTAATGTTTCCGGTGTATACTGGCCAGATCCTGATTACCTGT ACTATGAGAATAATAGGAACCTTTATAACAGTACAAGGATAGGTAGTCTTGATGATTATG GAGAATTTTTTTCGAGTGATCTTGCTAAGCATCAAGCCCGTGTTGCCTCTGATAGAAGTT TGGGGATTAAAAGGAGGCTTACCTTGGATTATGATGGTAATCTTAGACTCTATAGCTTGA ATAACTCAGATGGAACATGGACAATTTCATGGATTGCTCAACCTCAAACATGCATGACTC ATGGTTTGTGTGGTCCATATGGAATCTGCCACTATTCACCTACACCAAGATGTTCATGCC CACCTGGTTATAAGATGAGGAATCCGGGTAACTGGACACAAGGTTGCAAGCCTATTGTCG AAATTGCATGCGATGGTAAACAGAATGTAACATTTTTGCAACTTCGAAACACTGATTTTT GGGGTTCTGATCAACAACATATTGAAAAGGTACCCTGGGAGGTGTGTTGGAACACTTGCA TAAGTGATTGCACATGTAAGGAATTTCAGTACCAAGAAGGAAATGGTACATGCTATCCAA AATCTTTTCTCTTTAATGGAAGGACTTTCCCGACACCTTTTGTGCGAACGATGTATATCA AACTTCCTTCAAGTTTGGATGTTTCTAAAAAACCCATTCCACAGTCTAGTATACATGATT ATACACCAAGTAGACTTGACTGTGATCGTGTAAACACAATAACCACAGAGGCAGTTCGTA ACATGAATAAGATTGGTGGGGAGGAACCAAAATGGTTCTACTTCTATGGGTTTATCGGTG TGTTTTTCATTGTTGAGGTTTTCTTCTTCGCATTTGCATGGTTCCTTGTCTTGAGGAAGG AGATGTGGTCATCTGAAGTATGGGCAGCTGAGGAAGGCTACAGGGTGATGACTAGTCATT TTCGAATGTATAGTTATAGAGAGCTGGTTAAGGCAACTGAAAGGTTTAAACATGAGCTTG GATGGGGAGGTTCAGGAGTCGTCTATAAGGGAATATTGGATGACGATCGAGCAGTGGTCA TAAAAAAGTTGGAAAATGTCACGCGAAATAGGGAGGAGTTTCAGGATGAGTTGCATGTTA TTTCAAGAATCAACCATATGAACCTAGTAAGAATTTATTGTTTTTGCTCAGAAAGATTCC ATAGGTTGCTGGTCTTAGAGTATGTTGAGAATGGATCATTGGCTAATGTACTGTTCAACA GTAAAATCTTGTTAGATTGGAAGCAAAGGTTTAATATTGCTTTAGGCGTTGCAAAGGGAC TGGCTTATCTTCACCATGAGTGCCTAGAGTGGGTCATTCACTGCAACCTAAAGCCAGAGA ACATTTTGCTGGATGAGAACTTAGAACCTAAGATCGCTGACTTTGGGTTGGCAAAGCTGC TTAGTAGATCTGGCTCTAAGCAGAATGTTTCACGAGCACGAGGGACCATAGGTTACATTG CTCCAGAATGGATATCTGGTTTACCAATAACAGCAAAGGTTGATGTATATAGTTATGGAG TCGTTCTTCTTGAGCTAGTGTCAGGAAAACGAGTCTTTGATCTGATCATAGGAGAGGATA AGACGAAGGTGCATGAGATGCTCAAGAAGTTTATTAAGATGATTTGTTATAGATTGGACA ATGAGAAATCATTGTGGTTAGCAGAGTTCGTAGATTTCAGAGTGGGTGATGAATTCAACT ACTTGCAAGCAAAAACTTTGGTAAAGTTGGCTGTGTCCTGCTTGGAAGAAGATAGGAAGA AAAGGCCAACAATGGAATCAATAGTCGAGAGCCTCCTTTCAGTTGATTTAGCTAGAAGTT AA