Gene sequences

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SNP Detection
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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os12t0126800-01
CDS Infomation	cds chromosome:IRGSP-1.0:12:1292685:1300940:-1 gene:Os12g0126800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF618 domain containing protein. (Os12t0126800-01)
Sequence	ATGGCGGACACCAAGGCGGAGGCAAAGGCGGAAACTATCGGCGGCGGCGGCGGCGGCTCT GGCTCGTTCAGCGAGCAGGCGTTTGTTGAGAAGCTTAACAAGCTCAACAACACGGCGACT AGGATCCAGACACTTTCAAATTGGTGCATTTTTCACCGAAAGAGAGCCAGAAAGGTTGTT GATACATGGGAGAAGCAGTATAACAGTGCAAATAAGGATAAGAAAGTATCATTCCTGTAC CTGTCAAATGATATCCTGCAAAATAGTAAACGCAAGGGAGGGGAGTTTGTGAATGAATTT TGGAGGGTTCTTCCTGGATTATTGAAAGACTTTTATGTCAATGGGGGAGAAGATGGAAAG AAAGTAGTTGGAAGATTAATAGATATTTGGGATGAGCGGAAGGTCTTTGGAACCCGTATT GAAAGTCTGAAAAATGACATTCTTGGTGGTAGCACTCATACAATGGGTAACAATGTCAAT AGCTCAAATCCAAGCCCTAACCCCTCTTCAGTTTCCAAAGCTGCGCGGAAAGATTCTGGT ACAGTAACAAGAAAACTTACTGTTGGCGGGATGCCAGAAAAGATTGTAACAGCATATCAG TCAGTGCTTGATCAACATTTTGATGAAGACACAGCTTTAAACAAATGCAATAATGCTGTT AGTGTTTTGGATAGGATGGATAAAGATGTAGATGATGCTTGTACTCAAGGTATTCAGCAA GGATCATCGTTGATTTCTGACCTTCAAGGGCAGGAAACAGTCCTTAAGCAGTGCATTGAG CAACTTGAAAGTGTCAACATGGCTAGAATAACCCTAATCAATAAACTAAGAAAAGCCCTC GGCGAACAGGAAGCAAAGTCAGAGCTTCTTCGCAATCAGTTGCTTGTGGCTCGAGCAAAG GCTGAACATGCCATGCAACTAAAACAACGACTTGGTAGTGCCTTGAACAATGGTGCAGGA TCTAGTTCTAGTCCACTGATGGTTACACTTCCACCAGGACAAACAGCTGCCATGATGCAG AATTCAGCAGCAATGCCGATATTTCCCCAGTTTCAACCACTGCATCCAGCAACCTCACTT CCTGCCACATCCAGTGCTGTTGGTGATGAGCCCAAAAAAACTGCAGCAGCTATGGCAGAT AAGCTTGCATCTTTGTCAGCTCCTGAGAAGGTGCTCTCCTCCATTTTCTCTTCCCTTGCT GCTGAACAAGCAAGGAATAGTGGTTCGACTTCTGGAGATCTTTCTGCAGGACCTCCAGGC TTTGAGAGCAATAAGAAGCCTAGGCTTGACAACCCCATTCATGCTAGTGACATGAGTGCT CCCCCATTCTTTGGGCAACTGCCGCAGGTGCAACCACAGATTGGAGCAACAGCTGCTCTT GGAGGCACACAGCCACCAACCCAAGCAAACCAAGCAGCTGGTTCATTTCCACCACCTCCA CCTCCATTACCACTTATGCCACAATTTGTTCAAAATACTGGAGGAATGTTTGGAATGGGA CCTTTTGGGATGGTGAGTGGCTCTGCGCCACCTCCACCCCCATTGCCCAACATTATGTCA GCAGGTTTTCCAAGACTAAGTGTGCCTCCACCTCTGCCTCTGCCTACACAATCTCAGAAC CAGAGCCAGCCCCAGCAGCAGCAGTCTCCACAGGCACCACAGCAATCGCCGACCTCGACT GGATTTTTTCAACCACCAGGTGCTGGGTTCTTCCCACCAGTGCAGGTTCAGCAATCTCCA TCTGCCCAACGGCAATGA

