Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os12t0128700-01
CDS Infomation	cds chromosome:IRGSP-1.0:12:1359827:1366366:1 gene:Os12g0128700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Arabinoxylan arabinofuranohydrolase isoenzyme AXAH-II. (Os12t0128700-01)
Sequence	ATGGGTTCCAGAGAACCCTTCCTGAGTGCCATCTTCTTCTTCTTCTTCTTGCTTTTGTTC TGCCTCGGCTGCAAGTGTATAGCTTCAGAGTTACACTTACACACGACCCAGACTGCGGTC CTCAAGGTTGATGCCTCACTGCAACATGCTCGACAGATCCCCGACACGCTATTTGGAATA TTTTTTGAGGAAATCAACCATGCAGGAGCTGGTGGAATATGGGCTGAACTTGTTAGTAAC AGAGGTTTTGAAGCTGGAGGCCCTCATACCCCATCAAACATTGATCCATGGTCCATAATT GGAGATGACTCTTCCATATTTGTGGCGACTGATCGAACGTCATGTTTCAGTCGGAATACT GTTGCTCTAAGGATGGAGGTTCTCTGTGACAATTGCCCAGCTGGTGGTGTTGGCATTTAT AACCCAGGATTCTGGGGCATGAACATAGAAGATGGAAAGACCTACAATTTAGTGATGTAT GTTAAATCACCAGAAACTGTGGAGTTGACAGTTTCCTTGACAAGTTCTGATGGGTCGCAA AATCTGGCTTCAAGTACCATACCGGTTTCTGGTGCGTCGAATTGGACAAAACTGGAGCAG AAGTTGGTTGCTAAAGGAACAAATAGAACCTCAAGGCTTCAAATAACAACTACCAAGAAG GGAGTTGTATGGTTTGATCAAGTCTCTCTCATGTCTGCAGACACTTACAAGGGACATGGT TTTCGCACAGAACTAATATCTATGATGTTGGACTTAAAACCACGATTCTTGAGATTCCCT GGAGGTTGCTTCGTGGAGGGTGAATGGTTAAGAAACGCATTCAGGTGGAGGGAATCTATT GGTCCATGGGAAGAGAGGCCTGGACACTTTGGGGATGTTTGGCATTACTGGACTGATGAT GGCCTTGGATATTATGAGTTTCTCCAGCTTTCTGAGGACCTGGGCGCTGCCCCAATCTGG GTGTTTAACAATGGAATCAGCCATAATGATGAAGTTGATACTGCTGCAATTGCTCCTTTT GTAAAAGACGTATTGGACAGTCTAGAATTTGCAAGGGGGAGTGCAGATTCGACATGGGGT TCTGTTAGAGCTGCAATGGGGCACCCTGAACCATTCCCTGTCAAATACGTTGCAATTGGA AATGAAGATTGTGGGAAAAAATTTTACCGCGGTAATTACCTCAAGTTTTATAATGCTATA AGGGAGGCCTATCCGGACATTCAAATGATTTCAAATTGTGATGCTTCATCAAGACCACTT GACCATCCTGCTGATTTATATGACTTCCATGTCTATACTGATTCTAAGACTTTGTTTTCG ATGAAGAGTGCATTTGATAGATCATCTCGTAATGGGCCCAAGGCTTTTGTCAGTGAATAT GCTGTTTGGAGAAGTGATGCAGGTAGAGGAAGTCTACTTGCTTCATTGGCAGAAGCTGCT TTCCTTACTGGACTGGAGAAGAATAGTGATGTTGTTCAGATGGCAAGTTATGCACCACTG TTCGTGAACAACAATGATCAAACGTGGAACCCAGACGCCATTGTATTTAACTCCTGGCAA CAATACGGAACTCCTAGTTACTGGATGCAGACTCTTTTCCGTGAATCTAGCGGTGCTATG