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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os12t0127800-01
CDS Infomation

cds chromosome:IRGSP-1.0:12:1332841:1333568:1 gene:Os12g0127800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:VQ motif-containing protein 39 description:Similar to VQ motif family protein. (Os12t0127800-01)
Sequence

ATGCTCACCGCCGCCATGCACATGCTCGACTCCTCCACCTCCTCCTCCCCTTGGCTTCCT
CCCGACCTCATGCCTCCCCCGCCGCCGCCGCCGCCCGCCGCCGCCACTCTCCACCACCAC
TTCCGCGCCGCCGCCGCCGCCCCCGGCCGCCGCCGCATCGCCAAGCGCCGACCGCGCCCG
TCGCGGCGCCTTCCCACCACCTACATCAGCGCCGACCCGGCAAACTTCCGCCGCATGGTG
CACCAGGTCACCGGCGCCGACGACCTCCCTCCCCCTCCTCCATCGCTCTCTCTACAGCAG
ACGACGGAGCTCCTCCTCCCGGCCGTGCACGCCGCTCCAGCGGGCTCGCCCGGCGCTGCA
GGCGCGCTGATGCTTCCCACGCTCGACACCTCGGCGTTCCTGCTCGGCCGCCGCGCGGAG
CCGGCGGCCGCGGCGCCGCCGTGCGACGAGTCGGTGGCGTTGGTAAGAGGAGGAGCGGGT
AATTACGGCAGCAACAACAATAGCATTAGCAGCAGTAGCAGCAGCGGCAACTGTGGTGGT
GGCTTCCCCACCTTGGACTCATGGGATCTCCTGTAA

Peptide Sequence

PEP ID

Os12t0127800-01
PEP Infomation

pep chromosome:IRGSP-1.0:12:1332841:1333568:1 gene:Os12g0127800 transcript:Os12t0127800-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:VQ motif-containing protein 39 description:Similar to VQ motif family protein. (Os12t0127800-01)
Sequence

MLTAAMHMLDSSTSSSPWLPPDLMPPPPPPPPAAATLHHHFRAAAAAPGRRRIAKRRPRP
SRRLPTTYISADPANFRRMVHQVTGADDLPPPPPSLSLQQTTELLLPAVHAAPAGSPGAA
GALMLPTLDTSAFLLGRRAEPAAAAPPCDESVALVRGGAGNYGSNNNSISSSSSSGNCGG
GFPTLDSWDLL

Transcript Sequence

Transcript ID

Os12t0127800-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:12:1332841:1333568:1 gene:Os12g0127800 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:VQ motif-containing protein 39 description:Similar to VQ motif family protein. (Os12t0127800-01)
Sequence

TCCCCAGTCAAGTTCGCCGCGCGCAACACTCGCAGCAGAGCATCCACCCATCGTCGATGC
TCACCGCCGCCATGCACATGCTCGACTCCTCCACCTCCTCCTCCCCTTGGCTTCCTCCCG
ACCTCATGCCTCCCCCGCCGCCGCCGCCGCCCGCCGCCGCCACTCTCCACCACCACTTCC
GCGCCGCCGCCGCCGCCCCCGGCCGCCGCCGCATCGCCAAGCGCCGACCGCGCCCGTCGC
GGCGCCTTCCCACCACCTACATCAGCGCCGACCCGGCAAACTTCCGCCGCATGGTGCACC
AGGTCACCGGCGCCGACGACCTCCCTCCCCCTCCTCCATCGCTCTCTCTACAGCAGACGA
CGGAGCTCCTCCTCCCGGCCGTGCACGCCGCTCCAGCGGGCTCGCCCGGCGCTGCAGGCG
CGCTGATGCTTCCCACGCTCGACACCTCGGCGTTCCTGCTCGGCCGCCGCGCGGAGCCGG
CGGCCGCGGCGCCGCCGTGCGACGAGTCGGTGGCGTTGGTAAGAGGAGGAGCGGGTAATT
ACGGCAGCAACAACAATAGCATTAGCAGCAGTAGCAGCAGCGGCAACTGTGGTGGTGGCT
TCCCCACCTTGGACTCATGGGATCTCCTGTAAATCTAGATCATATATTGTCGATTTCTAT
CGATTTCTGATTCTTCATGGCTGTAATTAACTAAGACGAGATCAATGAACAGGTTGGAGC
ATCTATCT