Plant GARDEN How To ▶︎

JA

EN

Oryza sativa

CDS Sequence

CDS ID

Os12t0122000-01

CDS Infomation

cds chromosome:IRGSP-1.0:12:1043608:1047116:1 gene:Os12g0122000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SCARECROW GENE description:SCARECROW. (Os12t0122000-01)

Sequence

ATGGGCTCCTCCTCCCTCCTCCTCTTCCCCTCCTCTTCCTCCTCCGCCACCCACTCCTCT
TATTCTCCCTCCTCCTCCTCTCATGCCATCACCTCCTTGCTGCCTCCTCTCCCCTCCGAC
CACCATCTCCTCCTCTACCTAGACCACCAAGAACAACACCACCTCGCCGCCGCCATGGTC
CGCAAGCGCCCCGCCTCCGACATGGACCTGCCACCGCCGCGCCGCCATGTCACCGGCGAC
CTGTCCGATGTCACGGCCGCCGCGGCGGGCGCGCCGACGTTGTCTGCCAGCGCGCAGCTC
CCCGCGCTGCCCACGCAGCTCCCGGCGTTCCACCACACGGACATGGACCTCGCCGCGCCC
GCGCCGCCGGCGCCGCAGCAGGTGGCGGCGGGTGAGGGTGGGCCGCCCAGCACGGCTTGG
GTGGATGGCATCATCCGTGACATCATCGCCAGCAGCGGCGCCGCGGTCTCCGTCGCGCAG
CTCATCCACAACGTGCGTGAGATCATCCGGCCATGTAACCCCGACCTCGCGTCCATCCTC
GAGCTCCGCCTCCGCTCTCTCCTCAACTCCGACCCCGCGCCGCCGCCGCCGCCGCCGTCG
CATCCTGCTCTCCTCCCTCCCGACGCCACGGCGCCACCGCCACCACCCACGTCGGTCGCC
GCGCTCCCTCCCCCTCCGCCAGCGCAGCCCGACAAGCGGCGTCGCGAGCCTCAGTGTCAG
GAGCAGGAGCCCAACCAGCCGCAGTCGCCGAAGCCCCCCACCGCGGAGGAAACCGCCGCC
GCCGCCGCGGCCGCCGCAGCGGCGGCTGCCGCGGCCGCCAAGGAGCGTAAGGAGGAGCAG
CGGCGGAAGCAGCGCGACGAGGAGGGCCTCCACTTGCTGACGCTGCTGCTCCAGTGCGCG
GAGTCGGTGAACGCGGACAACCTGGACGAGGCGCACCGCGCGCTGCTGGAGATCGCGGAG
CTCGCCACGCCGTTCGGCACCTCGACGCAGCGCGTGGCGGCCTACTTCGCGGAGGCCATG
TCGGCGCGGCTGGTGAGCTCGTGCCTGGGGCTGTACGCGCCGCTCCCGAGCCCGTCCCCG
GCGGGCGCGCGGGTCCACGGGCGCGTGGCGGCGGCGTTCCAGGTGTTCAACGGGATCAGC
CCGTTCGTGAAGTTCTCGCACTTCACGGCGAACCAGGCGATCCAGGAGGCGTTCGAGAGG
GAGGAGAGGGTGCACATCATCGACCTGGACATCATGCAGGGGCTCCAATGGCCGGGGCTG
TTCCACATCCTGGCGTCGCGGCCGGGGGGGCCGCCGAGGGTGAGGCTGACCGGGCTGGGG
GCGTCCATGGAGGCGCTGGAGGCGACGGGGAAGAGGCTGTCGGACTTCGCGGACACGCTG
GGATTGCCGTTCGAGTTCTGCCCGGTGGCTGACAAGGCCGGGAATCTGGACCCGGAGAAG
CTGGGCGTCACGCGCCGCGAGGCCGTCGCCGTCCACTGGCTGCGCCACTCCCTCTACGAT
GTCACCGGCTCCGACTCCAACACGCTCTGGCTCATCCAGAGGTTGGCGCCAAAGGTTGTA
ACAATGGTGGAGCAGGATCTGAGCCACTCAGGCTCCTTCCTGGCACGTTTTGTGGAGGCC
ATCCACTACTATTCGGCACTGTTCGACTCGCTTGATGCGAGTTACAGCGAGGATAGCCCG
GAGCGGCATGTCGTGGAGCAACAACTCTTGTCGCGGGAGATCCGCAATGTGCTAGCCGTG
GGCGGTCCAGCACGCACCGGCGATGTTAAGTTTGGGAGCTGGCGCGAAAAGCTTGCGCAG
TCGGGCTTCCGTGTGTCGTCGCTTGCTGGAAGCGCTGCTGCTCAGGCTGCACTGCTGCTT
GGGATGTTCCCTTCCGATGGATACACGCTTATTGAGGAGAATGGCGCTCTGAAGCTCGGA
TGGAAGGATCTGTGCCTTCTCACTGCCTCTGCTTGGCGCCCAATTCAGGCTTCGGGACGT
TAG

