Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os12t0123900-01
CDS Infomation

cds chromosome:IRGSP-1.0:12:1151632:1155729:-1 gene:Os12g0123900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os12t0123900-01)
Sequence

ATGGCGGCTGCCTGGGCGGCGGCGGTGGCCGTGATGCTCCTCCTTGCGCAGGTGTCAGCG
GCGGCTCCGGTGATGGGGCCTGCCTTCCTCTGGGCGCCCAATAACTACGGATTCTCTTCT
GATGAGACTAAAGAAATGGTCTACTATCAGACAGTATCCCCAAAGAGCTTAGTGAAATCT
GTTCTTGAGGAAGGTGGTTGGTCAAACTTGGTGTGTTCAAGGGAGGATCATGCAAAGAGT
GTTGATGTTGCAGTTCTTTTTCTTGGCTCGAAGCTACAATCATCAGACATTTCTAAAGAA
AAGCAAGCTGATTCAACTTTAGTAGACATGCTGAAGAACTCCTTTGCAAGCTCCGAGTTT
TCCATGGCATTCCCCTATGTTGCCATGTCAGATGATGACAAATTGGAGAAGTCATTGCTA
TCTGGATTTGCTGAGAATTGCAACAATGGTCTTGGAAATAATCATATCACCTACACAGAC
ACCTGTTCTGTAAGTGAAGATCTGAAGAAACATCACGACATGGATTCCATTCATGGATTG
GTGGCATCACAAACTAAAAAGAACCCAAGTGGACAGACTGATCTGGTTGTCTTCTGTGAT
GGTGGTTTCAAGGATAACACAAAATCAGAAGGGGAGTTACTTTCTGAGCTGGTTACTCTG
CTGAAGAAGTCTGGAGCTAAATATACAATTCTTTATGCTTCTCAGCCCTATGGTTTGCTA
GAGAGCCCTTCAAACCTGCCGTTAGGCAGGTACCTCGCAGAGAAGACTAATACTACTAAA
CCCGGCCGTGGAAAATGTGATGGGGAGTGCTTAGTAAAATCAACTCTGCTAGAAGGAAGC
TTTGTTGGAATAGTGCTGCTAATCATCTTGATATCAGGACTCAAATGTATGATGGGAATT
GATACCCCATCAAAGTTCGATGCTCCCCCGGAATCGTAA

Peptide Sequence

PEP ID

Os12t0123900-01
PEP Infomation

pep chromosome:IRGSP-1.0:12:1151632:1155729:-1 gene:Os12g0123900 transcript:Os12t0123900-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os12t0123900-01)
Sequence

MAAAWAAAVAVMLLLAQVSAAAPVMGPAFLWAPNNYGFSSDETKEMVYYQTVSPKSLVKS
VLEEGGWSNLVCSREDHAKSVDVAVLFLGSKLQSSDISKEKQADSTLVDMLKNSFASSEF
SMAFPYVAMSDDDKLEKSLLSGFAENCNNGLGNNHITYTDTCSVSEDLKKHHDMDSIHGL
VASQTKKNPSGQTDLVVFCDGGFKDNTKSEGELLSELVTLLKKSGAKYTILYASQPYGLL
ESPSNLPLGRYLAEKTNTTKPGRGKCDGECLVKSTLLEGSFVGIVLLIILISGLKCMMGI
DTPSKFDAPPES

Transcript Sequence

Transcript ID

Os12t0123900-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:12:1151632:1155729:-1 gene:Os12g0123900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Conserved hypothetical protein. (Os12t0123900-01)
Sequence

AACCTGCCCCTTGTTCCACAACGACGAACAACATCTCGCCACGAGGAGGAGGGCGAGAGC
TTACACGAGTCCGAAATCCCCAATCCGGGATCCCCTGCTTCTCTTCGCGCCAAGATGGCG
GCTGCCTGGGCGGCGGCGGTGGCCGTGATGCTCCTCCTTGCGCAGGTGTCAGCGGCGGCT
CCGGTGATGGGGCCTGCCTTCCTCTGGGCGCCCAATAACTACGGATTCTCTTCTGATGAG
ACTAAAGAAATGGTCTACTATCAGACAGTATCCCCAAAGAGCTTAGTGAAATCTGTTCTT
GAGGAAGGTGGTTGGTCAAACTTGGTGTGTTCAAGGGAGGATCATGCAAAGAGTGTTGAT
GTTGCAGTTCTTTTTCTTGGCTCGAAGCTACAATCATCAGACATTTCTAAAGAAAAGCAA
GCTGATTCAACTTTAGTAGACATGCTGAAGAACTCCTTTGCAAGCTCCGAGTTTTCCATG
GCATTCCCCTATGTTGCCATGTCAGATGATGACAAATTGGAGAAGTCATTGCTATCTGGA
TTTGCTGAGAATTGCAACAATGGTCTTGGAAATAATCATATCACCTACACAGACACCTGT
TCTGTAAGTGAAGATCTGAAGAAACATCACGACATGGATTCCATTCATGGATTGGTGGCA
TCACAAACTAAAAAGAACCCAAGTGGACAGACTGATCTGGTTGTCTTCTGTGATGGTGGT
TTCAAGGATAACACAAAATCAGAAGGGGAGTTACTTTCTGAGCTGGTTACTCTGCTGAAG
AAGTCTGGAGCTAAATATACAATTCTTTATGCTTCTCAGCCCTATGGTTTGCTAGAGAGC
CCTTCAAACCTGCCGTTAGGCAGGTACCTCGCAGAGAAGACTAATACTACTAAACCCGGC
CGTGGAAAATGTGATGGGGAGTGCTTAGTAAAATCAACTCTGCTAGAAGGAAGCTTTGTT
GGAATAGTGCTGCTAATCATCTTGATATCAGGACTCAAATGTATGATGGGAATTGATACC
CCATCAAAGTTCGATGCTCCCCCGGAATCGTAAGCCCATTTTTAAGCAGATCTGAATGGA
AACTCAAGGCAAACACGAGGGGAAAATTGAATAGCTGATGTAGCAGGTCTGTACTGTGAA
TATAGTTAGTTTGCTACTTATTGCCTTATGTATTTTAATGAGCCAACTGCAATTTGCAGT
CAATTTTTGGTGGAATATTACATTTCAAAACGTACACGTGCAAGGCCTGATTTGTACCAT
ATAACACTGCCTCTAGTGTTTGCTGTGTGAATAAGCTGGAATTAAAACCTGTTTTGGAAT
AAGATGTCACAGTTCATCGAATAAAACCTTGCGATATATTTCATTATTTTC