Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os12t0122100-01
CDS Infomation

cds chromosome:IRGSP-1.0:12:1052828:1053873:1 gene:Os12g0122100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF607 family protein. (Os12t0122100-01)
Sequence

ATGTGGCGCGCGGCCGCCTCCCACCTCCTCCGCCGCCGCGCCGCGCATCCTCCTCCCTCT
CCGGCAACCGCCACAGGGGCGGCCTGCGCGCTCCGCCACGTGCGCCTCTTCTCCCCGCCT
CCGCATCCGCCGTCGTCGCGGCCCGCGGAGGCCGAGGCGGAGGTGACGGCGGCGGAGGCG
CGGAGGCTGGTGCGGCTGGTGGGCGTGGAGGCGCTCAAGCGGCGGCTGAGGGACGGGCGG
GAGGAGGTGGTCGGGTACGGGGAGCTCCTGGACGCCTGCGTCGAGGCCGGCGCGGCGCGC
ACGCGGCGTGACGCGGAGGCGCTCGCCCGGGCCATGGATGAGGCCGGCGTCGTGCTGCTG
TTCCGCGACAAGGCCTACCTCCACCCCGAGAAGGTGGTTGAGCTTGTTAGAAGAGCTGTT
CCGCTTGCACTCTCACCGGAGAACGATTCAAGAAAAGAAGAGCTGAAGAAGCTCCAGGAG
AAGAAGGAAGAGATCGACAAGCTGGCACACAAGCAAGTTCGGCGCATCCTGTGGTCTGGA
CTAGGTTTCTTCATGTGCCAAGTTGGGCTCTTCTTCCGCCTTACTTTCTGGGAATTTTCA
TGGGATGTGATGGAGCCAATTGCCTTCTTCACAACTGCATCTGGCCTACTCGTTGGTTAC
GCATATTTCCTCATTACCTCAAGGGATCCAACATATGAGGACTTCATGGAAAGGCTGTAT
TTGTCAAGACACAGAAAGCTTTGTGCCAAGAATAGTTTTGATATGGAAAAGTACCTTGAG
TTGCAGAAGCATTGCAAGTGTCCTCTGGAAGGTCATTATCCCCATGGTCCTAAGTTTCAT
GACTTGTAA

Peptide Sequence

PEP ID

Os12t0122100-01
PEP Infomation

pep chromosome:IRGSP-1.0:12:1052828:1053873:1 gene:Os12g0122100 transcript:Os12t0122100-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF607 family protein. (Os12t0122100-01)
Sequence

MWRAAASHLLRRRAAHPPPSPATATGAACALRHVRLFSPPPHPPSSRPAEAEAEVTAAEA
RRLVRLVGVEALKRRLRDGREEVVGYGELLDACVEAGAARTRRDAEALARAMDEAGVVLL
FRDKAYLHPEKVVELVRRAVPLALSPENDSRKEELKKLQEKKEEIDKLAHKQVRRILWSG
LGFFMCQVGLFFRLTFWEFSWDVMEPIAFFTTASGLLVGYAYFLITSRDPTYEDFMERLY
LSRHRKLCAKNSFDMEKYLELQKHCKCPLEGHYPHGPKFHDL

Transcript Sequence

Transcript ID

Os12t0122100-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:12:1052828:1053873:1 gene:Os12g0122100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF607 family protein. (Os12t0122100-01)
Sequence

GGCCGGCCTCATTCGGCAACCAACCATGTGGCGCGCGGCCGCCTCCCACCTCCTCCGCCG
CCGCGCCGCGCATCCTCCTCCCTCTCCGGCAACCGCCACAGGGGCGGCCTGCGCGCTCCG
CCACGTGCGCCTCTTCTCCCCGCCTCCGCATCCGCCGTCGTCGCGGCCCGCGGAGGCCGA
GGCGGAGGTGACGGCGGCGGAGGCGCGGAGGCTGGTGCGGCTGGTGGGCGTGGAGGCGCT
CAAGCGGCGGCTGAGGGACGGGCGGGAGGAGGTGGTCGGGTACGGGGAGCTCCTGGACGC
CTGCGTCGAGGCCGGCGCGGCGCGCACGCGGCGTGACGCGGAGGCGCTCGCCCGGGCCAT
GGATGAGGCCGGCGTCGTGCTGCTGTTCCGCGACAAGGCCTACCTCCACCCCGAGAAGGT
GGTTGAGCTTGTTAGAAGAGCTGTTCCGCTTGCACTCTCACCGGAGAACGATTCAAGAAA
AGAAGAGCTGAAGAAGCTCCAGGAGAAGAAGGAAGAGATCGACAAGCTGGCACACAAGCA
AGTTCGGCGCATCCTGTGGTCTGGACTAGGTTTCTTCATGTGCCAAGTTGGGCTCTTCTT
CCGCCTTACTTTCTGGGAATTTTCATGGGATGTGATGGAGCCAATTGCCTTCTTCACAAC
TGCATCTGGCCTACTCGTTGGTTACGCATATTTCCTCATTACCTCAAGGGATCCAACATA
TGAGGACTTCATGGAAAGGCTGTATTTGTCAAGACACAGAAAGCTTTGTGCCAAGAATAG
TTTTGATATGGAAAAGTACCTTGAGTTGCAGAAGCATTGCAAGTGTCCTCTGGAAGGTCA
TTATCCCCATGGTCCTAAGTTTCATGACTTGTAACACCTGGATTGGATTTTCTCTACTGT
TGTTACTTGATAATGTACTCTTTACTTGTAGAATCGATAG