Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os12t0118700-01
CDS Infomation	cds chromosome:IRGSP-1.0:12:906322:908669:1 gene:Os12g0118700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os12t0118700-01)
Sequence	ATGTCTGACCATCGAACACACGCGAGCGACTGTCATCCAGTTGCCAGCCAACCAGATGTT CAGTGCCTAGTTTGCACAAGGCCGTTTACTTTGGATGCTCAGGTGACCGATACCTTTGAA GCTTTAGCCATATGCAGGGACTGCAAGATGACAGTACTCAATGATGATGAAAGAGATGAA ATAACCAGCACTTATCGGCAGAACACACGGAGGAGGCAGATATCCAGGACTGCAAGCATT GATTTCCTGGAGGACGCATTCTTGCAGGAGTTTTCTCAGCTGATCGACTTAGCAAGAAGA CAAGGTCGTGAAACGGATATTGATTCTTCGTCGGTCGCGCCGCAACATGCATCGTTTAAT TCAACACCAAGCCAATCTCAAAGATGGCATGCTTCAGATGATGAGAGCGATGGCCTTAAT TATGTTGATTCTGTGTTTGGTGAAATTGAATCTGCCATCAGTCTTGGTGACTATGGTGGA GATTCAGATACCTCCATAGAGGAACATAGCGTGATGACAAGGAGGAGGATTTCCATTCAA CTTGACAATGACAGCTACATGAACACAGATACTGATATTGATCCCATGAATGCTAGACTG GATCAGTGGGATTCAGATGACCAGGAAGATGTGGAAGAGTCTGGTTTTGATGAAATAGTC AACACCATGACCCAGCACCAGCAGCAATCACATGATATTCAGCTAAGTGGATTGAGTGAG GACGAATCTGAAGATGGTGTATGGAATTGGAGTGTGAGTGTACGTCAAAGAGCAAATGTG ACCAACTTGCTAGATGACATGGAAGAGCCAGAAATGAGGACAACTTTTGTCGGGAATCCA GATGACTATGTTGATGCAAGGCAGTTTGAGATGCTCCTTGAGCAATTTGCTGAGGACAAC GATTCCAGAAGAGGAGCTCCACCAGCAGCGACATCCTTTATTGAAAATCTCCCCTCCGTG ATTATCTCTGCAAGCCATCAGACAAATGGTGATGTTATTTGTCCAGTCTGCAAAGACCCA ATTCCTACCAGAGCTAGAGCAAAACAGCTACCATGCATGCATCTTTATCATTCATCGTGC ATCTTGCCATGGCTTAGTTCTAGAAATACATGTCCTGTCTGCCGATATGAGCTTCCTACA GATGATGCAGAGTATGAAAGGTCCAAGCAAGCCACAACCAATGTAAGAGACATTCAGGTT GTGGAAGAAATTTCTGATGAACAAGAGGTCCAGGTAACTCGTCAGATGGCTGCTGGTGTG ATCGAAGAGACTAATACAAGTGAACACAATGTTCGTGTTGATGAGCAACCAAACAGTGCA CGCAGGCGCAGTGGATGGCTTTTTATTGCTGCTGCTCCAGTTGTAAGCCTCATCGGTTTC GCTCTAGTTTTATGCTTTACAAATCCCGCTAGGAGTGGTAGAAGGCAACTGTACTGTAGA TCCCCAAGTGCCACTGAAGTACATGTGGACACCAAAAAGAGTTGGTGGTCTATGTTCTAG

Peptide Sequence

PEP ID	Os12t0118700-01
PEP Infomation	pep chromosome:IRGSP-1.0:12:906322:908669:1 gene:Os12g0118700 transcript:Os12t0118700-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os12t0118700-01)
Sequence	MSDHRTHASDCHPVASQPDVQCLVCTRPFTLDAQVTDTFEALAICRDCKMTVLNDDERDE ITSTYRQNTRRRQISRTASIDFLEDAFLQEFSQLIDLARRQGRETDIDSSSVAPQHASFN STPSQSQRWHASDDESDGLNYVDSVFGEIESAISLGDYGGDSDTSIEEHSVMTRRRISIQ LDNDSYMNTDTDIDPMNARLDQWDSDDQEDVEESGFDEIVNTMTQHQQQSHDIQLSGLSE DESEDGVWNWSVSVRQRANVTNLLDDMEEPEMRTTFVGNPDDYVDARQFEMLLEQFAEDN DSRRGAPPAATSFIENLPSVIISASHQTNGDVICPVCKDPIPTRARAKQLPCMHLYHSSC ILPWLSSRNTCPVCRYELPTDDAEYERSKQATTNVRDIQVVEEISDEQEVQVTRQMAAGV IEETNTSEHNVRVDEQPNSARRRSGWLFIAAAPVVSLIGFALVLCFTNPARSGRRQLYCR SPSATEVHVDTKKSWWSMF

