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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os12t0129000-01
CDS Infomation

cds chromosome:IRGSP-1.0:12:1387551:1391270:-1 gene:Os12g0129000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Uncharacterised protein family UPF0414 domain containing protein. (Os12t0129000-01)
Sequence

ATGTCAAATAGTAAAAAAAAAAAAATCCCCAATCCCCCTGCCTATCGCGTTTCCCCACCC
CCGATCCGCCGCTCCCCTCGCCCTCCTCCGCGCCGCGACCGATCTCCACCTCGACGGCCG
CCTGCGCGCCGCCACCGAGTCCTCCGCGGCTGCCACCACCTCCTGAATCCGGCCTCCCAC
CACCCCATCGCACGGTGGCCTCCGTCGTCGACAGTTTGTCTCCTTTCTCCCCTTCATCAC
CGAGGGACATCTCCATCTAGGAAAAAAAGACACTGCACTATGGCGTCTAGACGCAATGTT
CGGGGGTATGCTCCCCTTCCTACAGAGGACAGGGATGACAGCAATCTTACTGATGATGTT
GACCTTCGGTTCACTTACACCCCAAAATCCCTCAGGAAAATCCCGTGGAAGTCAATTGCC
CTGGCACTATTCCTCCTCCTCCTAGGATGTTCGCTTCTCTTCCTGTCATATTTTATATTC
ACAGGTCACATGGAGGGGGATAACTCTCAGGCATATGGTCTCTTGTTCCTGGGCATCCTT
GCCTTCCTTCCTGGTTTTTATGAGACTCGAGTTGCTTACTATTCCTCGAGAGGAGCACCA
GGGTATACCTTTGCATCTATTCCAGATTATTAA

Peptide Sequence

PEP ID

Os12t0129000-01
PEP Infomation

pep chromosome:IRGSP-1.0:12:1387551:1391270:-1 gene:Os12g0129000 transcript:Os12t0129000-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Uncharacterised protein family UPF0414 domain containing protein. (Os12t0129000-01)
Sequence

MSNSKKKKIPNPPAYRVSPPPIRRSPRPPPRRDRSPPRRPPARRHRVLRGCHHLLNPASH
HPIARWPPSSTVCLLSPLHHRGTSPSRKKRHCTMASRRNVRGYAPLPTEDRDDSNLTDDV
DLRFTYTPKSLRKIPWKSIALALFLLLLGCSLLFLSYFIFTGHMEGDNSQAYGLLFLGIL
AFLPGFYETRVAYYSSRGAPGYTFASIPDY

Transcript Sequence

Transcript ID

Os12t0129000-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:12:1387551:1391270:-1 gene:Os12g0129000 gene_biotype:protein_coding transcript_biotype:protein_coding description:Uncharacterised protein family UPF0414 domain containing protein. (Os12t0129000-01)
Sequence

GGAAAGATGTCAAATAGTAAAAAAAAAAAAATCCCCAATCCCCCTGCCTATCGCGTTTCC
CCACCCCCGATCCGCCGCTCCCCTCGCCCTCCTCCGCGCCGCGACCGATCTCCACCTCGA
CGGCCGCCTGCGCGCCGCCACCGAGTCCTCCGCGGCTGCCACCACCTCCTGAATCCGGCC
TCCCACCACCCCATCGCACGGTGGCCTCCGTCGTCGACAGTTTGTCTCCTTTCTCCCCTT
CATCACCGAGGGACATCTCCATCTAGGAAAAAAAGACACTGCACTATGGCGTCTAGACGC
AATGTTCGGGGGTATGCTCCCCTTCCTACAGAGGACAGGGATGACAGCAATCTTACTGAT
GATGTTGACCTTCGGTTCACTTACACCCCAAAATCCCTCAGGAAAATCCCGTGGAAGTCA
ATTGCCCTGGCACTATTCCTCCTCCTCCTAGGATGTTCGCTTCTCTTCCTGTCATATTTT
ATATTCACAGGTCACATGGAGGGGGATAACTCTCAGGCATATGGTCTCTTGTTCCTGGGC
ATCCTTGCCTTCCTTCCTGGTTTTTATGAGACTCGAGTTGCTTACTATTCCTCGAGAGGA
GCACCAGGGTATACCTTTGCATCTATTCCAGATTATTAACCTTCCATTGTTTTCATTTGT
CTCACCAAGGGACAGTGGCGATAGAACATGGGCAAAAACTTCAGGATGCAGGAATCAAAA
TGAGCTCTTTATTTTATTACCACTAAAATGTTAACATCTAAATGAAGTCAGCTGCTGACT
TCTGTGTTCACCCGATGGCATTGCTCACCAGGTGTCACTTATCTGTGCTGTACAGACAAA
GTAAACTCGTGATCATACTCGTCTCTTGCTACATACTCCAGATGTAGATGGCTGTTTGTC
ACCAGGAGTAGATGGCTGTTTTAAAGTTGCCGCATATTTTTATTCCACAATTCCATTGTA
TTTTGTGTTGGTATCATTAAGGTTTTTATTTTGGCTGCAGAAATAGTATAACCATACTTT
CATCTATATATTCAAGCTCTTATAGCAGCTGATGGCAATGTGTATCATTTTGTACTGCTT
TTCTCTATGATGATATTTGTATGGATAAATTCCTTCTGTGCTACTGGAAGGAAATCAATT
CCTTTGC