Peptide Sequence

PEP ID	Os12t0126800-01
PEP Infomation	pep chromosome:IRGSP-1.0:12:1292685:1300940:-1 gene:Os12g0126800 transcript:Os12t0126800-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF618 domain containing protein. (Os12t0126800-01)
Sequence	MADTKAEAKAETIGGGGGGSGSFSEQAFVEKLNKLNNTATRIQTLSNWCIFHRKRARKVV DTWEKQYNSANKDKKVSFLYLSNDILQNSKRKGGEFVNEFWRVLPGLLKDFYVNGGEDGK KVVGRLIDIWDERKVFGTRIESLKNDILGGSTHTMGNNVNSSNPSPNPSSVSKAARKDSG TVTRKLTVGGMPEKIVTAYQSVLDQHFDEDTALNKCNNAVSVLDRMDKDVDDACTQGIQQ GSSLISDLQGQETVLKQCIEQLESVNMARITLINKLRKALGEQEAKSELLRNQLLVARAK AEHAMQLKQRLGSALNNGAGSSSSPLMVTLPPGQTAAMMQNSAAMPIFPQFQPLHPATSL PATSSAVGDEPKKTAAAMADKLASLSAPEKVLSSIFSSLAAEQARNSGSTSGDLSAGPPG FESNKKPRLDNPIHASDMSAPPFFGQLPQVQPQIGATAALGGTQPPTQANQAAGSFPPPP PPLPLMPQFVQNTGGMFGMGPFGMVSGSAPPPPPLPNIMSAGFPRLSVPPPLPLPTQSQN QSQPQQQQSPQAPQQSPTSTGFFQPPGAGFFPPVQVQQSPSAQRQ