Peptide Sequence

PEP ID

Os12t0122000-01

PEP Infomation

pep chromosome:IRGSP-1.0:12:1043608:1047116:1 gene:Os12g0122000 transcript:Os12t0122000-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SCARECROW GENE description:SCARECROW. (Os12t0122000-01)

Sequence

MGSSSLLLFPSSSSSATHSSYSPSSSSHAITSLLPPLPSDHHLLLYLDHQEQHHLAAAMV
RKRPASDMDLPPPRRHVTGDLSDVTAAAAGAPTLSASAQLPALPTQLPAFHHTDMDLAAP
APPAPQQVAAGEGGPPSTAWVDGIIRDIIASSGAAVSVAQLIHNVREIIRPCNPDLASIL
ELRLRSLLNSDPAPPPPPPSHPALLPPDATAPPPPPTSVAALPPPPPAQPDKRRREPQCQ
EQEPNQPQSPKPPTAEETAAAAAAAAAAAAAAAKERKEEQRRKQRDEEGLHLLTLLLQCA
ESVNADNLDEAHRALLEIAELATPFGTSTQRVAAYFAEAMSARLVSSCLGLYAPLPSPSP
AGARVHGRVAAAFQVFNGISPFVKFSHFTANQAIQEAFEREERVHIIDLDIMQGLQWPGL
FHILASRPGGPPRVRLTGLGASMEALEATGKRLSDFADTLGLPFEFCPVADKAGNLDPEK
LGVTRREAVAVHWLRHSLYDVTGSDSNTLWLIQRLAPKVVTMVEQDLSHSGSFLARFVEA
IHYYSALFDSLDASYSEDSPERHVVEQQLLSREIRNVLAVGGPARTGDVKFGSWREKLAQ
SGFRVSSLAGSAAAQAALLLGMFPSDGYTLIEENGALKLGWKDLCLLTASAWRPIQASGR

Transcript Sequence

Transcript ID

Os12t0122000-01

Transcript Infomation

cdna chromosome:IRGSP-1.0:12:1043608:1047116:1 gene:Os12g0122000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:SCARECROW GENE description:SCARECROW. (Os12t0122000-01)

