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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os12t0120100-01
CDS Infomation

cds chromosome:IRGSP-1.0:12:954491:955661:-1 gene:Os12g0120100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF567 family protein. (Os12t0120100-01)
Sequence

ATGGCCGCCAAGGTGCATCCTAACGTCGCCGCCGCGCCACAGCCACCCTGCATTAGCAGC
ATCGTCTCCCAACAACAAGAAGAAGAGGAGCCCCCGGTGGTGCTCACGGTGTGGCGCAAG
TCTCTCCTCTTCAACTGCCACGGCTTCACCGTCTTCGACGCCAAGGGCAACCTCGCCTTC
CGCCTCGACTGCTACGACTCCACCAGCTCAAGGCGCGCCGACCTCGTCCTCATGGACGCC
GCCGGCAAGCCGCTCCTCACCATCCGCCGCAAGAGGATGAGCCTCTCCGACAGCTGGATC
ATCTACGACGGCGACGGCGCCGCCACCTCCACCGCCACGCCGCTCCTCTCCGTGCGCCGC
CGCCGCGTCGGCCTCCGCGCCTCCAAGTCCAAGGCCATCGCGCACGTCACGCCGCTCTCC
TCCTCCCTGCCGCTCCCGGAGGCCTACGTGGTGGAGGGCTCGTACGGGCGCCGGAGCTGC
GCGGTGCGCGACGCCCGCGGGGACGCCGTGGCGGAGGTGAGGCGGAAGGAGTCGGTCGGG
GACGACGTGTTCCGCCTCGTGGCGCAGCCCCGCCTGGGCGCGCCGCTCGCCATGGCCATC
GTCATCGCCATCGACGAGATGCTCCGCGGCGGCAGCTCATCGCTGCTGCGGAGGACATGC
TCCGCGTAA

Peptide Sequence

PEP ID

Os12t0120100-01
PEP Infomation

pep chromosome:IRGSP-1.0:12:954491:955661:-1 gene:Os12g0120100 transcript:Os12t0120100-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF567 family protein. (Os12t0120100-01)
Sequence

MAAKVHPNVAAAPQPPCISSIVSQQQEEEEPPVVLTVWRKSLLFNCHGFTVFDAKGNLAF
RLDCYDSTSSRRADLVLMDAAGKPLLTIRRKRMSLSDSWIIYDGDGAATSTATPLLSVRR
RRVGLRASKSKAIAHVTPLSSSLPLPEAYVVEGSYGRRSCAVRDARGDAVAEVRRKESVG
DDVFRLVAQPRLGAPLAMAIVIAIDEMLRGGSSSLLRRTCSA

Transcript Sequence

Transcript ID

Os12t0120100-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:12:954491:955661:-1 gene:Os12g0120100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Protein of unknown function DUF567 family protein. (Os12t0120100-01)
Sequence

ATTCCCCAACCCCAACCATTCCTATTTCTAAACAACACACCTCCTCTGCACTTGCTCCTT
CTCTTCTTCTGTCCATCGAATCGACAAGAAGAAATTTACAAGCAAGAATGGCCGCCAAGG
TGCATCCTAACGTCGCCGCCGCGCCACAGCCACCCTGCATTAGCAGCATCGTCTCCCAAC
AACAAGAAGAAGAGGAGCCCCCGGTGGTGCTCACGGTGTGGCGCAAGTCTCTCCTCTTCA
ACTGCCACGGCTTCACCGTCTTCGACGCCAAGGGCAACCTCGCCTTCCGCCTCGACTGCT
ACGACTCCACCAGCTCAAGGCGCGCCGACCTCGTCCTCATGGACGCCGCCGGCAAGCCGC
TCCTCACCATCCGCCGCAAGAGGATGAGCCTCTCCGACAGCTGGATCATCTACGACGGCG
ACGGCGCCGCCACCTCCACCGCCACGCCGCTCCTCTCCGTGCGCCGCCGCCGCGTCGGCC
TCCGCGCCTCCAAGTCCAAGGCCATCGCGCACGTCACGCCGCTCTCCTCCTCCCTGCCGC
TCCCGGAGGCCTACGTGGTGGAGGGCTCGTACGGGCGCCGGAGCTGCGCGGTGCGCGACG
CCCGCGGGGACGCCGTGGCGGAGGTGAGGCGGAAGGAGTCGGTCGGGGACGACGTGTTCC
GCCTCGTGGCGCAGCCCCGCCTGGGCGCGCCGCTCGCCATGGCCATCGTCATCGCCATCG
ACGAGATGCTCCGCGGCGGCAGCTCATCGCTGCTGCGGAGGACATGCTCCGCGTAAGTCC
AAAATTCTTCCTTCTGTACAGTAGAGACATTGAGCTCGCTGCAAGGGGATCAGAAGCTCG
GGGTCCCACCTGTCAGCGACTCAGAAGCAGTGTTCCCGCAGCAGAGTCTAGCTAGATGCA
GGGCACTAAACACCCAGAAAAGAAAAGCACAGGAATTATGACAAACTTATTAGAGTTGGT
GCTGTATGCTACAATCAAGTTTTAGCTAGCTGCTGGGTTACTTAAGCATCATCCATGTTG
ATAGGAAATTAAGCAGGACTGATACAGTCAGGCTTGTGAAAGTAAAGCACAAGTAGGACA
ATACATATAGATACAGCCTAGTACAGGGGAGTTCTTTTTTTTTCTTCCCCGGATGTAATA
TTACAAAAGATTATTGTTTATTATTATATGG