Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os12t0121600-01
CDS Infomation	cds chromosome:IRGSP-1.0:12:1018201:1021176:1 gene:Os12g0121600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Cation/H+ exchanger domain containing protein. (Os12t0121600-01)
Sequence	ATGGCAGCGCATACAGTGACGGACCCACTGGAGGAGCTATGGAACCACACGATGTCGATG GACAAGACGCACCTGATGTGCTTCTACCCGAGCAAGATCACCATGGGTGGCGTCTGGACG GGCGACAATCCGCTCGACTTCTCCATACCTCTCCTCCTCTTCCAGATCCTCCTCATCACC TCCACCACCCGCGCCGCCACCCTCCTCCTCTCTCCTCTCCGTCTCCCCACCTACATCTCC CAGATCCTCGCCGGCTTCCTCCTTGGCCCCTCCGTCCTTGGCCACCTCCCTCACTTCTCC AACCTCGTCTTCCCCGTCCGTAGCCTCTTCGTCCTTGAGTCCATGGCCCTTCTCGGCCTC GTCTACTACACCTTCATCGTCGGCGTCGAGATCGAGGTCTCCGCCATCACCCGCGCCGGC ATCCGTAGCTTCGGCTTCGCCATTGGCTGCACGCTCCCGCCCTTCCTCGTCGGCGCTCTC ACCGGCTACGTCGCGCTCAGCACTGACGACAAACACAAGGGTGACACGTTCCTCAACAAG CTCTCCTTCCCCATCTTCCTCGGCTCCACCTTCTCCTCCACCGCCTTCGCCGTCCTCGCC CGCAACATCGCCGAGCTGAAGCTTGCCGGCACCGACGTCGGCCAGCTCACGCTCTCTGCG TCACTCATCAACGACACCTTCGCCTGGACCGGCCTCACCGTCGCCACGGTGCTCGGCCAC TCGCGCTGCACCATCACGCAGACCACGTGGACGCTCACGTCGGGCGTCGTCATCTTCGGC GCCAGCTACCTCCTGCTCCGCCCCATGCTCCTGCGGCTGGCGAGGCGCGCCGCCGAGGGG GAGGCGGTCGGCGAGGACCGCGAGTGCTGGATTCTGATCGGCGTCATGGTGGCGGCGCTG GTGGCGGACGCGGGGGGCACGCACGCCATATTCGGCGCCTTCGTGTTCGGGCTCGCGGTG CCCAACGGGCCGGTCGGGGTGGCGCTGGTGGAGAAGGTGGAGGACTTCGTGGTGGGCGCT CTGCTCCCGCTCTTCTTCGCCCTCAGCGGCCTCCGCACCGACACCGCCAAGATCACCAAC ATGCATTCTGCCGTGTTGCTCATGGTCGCTGCCATGGTCGCTGCGGTCTTGAAGGTCGTC GCCGCAATCGGCGTCGCCGGTGTGTTCGGCATGCCGCTCGGTGACGGCACGTCCATCGGG CTGTTGCTCAACACCAAGGGGATCATCGAGCTCGTCATCCTCAACATTGCAAGGAACAAA GGGATTATGAGTGACCAGTCGTTCACGGTGCTGGTGTTCGTGTCAGCGCTGATCACGGCG ATGGTGAGCCCTTTCCTGGGCATGGTGGTGAAGCCGGCGCGGCGGCTCGTGTTCTACAAG CGGCGCACGGTGGCGTGGGCTCACCCGGAATCGGAGCTCCGCGTGCTGGCCTGCGTCCAC GTGCCGCGCGACGTGCCCGCGCTACTGACGCTCCTCGACGTGGTGACGCCGTCGAGCCGA TCGCCCGTGGGCGTCCTCGCCCTCCACCTCATCGAGTTCGTGGGCCGCTCCTCCGCGCTC CTCCTCATCAACGCCTCGGCGCCATCGTCGTCCTCCTACGACGCCTCCGTCCACGGGCGC AGCCACACGGAGATGCAGTTCAAGCACATCTCCCACGCCTTCATGGCGTACGAGGAGCAG TCGGTGGGCGTGTCGGCGCGCACCATGGCCGCCGTCTCGCCGTACGCCTCCATGCACGAG GACATCACCTCCGCCGCGGAGAACCAGCACTCGGCGCTCATCCTGCTCCCGTTCCACAAG TACCGGTCGGTGGACGGCGGCCTGGAGGTGTCCCACCCGGCGATACAGCCGCTCAACTGC AGCGTGCAGAGCTTCTCGCCGTGCACGGTGGGCATCCTCGTGGACCGTGGCCTCGCGGCG GTGCCGGGTGGCGGGTACCGCGTGGTGGCTCTCTTCTTCGGCGGGAGCGACGACCGGGAG GTGGCGGCGCTGGCGACGCGGATGGTGAGGAACCCGACCATCGACCTGACATTGCTCCGG TTCGTCCAGAAGGGAGGAAGCTTCACGGCGAGCGAGTTCGACGCGCTGAAAGAGCGGAAG