TTTCATCCAATTACAATCACTTCCAGCTACTCTGGTTCTCTGGCAGCATCTGCAATTACT TGGCAGGATTCTGAAAATAGCTTCTTAAGAGTAAAGATTATAAACTTTGGGTCTGATCCA GTGAGCCTCACGATCTCTGCAACTGGGCTTCAGGCCCGTGTTAACGCACTGGGATCAACT GCCACTGTTATCACATCCAGCAATGTGATGGATGAGAACTCTTTTAGTAACCCGAATAAG GTTGTTCCTGTCAAAAGCCAGCTTTCCAATGCAGCAGAGCAGATGCAAGTCACGCTTGCT CCTCACTCTTTCTCCTCATTCGATCTTGCGCTTGCCCAGTCCAAACTCGTGGCAGAGATG TGA

Peptide Sequence

PEP ID	Os12t0128700-01
PEP Infomation	pep chromosome:IRGSP-1.0:12:1359827:1366366:1 gene:Os12g0128700 transcript:Os12t0128700-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Arabinoxylan arabinofuranohydrolase isoenzyme AXAH-II. (Os12t0128700-01)
Sequence	MGSREPFLSAIFFFFFLLLFCLGCKCIASELHLHTTQTAVLKVDASLQHARQIPDTLFGI FFEEINHAGAGGIWAELVSNRGFEAGGPHTPSNIDPWSIIGDDSSIFVATDRTSCFSRNT VALRMEVLCDNCPAGGVGIYNPGFWGMNIEDGKTYNLVMYVKSPETVELTVSLTSSDGSQ NLASSTIPVSGASNWTKLEQKLVAKGTNRTSRLQITTTKKGVVWFDQVSLMSADTYKGHG FRTELISMMLDLKPRFLRFPGGCFVEGEWLRNAFRWRESIGPWEERPGHFGDVWHYWTDD GLGYYEFLQLSEDLGAAPIWVFNNGISHNDEVDTAAIAPFVKDVLDSLEFARGSADSTWG SVRAAMGHPEPFPVKYVAIGNEDCGKKFYRGNYLKFYNAIREAYPDIQMISNCDASSRPL DHPADLYDFHVYTDSKTLFSMKSAFDRSSRNGPKAFVSEYAVWRSDAGRGSLLASLAEAA FLTGLEKNSDVVQMASYAPLFVNNNDQTWNPDAIVFNSWQQYGTPSYWMQTLFRESSGAM FHPITITSSYSGSLAASAITWQDSENSFLRVKIINFGSDPVSLTISATGLQARVNALGST ATVITSSNVMDENSFSNPNKVVPVKSQLSNAAEQMQVTLAPHSFSSFDLALAQSKLVAEM

Transcript Sequence

Transcript ID	Os12t0128700-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:12:1359827:1366366:1 gene:Os12g0128700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Arabinoxylan arabinofuranohydrolase isoenzyme AXAH-II. (Os12t0128700-01)
Sequence	GTCCTGCTCCTAATCCTCGCGGCAGCTTGCTTGGCGCTCGCCTCCCTCGGCCGCACTTCT TTCTTCCTGATTCCTGACGTCTTGGATGGTGCGCTTTATTATGACACACGACCTGCACTA GTGTTTACAGCTCCAAGTATGGGTTCCAGAGAACCCTTCCTGAGTGCCATCTTCTTCTTC TTCTTCTTGCTTTTGTTCTGCCTCGGCTGCAAGTGTATAGCTTCAGAGTTACACTTACAC ACGACCCAGACTGCGGTCCTCAAGGTTGATGCCTCACTGCAACATGCTCGACAGATCCCC GACACGCTATTTGGAATATTTTTTGAGGAAATCAACCATGCAGGAGCTGGTGGAATATGG