Transcript Sequence

Transcript ID	Os12t0118700-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:12:906322:908669:1 gene:Os12g0118700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Zinc finger, RING/FYVE/PHD-type domain containing protein. (Os12t0118700-01)
Sequence	ACACTTGGCAGAGGCAGCCGGCTTTCCCTTTCCCCTTCCCTCTCGTCGTCTTCTTCGTCT CCCTACCTCCTCTTACCTCAACCTCCAATAATCCCCATCTTCAAACCCCCCTCAAAATCC ATATTTGGTGTTGCTCCACTGATTGATTCCACTCAAGATTGTCGTCAATCGGTCTCTGCA TATGGCAGTTGGTTCCTCCTGCCCACCACCACCAGCCCTAGTTTAGGCCTCCCCCATCAA ATCTACTGCCATCCCCGACTAGTATACCTCAACTCTTCAATTTCTCTTGATTCAAATTCA AATGAGGGGGATGCTTCCTCTGCTCTGCTGCAGTAGCGCTTAATTGACAAGGCGGGGGTC CCGTTGTTTCGCGCTGCGATCTCTCATCACTTCTTCTCCGCAATCTCTAGCTGGTCTACT TTGTCCAATAGCGAACTGCTGACCAAATTCAGTGTGCCCTGTTCAGTTCATCAGGATATC CATGTCTGACCATCGAACACACGCGAGCGACTGTCATCCAGTTGCCAGCCAACCAGATGT TCAGTGCCTAGTTTGCACAAGGCCGTTTACTTTGGATGCTCAGGTGACCGATACCTTTGA AGCTTTAGCCATATGCAGGGACTGCAAGATGACAGTACTCAATGATGATGAAAGAGATGA AATAACCAGCACTTATCGGCAGAACACACGGAGGAGGCAGATATCCAGGACTGCAAGCAT TGATTTCCTGGAGGACGCATTCTTGCAGGAGTTTTCTCAGCTGATCGACTTAGCAAGAAG ACAAGGTCGTGAAACGGATATTGATTCTTCGTCGGTCGCGCCGCAACATGCATCGTTTAA TTCAACACCAAGCCAATCTCAAAGATGGCATGCTTCAGATGATGAGAGCGATGGCCTTAA TTATGTTGATTCTGTGTTTGGTGAAATTGAATCTGCCATCAGTCTTGGTGACTATGGTGG AGATTCAGATACCTCCATAGAGGAACATAGCGTGATGACAAGGAGGAGGATTTCCATTCA ACTTGACAATGACAGCTACATGAACACAGATACTGATATTGATCCCATGAATGCTAGACT GGATCAGTGGGATTCAGATGACCAGGAAGATGTGGAAGAGTCTGGTTTTGATGAAATAGT CAACACCATGACCCAGCACCAGCAGCAATCACATGATATTCAGCTAAGTGGATTGAGTGA GGACGAATCTGAAGATGGTGTATGGAATTGGAGTGTGAGTGTACGTCAAAGAGCAAATGT GACCAACTTGCTAGATGACATGGAAGAGCCAGAAATGAGGACAACTTTTGTCGGGAATCC AGATGACTATGTTGATGCAAGGCAGTTTGAGATGCTCCTTGAGCAATTTGCTGAGGACAA CGATTCCAGAAGAGGAGCTCCACCAGCAGCGACATCCTTTATTGAAAATCTCCCCTCCGT GATTATCTCTGCAAGCCATCAGACAAATGGTGATGTTATTTGTCCAGTCTGCAAAGACCC AATTCCTACCAGAGCTAGAGCAAAACAGCTACCATGCATGCATCTTTATCATTCATCGTG CATCTTGCCATGGCTTAGTTCTAGAAATACATGTCCTGTCTGCCGATATGAGCTTCCTAC AGATGATGCAGAGTATGAAAGGTCCAAGCAAGCCACAACCAATGTAAGAGACATTCAGGT TGTGGAAGAAATTTCTGATGAACAAGAGGTCCAGGTAACTCGTCAGATGGCTGCTGGTGT GATCGAAGAGACTAATACAAGTGAACACAATGTTCGTGTTGATGAGCAACCAAACAGTGC ACGCAGGCGCAGTGGATGGCTTTTTATTGCTGCTGCTCCAGTTGTAAGCCTCATCGGTTT CGCTCTAGTTTTATGCTTTACAAATCCCGCTAGGAGTGGTAGAAGGCAACTGTACTGTAG ATCCCCAAGTGCCACTGAAGTACATGTGGACACCAAAAAGAGTTGGTGGTCTATGTTCTA GAATGTTCCGTTGGTACATCTGATAACAAAATGACTATATGGTGGTGTGTGATTGTTTCT TTAGAATAGTTTTATTTTAAAATTTTCAAACGTTGTAGTTGCTGCAGTTACCGGTCGGAG TGTTGTAAAAGAATTCACATGCCACCGGTTGTAAAAGAATTCACATGCCTACTTTCTTCT GCTACTTTGCTCAGTCAAGCAAAGTGTGTATTGATACTTGCTATTTGTTTAACATATATG TGTCATTGGATGTCC