Transcript Sequence

Transcript ID	Os12t0126800-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:12:1292685:1300940:-1 gene:Os12g0126800 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF618 domain containing protein. (Os12t0126800-01)
Sequence	CAAGAGGCTTGCAGGTTGCAGCGAACACACGCAGCACGGAAAGGGGAAAAAAAAACCAAA CCCTCTCGTCCTCCCCTTCCCCGCCCACCCCGGCCTCGCCGCCCCCTTCCCGTCGTTCAC CGGCGGCGAATTCAAGCTGACGAGCTCGCCACCGGGGGGGGGATTTAGGATTGGTTCGAT CTTGGCCGGCCAAGAAGTACAAGTTTCTTCGGGGGATTAGCTTGTTCGCGAGGGGGAGGA GTTCGGTGGTGGAGCCTTCGCCTTCGTGATGGCGGACACCAAGGCGGAGGCAAAGGCGGA AACTATCGGCGGCGGCGGCGGCGGCTCTGGCTCGTTCAGCGAGCAGGCGTTTGTTGAGAA GCTTAACAAGCTCAACAACACGGCGACTAGGATCCAGACACTTTCAAATTGGTGCATTTT TCACCGAAAGAGAGCCAGAAAGGTTGTTGATACATGGGAGAAGCAGTATAACAGTGCAAA TAAGGATAAGAAAGTATCATTCCTGTACCTGTCAAATGATATCCTGCAAAATAGTAAACG CAAGGGAGGGGAGTTTGTGAATGAATTTTGGAGGGTTCTTCCTGGATTATTGAAAGACTT TTATGTCAATGGGGGAGAAGATGGAAAGAAAGTAGTTGGAAGATTAATAGATATTTGGGA TGAGCGGAAGGTCTTTGGAACCCGTATTGAAAGTCTGAAAAATGACATTCTTGGTGGTAG CACTCATACAATGGGTAACAATGTCAATAGCTCAAATCCAAGCCCTAACCCCTCTTCAGT TTCCAAAGCTGCGCGGAAAGATTCTGGTACAGTAACAAGAAAACTTACTGTTGGCGGGAT GCCAGAAAAGATTGTAACAGCATATCAGTCAGTGCTTGATCAACATTTTGATGAAGACAC AGCTTTAAACAAATGCAATAATGCTGTTAGTGTTTTGGATAGGATGGATAAAGATGTAGA TGATGCTTGTACTCAAGGTATTCAGCAAGGATCATCGTTGATTTCTGACCTTCAAGGGCA GGAAACAGTCCTTAAGCAGTGCATTGAGCAACTTGAAAGTGTCAACATGGCTAGAATAAC CCTAATCAATAAACTAAGAAAAGCCCTCGGCGAACAGGAAGCAAAGTCAGAGCTTCTTCG CAATCAGTTGCTTGTGGCTCGAGCAAAGGCTGAACATGCCATGCAACTAAAACAACGACT TGGTAGTGCCTTGAACAATGGTGCAGGATCTAGTTCTAGTCCACTGATGGTTACACTTCC ACCAGGACAAACAGCTGCCATGATGCAGAATTCAGCAGCAATGCCGATATTTCCCCAGTT TCAACCACTGCATCCAGCAACCTCACTTCCTGCCACATCCAGTGCTGTTGGTGATGAGCC CAAAAAAACTGCAGCAGCTATGGCAGATAAGCTTGCATCTTTGTCAGCTCCTGAGAAGGT GCTCTCCTCCATTTTCTCTTCCCTTGCTGCTGAACAAGCAAGGAATAGTGGTTCGACTTC TGGAGATCTTTCTGCAGGACCTCCAGGCTTTGAGAGCAATAAGAAGCCTAGGCTTGACAA CCCCATTCATGCTAGTGACATGAGTGCTCCCCCATTCTTTGGGCAACTGCCGCAGGTGCA ACCACAGATTGGAGCAACAGCTGCTCTTGGAGGCACACAGCCACCAACCCAAGCAAACCA AGCAGCTGGTTCATTTCCACCACCTCCACCTCCATTACCACTTATGCCACAATTTGTTCA AAATACTGGAGGAATGTTTGGAATGGGACCTTTTGGGATGGTGAGTGGCTCTGCGCCACC TCCACCCCCATTGCCCAACATTATGTCAGCAGGTTTTCCAAGACTAAGTGTGCCTCCACC TCTGCCTCTGCCTACACAATCTCAGAACCAGAGCCAGCCCCAGCAGCAGCAGTCTCCACA GGCACCACAGCAATCGCCGACCTCGACTGGATTTTTTCAACCACCAGGTGCTGGGTTCTT CCCACCAGTGCAGGTTCAGCAATCTCCATCTGCCCAACGGCAATGATGATTCTACAACAA TTGTTGGGCTATAAAGGAAGCACCTTGTGCTAACTTTGTATATTAAACAATAATCCCTGA GGATTGATCTGATAGTTGGCGAGTCCTGCATCGTGAAGCAGGATTAATGCTTATGAATTG GGAGGATTTGTAGGATAGGCTTGCGGCTTATGTGATGTACAACTGTTCCTTTTGGTCTGA GGAGTTTGTTCAACTCTTCTTGATTATGTGAAGTTAGTTAGACTTTACTTTTGTTTGCAT AGCCAGATCTTATTGTTAGTCCTGAGGCAAACAAATGTCGGCATTACATTTGTTACTTAA AGAGGTGCCCAAGTGAAAGAACTTTTTTGGGCTCCTCAATGGTAGAACTTACCTGTGGCT CTGTTAGTTTGCTAGAGAAGCCATATATCCATAGATCCTTACTTGAAGTTGTGAACTGCA AATATTTGTCATATTCAAGTTTATTTGTTTACTTAATTTTTTATTC