GCCGACGAGGGGTGCCTGCGCGACTTCCTGGAGAGGGCGAACGAGGGCGGCGGCGCGACG GTGGAGTACAGGGAGCGCGGCGTGTTCAACGCGAGCGAGATGGTGGGGGAGATACAGAGC GTGGAGGCCATGGGGAACAAGGACCTGTTCGTCGTCGGGAAGGTGCCCGGGGGGTCAGGG CTGACGGCGGGCATGGCGGAGTGGAGCGAGTCACCGGAGCTGGGGCCCATCGGCGACCTG CTGGCGTCCAAGGACTTCCAGACGACGGCGTCGGTGCTGGTGCTGCAGGCGTACGGGAGG CCGGCGGCAGTGGTGGGAGCGGGAGCGGGAGCAATGTCGGTGGATTTTGGCGGCGACAGC GTGGCGATGGCGGAGAGGACAGCCAGTGGGCGTAGGCCATGGGCACGACCGGGTGTATGA

Peptide Sequence

PEP ID	Os12t0121600-01
PEP Infomation	pep chromosome:IRGSP-1.0:12:1018201:1021176:1 gene:Os12g0121600 transcript:Os12t0121600-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Cation/H+ exchanger domain containing protein. (Os12t0121600-01)
Sequence	MAAHTVTDPLEELWNHTMSMDKTHLMCFYPSKITMGGVWTGDNPLDFSIPLLLFQILLIT STTRAATLLLSPLRLPTYISQILAGFLLGPSVLGHLPHFSNLVFPVRSLFVLESMALLGL VYYTFIVGVEIEVSAITRAGIRSFGFAIGCTLPPFLVGALTGYVALSTDDKHKGDTFLNK LSFPIFLGSTFSSTAFAVLARNIAELKLAGTDVGQLTLSASLINDTFAWTGLTVATVLGH SRCTITQTTWTLTSGVVIFGASYLLLRPMLLRLARRAAEGEAVGEDRECWILIGVMVAAL VADAGGTHAIFGAFVFGLAVPNGPVGVALVEKVEDFVVGALLPLFFALSGLRTDTAKITN MHSAVLLMVAAMVAAVLKVVAAIGVAGVFGMPLGDGTSIGLLLNTKGIIELVILNIARNK GIMSDQSFTVLVFVSALITAMVSPFLGMVVKPARRLVFYKRRTVAWAHPESELRVLACVH VPRDVPALLTLLDVVTPSSRSPVGVLALHLIEFVGRSSALLLINASAPSSSSYDASVHGR SHTEMQFKHISHAFMAYEEQSVGVSARTMAAVSPYASMHEDITSAAENQHSALILLPFHK YRSVDGGLEVSHPAIQPLNCSVQSFSPCTVGILVDRGLAAVPGGGYRVVALFFGGSDDRE VAALATRMVRNPTIDLTLLRFVQKGGSFTASEFDALKERKADEGCLRDFLERANEGGGAT VEYRERGVFNASEMVGEIQSVEAMGNKDLFVVGKVPGGSGLTAGMAEWSESPELGPIGDL LASKDFQTTASVLVLQAYGRPAAVVGAGAGAMSVDFGGDSVAMAERTASGRRPWARPGV

Transcript Sequence

Transcript ID	Os12t0121600-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:12:1018201:1021176:1 gene:Os12g0121600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Cation/H+ exchanger domain containing protein. (Os12t0121600-01)
Sequence	ACTCCTCCTCCCCTCACCTCACCTTACCTAAGAACGCCACCCATTGCCGGAGTTGATACC AAACAAGGAATTCATCAATGGCAGCGCATACAGTGACGGACCCACTGGAGGAGCTATGGA ACCACACGATGTCGATGGACAAGACGCACCTGATGTGCTTCTACCCGAGCAAGATCACCA TGGGTGGCGTCTGGACGGGCGACAATCCGCTCGACTTCTCCATACCTCTCCTCCTCTTCC AGATCCTCCTCATCACCTCCACCACCCGCGCCGCCACCCTCCTCCTCTCTCCTCTCCGTC TCCCCACCTACATCTCCCAGATCCTCGCCGGCTTCCTCCTTGGCCCCTCCGTCCTTGGCC ACCTCCCTCACTTCTCCAACCTCGTCTTCCCCGTCCGTAGCCTCTTCGTCCTTGAGTCCA TGGCCCTTCTCGGCCTCGTCTACTACACCTTCATCGTCGGCGTCGAGATCGAGGTCTCCG CCATCACCCGCGCCGGCATCCGTAGCTTCGGCTTCGCCATTGGCTGCACGCTCCCGCCCT