Plant GARDEN
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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os12t0120500-01
CDS Infomation

cds chromosome:IRGSP-1.0:12:975104:977096:-1 gene:Os12g0120500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF567 family protein. (Os12t0120500-01)
Sequence

ATGAGTCGGATACACCCTTCGTATCAACGCCAAGATGCCGCCGCCGCCGCCGCCTCAACG
GCAGCGCCGCGAGCGGCGGTGTACACGGTGTGGAAGAGGTCCAGCATGGGGTTCCAGGGC
ACCGACGGCTTCTCCGTCTACGACGACGCCGGCAGCCTCGCCTTCCGTGTTGACAACTAC
TCGCGCCGCCGCAAGCTCTTCTCCGGCGACCTGCTGCTCATGGATGGACATGGCTCGCCT
CTCCTCGCCCTCACCCCACAGATTATCAGCATGCATGACCAATGGAATTGTTACAGAGCG
TCAGAAGAAGGCCAAGGCAAGAGGGCAAGATCACAACAACTCTTCTCAATGAGAAAATGC
TCAGTTATGCAAAGCAGTCATGAAGCAGAAGTGCACATGTCAGGATGTACCCATGCGTCG
TCAGATCGTACTGGCCATGTTCCCGCCTTCTCAATCGAGGGCAGTTTCAAGAGAAGAAGC
TGCAAGATCCGCAACAGCGGCGGTGAGGAGGTCGCAAGGATAACGAGGAAGAAAGCTGGA
GCAGCATCATTGTCACTGACTCTTGCTGAAGATGTTTTCAGTCTTGAGGTCCAACCGAAT
GTAGATTGTGCGATGATCATGGCTTTCGTCATTGTTCTGGATCGGATCTGCTGGAAGCCA
TACACACCTATGATCTGTTCTTCATAG

Peptide Sequence

PEP ID

Os12t0120500-01
PEP Infomation

pep chromosome:IRGSP-1.0:12:975104:977096:-1 gene:Os12g0120500 transcript:Os12t0120500-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF567 family protein. (Os12t0120500-01)
Sequence

MSRIHPSYQRQDAAAAAASTAAPRAAVYTVWKRSSMGFQGTDGFSVYDDAGSLAFRVDNY
SRRRKLFSGDLLLMDGHGSPLLALTPQIISMHDQWNCYRASEEGQGKRARSQQLFSMRKC
SVMQSSHEAEVHMSGCTHASSDRTGHVPAFSIEGSFKRRSCKIRNSGGEEVARITRKKAG
AASLSLTLAEDVFSLEVQPNVDCAMIMAFVIVLDRICWKPYTPMICSS

Transcript Sequence

Transcript ID

Os12t0120500-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:12:975104:977096:-1 gene:Os12g0120500 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF567 family protein. (Os12t0120500-01)
Sequence

GGTCAGCACTGACGAGTCGAGCACTACATCTCTCGTCCAACGCCAAACTCTCTCTCTCTC
TCTCTCTCTCTCTCTGCAGATAGATAGGTAGATCCGATCGCGGCGAGGAAGATCGATGAG
TCGGATACACCCTTCGTATCAACGCCAAGATGCCGCCGCCGCCGCCGCCTCAACGGCAGC
GCCGCGAGCGGCGGTGTACACGGTGTGGAAGAGGTCCAGCATGGGGTTCCAGGGCACCGA
CGGCTTCTCCGTCTACGACGACGCCGGCAGCCTCGCCTTCCGTGTTGACAACTACTCGCG
CCGCCGCAAGCTCTTCTCCGGCGACCTGCTGCTCATGGATGGACATGGCTCGCCTCTCCT
CGCCCTCACCCCACAGATTATCAGCATGCATGACCAATGGAATTGTTACAGAGCGTCAGA
AGAAGGCCAAGGCAAGAGGGCAAGATCACAACAACTCTTCTCAATGAGAAAATGCTCAGT
TATGCAAAGCAGTCATGAAGCAGAAGTGCACATGTCAGGATGTACCCATGCGTCGTCAGA
TCGTACTGGCCATGTTCCCGCCTTCTCAATCGAGGGCAGTTTCAAGAGAAGAAGCTGCAA
GATCCGCAACAGCGGCGGTGAGGAGGTCGCAAGGATAACGAGGAAGAAAGCTGGAGCAGC
ATCATTGTCACTGACTCTTGCTGAAGATGTTTTCAGTCTTGAGGTCCAACCGAATGTAGA
TTGTGCGATGATCATGGCTTTCGTCATTGTTCTGGATCGGATCTGCTGGAAGCCATACAC
ACCTATGATCTGTTCTTCATAGTTCAAGGTGATGAGCTCTATTTGACATGTAGGAAATAG
ATGTTTCAATTCAAGTGAAATCGACGAATTAACTCAAGAAGCTAGTATGAGACTGTAGTC
ACTAATTGTACTGTCGATTGACTGGGACTAACATAACATGTAACTTGTTCTAAATTTGAC
TACTTATGAAAGGAAGATCGAATTAGCAGATTG