GCTGAACTTGTTAGTAACAGAGGTTTTGAAGCTGGAGGCCCTCATACCCCATCAAACATT GATCCATGGTCCATAATTGGAGATGACTCTTCCATATTTGTGGCGACTGATCGAACGTCA TGTTTCAGTCGGAATACTGTTGCTCTAAGGATGGAGGTTCTCTGTGACAATTGCCCAGCT GGTGGTGTTGGCATTTATAACCCAGGATTCTGGGGCATGAACATAGAAGATGGAAAGACC TACAATTTAGTGATGTATGTTAAATCACCAGAAACTGTGGAGTTGACAGTTTCCTTGACA AGTTCTGATGGGTCGCAAAATCTGGCTTCAAGTACCATACCGGTTTCTGGTGCGTCGAAT TGGACAAAACTGGAGCAGAAGTTGGTTGCTAAAGGAACAAATAGAACCTCAAGGCTTCAA ATAACAACTACCAAGAAGGGAGTTGTATGGTTTGATCAAGTCTCTCTCATGTCTGCAGAC ACTTACAAGGGACATGGTTTTCGCACAGAACTAATATCTATGATGTTGGACTTAAAACCA CGATTCTTGAGATTCCCTGGAGGTTGCTTCGTGGAGGGTGAATGGTTAAGAAACGCATTC AGGTGGAGGGAATCTATTGGTCCATGGGAAGAGAGGCCTGGACACTTTGGGGATGTTTGG CATTACTGGACTGATGATGGCCTTGGATATTATGAGTTTCTCCAGCTTTCTGAGGACCTG GGCGCTGCCCCAATCTGGGTGTTTAACAATGGAATCAGCCATAATGATGAAGTTGATACT GCTGCAATTGCTCCTTTTGTAAAAGACGTATTGGACAGTCTAGAATTTGCAAGGGGGAGT GCAGATTCGACATGGGGTTCTGTTAGAGCTGCAATGGGGCACCCTGAACCATTCCCTGTC AAATACGTTGCAATTGGAAATGAAGATTGTGGGAAAAAATTTTACCGCGGTAATTACCTC AAGTTTTATAATGCTATAAGGGAGGCCTATCCGGACATTCAAATGATTTCAAATTGTGAT GCTTCATCAAGACCACTTGACCATCCTGCTGATTTATATGACTTCCATGTCTATACTGAT TCTAAGACTTTGTTTTCGATGAAGAGTGCATTTGATAGATCATCTCGTAATGGGCCCAAG GCTTTTGTCAGTGAATATGCTGTTTGGAGAAGTGATGCAGGTAGAGGAAGTCTACTTGCT TCATTGGCAGAAGCTGCTTTCCTTACTGGACTGGAGAAGAATAGTGATGTTGTTCAGATG GCAAGTTATGCACCACTGTTCGTGAACAACAATGATCAAACGTGGAACCCAGACGCCATT GTATTTAACTCCTGGCAACAATACGGAACTCCTAGTTACTGGATGCAGACTCTTTTCCGT GAATCTAGCGGTGCTATGTTTCATCCAATTACAATCACTTCCAGCTACTCTGGTTCTCTG GCAGCATCTGCAATTACTTGGCAGGATTCTGAAAATAGCTTCTTAAGAGTAAAGATTATA AACTTTGGGTCTGATCCAGTGAGCCTCACGATCTCTGCAACTGGGCTTCAGGCCCGTGTT AACGCACTGGGATCAACTGCCACTGTTATCACATCCAGCAATGTGATGGATGAGAACTCT TTTAGTAACCCGAATAAGGTTGTTCCTGTCAAAAGCCAGCTTTCCAATGCAGCAGAGCAG ATGCAAGTCACGCTTGCTCCTCACTCTTTCTCCTCATTCGATCTTGCGCTTGCCCAGTCC AAACTCGTGGCAGAGATGTGAAGCAGGAACACAAGGTTAGCGACAGAAACACAAGAAATA CACGAGATGTGATATGCGAATACCAGAATGCAGTCCATATATGTGCATGTATCTTGAAGC ACTACTGTATAGTGTAATACACAGGAAATGATGAATAAAATTCACTCCAGGC