TCCTCGTCGGCGCTCTCACCGGCTACGTCGCGCTCAGCACTGACGACAAACACAAGGGTG ACACGTTCCTCAACAAGCTCTCCTTCCCCATCTTCCTCGGCTCCACCTTCTCCTCCACCG CCTTCGCCGTCCTCGCCCGCAACATCGCCGAGCTGAAGCTTGCCGGCACCGACGTCGGCC AGCTCACGCTCTCTGCGTCACTCATCAACGACACCTTCGCCTGGACCGGCCTCACCGTCG CCACGGTGCTCGGCCACTCGCGCTGCACCATCACGCAGACCACGTGGACGCTCACGTCGG GCGTCGTCATCTTCGGCGCCAGCTACCTCCTGCTCCGCCCCATGCTCCTGCGGCTGGCGA GGCGCGCCGCCGAGGGGGAGGCGGTCGGCGAGGACCGCGAGTGCTGGATTCTGATCGGCG TCATGGTGGCGGCGCTGGTGGCGGACGCGGGGGGCACGCACGCCATATTCGGCGCCTTCG TGTTCGGGCTCGCGGTGCCCAACGGGCCGGTCGGGGTGGCGCTGGTGGAGAAGGTGGAGG ACTTCGTGGTGGGCGCTCTGCTCCCGCTCTTCTTCGCCCTCAGCGGCCTCCGCACCGACA CCGCCAAGATCACCAACATGCATTCTGCCGTGTTGCTCATGGTCGCTGCCATGGTCGCTG CGGTCTTGAAGGTCGTCGCCGCAATCGGCGTCGCCGGTGTGTTCGGCATGCCGCTCGGTG ACGGCACGTCCATCGGGCTGTTGCTCAACACCAAGGGGATCATCGAGCTCGTCATCCTCA ACATTGCAAGGAACAAAGGGATTATGAGTGACCAGTCGTTCACGGTGCTGGTGTTCGTGT CAGCGCTGATCACGGCGATGGTGAGCCCTTTCCTGGGCATGGTGGTGAAGCCGGCGCGGC GGCTCGTGTTCTACAAGCGGCGCACGGTGGCGTGGGCTCACCCGGAATCGGAGCTCCGCG TGCTGGCCTGCGTCCACGTGCCGCGCGACGTGCCCGCGCTACTGACGCTCCTCGACGTGG TGACGCCGTCGAGCCGATCGCCCGTGGGCGTCCTCGCCCTCCACCTCATCGAGTTCGTGG GCCGCTCCTCCGCGCTCCTCCTCATCAACGCCTCGGCGCCATCGTCGTCCTCCTACGACG CCTCCGTCCACGGGCGCAGCCACACGGAGATGCAGTTCAAGCACATCTCCCACGCCTTCA TGGCGTACGAGGAGCAGTCGGTGGGCGTGTCGGCGCGCACCATGGCCGCCGTCTCGCCGT ACGCCTCCATGCACGAGGACATCACCTCCGCCGCGGAGAACCAGCACTCGGCGCTCATCC TGCTCCCGTTCCACAAGTACCGGTCGGTGGACGGCGGCCTGGAGGTGTCCCACCCGGCGA TACAGCCGCTCAACTGCAGCGTGCAGAGCTTCTCGCCGTGCACGGTGGGCATCCTCGTGG ACCGTGGCCTCGCGGCGGTGCCGGGTGGCGGGTACCGCGTGGTGGCTCTCTTCTTCGGCG GGAGCGACGACCGGGAGGTGGCGGCGCTGGCGACGCGGATGGTGAGGAACCCGACCATCG ACCTGACATTGCTCCGGTTCGTCCAGAAGGGAGGAAGCTTCACGGCGAGCGAGTTCGACG CGCTGAAAGAGCGGAAGGCCGACGAGGGGTGCCTGCGCGACTTCCTGGAGAGGGCGAACG AGGGCGGCGGCGCGACGGTGGAGTACAGGGAGCGCGGCGTGTTCAACGCGAGCGAGATGG TGGGGGAGATACAGAGCGTGGAGGCCATGGGGAACAAGGACCTGTTCGTCGTCGGGAAGG TGCCCGGGGGGTCAGGGCTGACGGCGGGCATGGCGGAGTGGAGCGAGTCACCGGAGCTGG GGCCCATCGGCGACCTGCTGGCGTCCAAGGACTTCCAGACGACGGCGTCGGTGCTGGTGC TGCAGGCGTACGGGAGGCCGGCGGCAGTGGTGGGAGCGGGAGCGGGAGCAATGTCGGTGG ATTTTGGCGGCGACAGCGTGGCGATGGCGGAGAGGACAGCCAGTGGGCGTAGGCCATGGG CACGACCGGGTGTATGATCATCGATCATCGGAGAATTTTTCTTTCTAGAATTGGTGACCG TTGAGATAGATGTAGGAATAGCTGATAATATGGTGTGGATAATTGCATATTATGGTATAA AATTTATACATAGTGCAAAGCTTAAACATAGTTCTTGGAAAAATAAAGCTAAATAACCAT ACACTAGCATGTTGTTAATCAAGCAGTCATCGTTGTGATGCAACATTTTGTTATTTAGAG GGCCTGAGGATGAGAACAAATGCAGGGAGGTTTGGAAATATCAGAAGAAACTCAGGAGCA GTTTCATTTTC