Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os12t0127500-01
CDS Infomation

cds chromosome:IRGSP-1.0:12:1317605:1319863:1 gene:Os12g0127500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os12t0127500-01)
Sequence

ATGGCGAAGCGGCGGGCAGAGTCCGAGCTTGAGCTGGTGGAGGCGGAAGCGGAAGCGGAG
GCGGAGGCGGAGGCGGAGAAGAATGGGAGGCGAGCAGCAGGTAGTCAGGACGGGGTGAAT
CGCGCGTTCATCCTCGAGTGCAGCAAACATAGCGATGGATCGATCTACAGCGGCGACGAT
TTTTGGCACAGATTTTACAAGGTCGCCGATACCCGAGAGACTCGTATGGAGGCAATGATG
CTGTCAAACCCAACCAATTGCCGGCCACACATGTGGGCTTGCAAGGCGCACAGTGTGCAA
TTCATGATGCAGATATTCTCGCTCAAGCTATCCAATATCACTGCTGCTGTTGATGGCCCA
GTTCACTTGTATGGATACTTTGCTGTCCGGGATCATTTGGACCCGCTACGCAACTACATC
TTCAACCGCACCAGGGATGACCCTTTCATCATGGGGCAAGACAATGGCGTTGATTCGGAT
AATTCATTGATACCAATGTCAGGCCCCAAGAGAGGCATTGGAAACCAAGTTCGTGTGCTC
ATCGAGTTCGACATGAAGATCAAGAACGGAGAGACACAAGACGATGATTTTCAGCTCATC
GATGGTGCCATTATCTGCAGCGAATTCGTGCTTCCCGATAGAGTGTTTACGCAACGGATT
GAGGGTGATTGTGGTGCGGTCGACATTAGTCGAGCCCTTTTTCACGAAGCAGTGGAGGCC
ACAATACAAGTTAGCATATCACAAGTGCATGTCAATGGCTTGAGCTTATCTTTATATTCT
TATACCAGTCGAATCCCTGAAAAGATTCGGCTCTTTGATGGTGTCATTTCCAAGCCATGT
GACCTGAATAGGGTAGTTGCTGTGGTGGAGAATACACCTTTGTTTTTAATCTTCAGGGCT
GTTCATAGGGATGGCTCGGATTATGATATCCCTAAATACTGTCCATTGGTCTTCAAGGTT
GATCAGGGGGATGGCTCGTATCGTGTCTCTGAATATTGTCCATTCAAAGCTAGAAGACAT
GGATATGACATGAAAGAGCTTAAACTTGGTGGCGCCCGTGTACTGTTGAAGGTGTCTTGG
TCAACTTTGAAGTGA

Peptide Sequence

PEP ID

Os12t0127500-01
PEP Infomation

pep chromosome:IRGSP-1.0:12:1317605:1319863:1 gene:Os12g0127500 transcript:Os12t0127500-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os12t0127500-01)
Sequence

MAKRRAESELELVEAEAEAEAEAEAEKNGRRAAGSQDGVNRAFILECSKHSDGSIYSGDD
FWHRFYKVADTRETRMEAMMLSNPTNCRPHMWACKAHSVQFMMQIFSLKLSNITAAVDGP
VHLYGYFAVRDHLDPLRNYIFNRTRDDPFIMGQDNGVDSDNSLIPMSGPKRGIGNQVRVL
IEFDMKIKNGETQDDDFQLIDGAIICSEFVLPDRVFTQRIEGDCGAVDISRALFHEAVEA
TIQVSISQVHVNGLSLSLYSYTSRIPEKIRLFDGVISKPCDLNRVVAVVENTPLFLIFRA
VHRDGSDYDIPKYCPLVFKVDQGDGSYRVSEYCPFKARRHGYDMKELKLGGARVLLKVSW
STLK

Transcript Sequence

Transcript ID

Os12t0127500-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:12:1317605:1319863:1 gene:Os12g0127500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os12t0127500-01)
Sequence

AATACGAATCGGTTTCGGATTTGTTGCCGCAAAAATCAAAATAAAACCCGGGTGGAGGAG
GAGGGAGAAGATGAAGCAAACGAGAGAGATCGAGCTTGAGGCCGGGTGGAATCGCGAGGG
GATGTCATGGCGAAGCGGCGGGCAGAGTCCGAGCTTGAGCTGGTGGAGGCGGAAGCGGAA
GCGGAGGCGGAGGCGGAGGCGGAGAAGAATGGGAGGCGAGCAGCAGGTAGTCAGGACGGG
GTGAATCGCGCGTTCATCCTCGAGTGCAGCAAACATAGCGATGGATCGATCTACAGCGGC
GACGATTTTTGGCACAGATTTTACAAGGTCGCCGATACCCGAGAGACTCGTATGGAGGCA
ATGATGCTGTCAAACCCAACCAATTGCCGGCCACACATGTGGGCTTGCAAGGCGCACAGT
GTGCAATTCATGATGCAGATATTCTCGCTCAAGCTATCCAATATCACTGCTGCTGTTGAT
GGCCCAGTTCACTTGTATGGATACTTTGCTGTCCGGGATCATTTGGACCCGCTACGCAAC
TACATCTTCAACCGCACCAGGGATGACCCTTTCATCATGGGGCAAGACAATGGCGTTGAT
TCGGATAATTCATTGATACCAATGTCAGGCCCCAAGAGAGGCATTGGAAACCAAGTTCGT
GTGCTCATCGAGTTCGACATGAAGATCAAGAACGGAGAGACACAAGACGATGATTTTCAG
CTCATCGATGGTGCCATTATCTGCAGCGAATTCGTGCTTCCCGATAGAGTGTTTACGCAA
CGGATTGAGGGTGATTGTGGTGCGGTCGACATTAGTCGAGCCCTTTTTCACGAAGCAGTG
GAGGCCACAATACAAGTTAGCATATCACAAGTGCATGTCAATGGCTTGAGCTTATCTTTA
TATTCTTATACCAGTCGAATCCCTGAAAAGATTCGGCTCTTTGATGGTGTCATTTCCAAG
CCATGTGACCTGAATAGGGTAGTTGCTGTGGTGGAGAATACACCTTTGTTTTTAATCTTC
AGGGCTGTTCATAGGGATGGCTCGGATTATGATATCCCTAAATACTGTCCATTGGTCTTC
AAGGTTGATCAGGGGGATGGCTCGTATCGTGTCTCTGAATATTGTCCATTCAAAGCTAGA
AGACATGGATATGACATGAAAGAGCTTAAACTTGGTGGCGCCCGTGTACTGTTGAAGGTG
TCTTGGTCAACTTTGAAGTGATTTTGAATATTCCTGGGGTATACATAATCTATGCTAAGC
AGAAATAGCGATATTTCTGTGTATTGACTAGTAGGCAAATGTTTGGGCCTTATTTTGAGT
ACATATTTAAGTTTTTTATTTGTTGTAGAAGTTCGACAGGTGAAGGATGCCACACTCTTA
TCTGTTCTTATTTATTGCATATTAATGCAGATTAAATTTGGTATTGCT