Sequence

GCGCCGCGCCAAATTCCATAAAAATTCCACCCAACACAAGCGTTAGGCCTCCCGCGCACG
CCCGTCCGCTCGCCATGCCCACGGCCTCTTCCCCTTGGCGTTTGTAGATGGGCTCCTCCT
CCCTCCTCCTCTTCCCCTCCTCTTCCTCCTCCGCCACCCACTCCTCTTATTCTCCCTCCT
CCTCCTCTCATGCCATCACCTCCTTGCTGCCTCCTCTCCCCTCCGACCACCATCTCCTCC
TCTACCTAGACCACCAAGAACAACACCACCTCGCCGCCGCCATGGTCCGCAAGCGCCCCG
CCTCCGACATGGACCTGCCACCGCCGCGCCGCCATGTCACCGGCGACCTGTCCGATGTCA
CGGCCGCCGCGGCGGGCGCGCCGACGTTGTCTGCCAGCGCGCAGCTCCCCGCGCTGCCCA
CGCAGCTCCCGGCGTTCCACCACACGGACATGGACCTCGCCGCGCCCGCGCCGCCGGCGC
CGCAGCAGGTGGCGGCGGGTGAGGGTGGGCCGCCCAGCACGGCTTGGGTGGATGGCATCA
TCCGTGACATCATCGCCAGCAGCGGCGCCGCGGTCTCCGTCGCGCAGCTCATCCACAACG
TGCGTGAGATCATCCGGCCATGTAACCCCGACCTCGCGTCCATCCTCGAGCTCCGCCTCC
GCTCTCTCCTCAACTCCGACCCCGCGCCGCCGCCGCCGCCGCCGTCGCATCCTGCTCTCC
TCCCTCCCGACGCCACGGCGCCACCGCCACCACCCACGTCGGTCGCCGCGCTCCCTCCCC
CTCCGCCAGCGCAGCCCGACAAGCGGCGTCGCGAGCCTCAGTGTCAGGAGCAGGAGCCCA
ACCAGCCGCAGTCGCCGAAGCCCCCCACCGCGGAGGAAACCGCCGCCGCCGCCGCGGCCG
CCGCAGCGGCGGCTGCCGCGGCCGCCAAGGAGCGTAAGGAGGAGCAGCGGCGGAAGCAGC
GCGACGAGGAGGGCCTCCACTTGCTGACGCTGCTGCTCCAGTGCGCGGAGTCGGTGAACG
CGGACAACCTGGACGAGGCGCACCGCGCGCTGCTGGAGATCGCGGAGCTCGCCACGCCGT
TCGGCACCTCGACGCAGCGCGTGGCGGCCTACTTCGCGGAGGCCATGTCGGCGCGGCTGG
TGAGCTCGTGCCTGGGGCTGTACGCGCCGCTCCCGAGCCCGTCCCCGGCGGGCGCGCGGG
TCCACGGGCGCGTGGCGGCGGCGTTCCAGGTGTTCAACGGGATCAGCCCGTTCGTGAAGT
TCTCGCACTTCACGGCGAACCAGGCGATCCAGGAGGCGTTCGAGAGGGAGGAGAGGGTGC
ACATCATCGACCTGGACATCATGCAGGGGCTCCAATGGCCGGGGCTGTTCCACATCCTGG
CGTCGCGGCCGGGGGGGCCGCCGAGGGTGAGGCTGACCGGGCTGGGGGCGTCCATGGAGG
CGCTGGAGGCGACGGGGAAGAGGCTGTCGGACTTCGCGGACACGCTGGGATTGCCGTTCG
AGTTCTGCCCGGTGGCTGACAAGGCCGGGAATCTGGACCCGGAGAAGCTGGGCGTCACGC
GCCGCGAGGCCGTCGCCGTCCACTGGCTGCGCCACTCCCTCTACGATGTCACCGGCTCCG
ACTCCAACACGCTCTGGCTCATCCAGAGGTTGGCGCCAAAGGTTGTAACAATGGTGGAGC
AGGATCTGAGCCACTCAGGCTCCTTCCTGGCACGTTTTGTGGAGGCCATCCACTACTATT
CGGCACTGTTCGACTCGCTTGATGCGAGTTACAGCGAGGATAGCCCGGAGCGGCATGTCG
TGGAGCAACAACTCTTGTCGCGGGAGATCCGCAATGTGCTAGCCGTGGGCGGTCCAGCAC
GCACCGGCGATGTTAAGTTTGGGAGCTGGCGCGAAAAGCTTGCGCAGTCGGGCTTCCGTG
TGTCGTCGCTTGCTGGAAGCGCTGCTGCTCAGGCTGCACTGCTGCTTGGGATGTTCCCTT
CCGATGGATACACGCTTATTGAGGAGAATGGCGCTCTGAAGCTCGGATGGAAGGATCTGT
GCCTTCTCACTGCCTCTGCTTGGCGCCCAATTCAGGCTTCGGGACGTTAGTATTGAGGGG
GAATTTATAGAGCTGAAGTATCACTTGATCTTACTTAGGTGCAATTACCTAGTCCTTTTG
CTTCTTTTAGCTGCTCAATTTGGTCAATTCTGAGAAAAGAAAAATAAAAAAAAATTCTGA
TCACTAATTTTCAGATCTCCACACAGTGGTAGTTACTAATGTGCAACTTAGCTTTAGCTT
TTATTCTGTTCATGCTCCAGTTAACCATTCTGTCCAATTTAGTTTATTTTGCAATTTTGT
AGTGCTTAATCCTTGCTGACATTGTTTTGGGGGAACACGCAAAAGGATCCTTACTGA