Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os12t0118400-02
CDS Infomation	cds chromosome:IRGSP-1.0:12:891788:898384:1 gene:Os12g0118400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Inwardly rectifying potassium channel subunit. (Os12t0118400-01);Similar to Catalytic/ hydrolase. (Os12t0118400-02)
Sequence	ATGTACTGGTTCATCACCACCCTCTCCACCGTCGGCTACGGCGACATGCACGCCGAGAAC ACCGGAGAGATGGTCTACACCACCGCCTACATGCTCTTCAACCTCAGCCTCACCGCCTAC ATCATCGGCAACATGACCAACCCTGTCGTCCATGGCACCAGCCGCACCAGGAAATTCTTG ATCAGGTCAATGCCGATGCATCTCCCACGCTCCCTCCAATACCCACCCTCGACTCCACAC CCTCTACATTCCACCGCCTTCTCCCACAGCCTCCGCCCTCGCCGTCCCAATGGTCCTCCC CCAGCCTTCGCCTCTGCCGAGTTCCCAGGTTCAGTTCCAGACAGTGCCCAGATGCCACCA CGACGCCGCCGCCGCCGGAGTGTGGCTGGCATTGACCAGGACGATCTCCTTGACCCCGAC GCCCTCGCCGACCCAGACAGCAGCTTCTACGAGATCAATGGCGTAAGGGTCCACCACAAG GTTTGCACCCATGAGGATTCCAGTGACCAATCTCCAGACTCTGCCATCACAAACGCGGAC CAAAACCAAATTGGTTTGCCCATAGTGCTATTACATGGGTTTGGCTCGTCGGTCTTCTCT TGGACCCACATCATGCGCCCTCTAGCCCGCATTGCTGGTGCCAAGGTTCTAGCCTTTGAT CGGCCTGCCTTTGGTCTGACATCCCGAACCATCTGGTCTGGTGATGACACCAAGCCTATC AACCCCTACTCCATGGCCTTCTCAGTCATGGCAACTTTGGCATTCATTGACCAACTCGGT GCCAAGAAGGCCGTCCTTGTCGGGCACTCAGCTGGTTGCCTTGTGGCAGTGGAGGCATAC TTTGAGGCACCAGAAAGGGTAGCTGCACTTGTGCTGGTTGCACCAGCCATTTTTGTGCCA GTTTTCAGGAGGAAAGGTGTGAAGGAGAATGGTGTAGGTGAACAAGAATGGCAGAATAAG AAGGATTCCAATGATTCAAATTTGCCTACAAATCCACTCAATAGGATTTGGGGAAAATTC CTCGAGCTATGCTTGTGGATTGCAGGGTTTCTTATGAATATGATTAGGGCAATAGGTGGT GTTGTTCGATCTTTGTATTATAAATCTGTTGTTGCTGTTCTTCGATCATCAGTTGGCGTG ATGCTGGTAAGATTGATCATGGATAAGTTTGGTATATTGGCTGTCCGCAATGCATGGTAT GACCCAAGCAAAGTGACGGATCATGTCATTCAAGGTTACACTAAGCCATTAAGATCCAGA GGTTGGGAGATGGCTCTTTTGGAGTACACTATATCCATGATCATGGATTCTATATCATCA TCGAAAGTGCCTGTCTCAGAAAGGCTTTCTGAGATCTCGTGCCCAGTGCTAGTGGTGAGT GGAGACACTGATCGCCTTGTTCCTCGTTGGAATACCGAGCGCGTAGCACGTGCGATTCCT GGTGCAGGATTTGAGGTGATCAAGAACTCTGGGCACTTGCCACAGGAGGAACGACCCGAA GAATTTGTCTCTGTTGTCGAAAGGTTTCTGAGAAGAGCTTTTGGGAGACCCAACAACGAG CAAGAGCAAGTGTTGCAAGCAGCTGTATGA

Peptide Sequence

PEP ID	Os12t0118400-02
PEP Infomation	pep chromosome:IRGSP-1.0:12:891788:898384:1 gene:Os12g0118400 transcript:Os12t0118400-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Inwardly rectifying potassium channel subunit. (Os12t0118400-01);Similar to Catalytic/ hydrolase. (Os12t0118400-02)
Sequence	MYWFITTLSTVGYGDMHAENTGEMVYTTAYMLFNLSLTAYIIGNMTNPVVHGTSRTRKFL IRSMPMHLPRSLQYPPSTPHPLHSTAFSHSLRPRRPNGPPPAFASAEFPGSVPDSAQMPP RRRRRRSVAGIDQDDLLDPDALADPDSSFYEINGVRVHHKVCTHEDSSDQSPDSAITNAD QNQIGLPIVLLHGFGSSVFSWTHIMRPLARIAGAKVLAFDRPAFGLTSRTIWSGDDTKPI NPYSMAFSVMATLAFIDQLGAKKAVLVGHSAGCLVAVEAYFEAPERVAALVLVAPAIFVP VFRRKGVKENGVGEQEWQNKKDSNDSNLPTNPLNRIWGKFLELCLWIAGFLMNMIRAIGG VVRSLYYKSVVAVLRSSVGVMLVRLIMDKFGILAVRNAWYDPSKVTDHVIQGYTKPLRSR GWEMALLEYTISMIMDSISSSKVPVSERLSEISCPVLVVSGDTDRLVPRWNTERVARAIP GAGFEVIKNSGHLPQEERPEEFVSVVERFLRRAFGRPNNEQEQVLQAAV

Transcript Sequence

Transcript ID	Os12t0118400-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:12:891788:898384:1 gene:Os12g0118400 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Inwardly rectifying potassium channel subunit. (Os12t0118400-01);Similar to Catalytic/ hydrolase. (Os12t0118400-02)
Sequence	GTGTGGGCTGGCCCCCGGCCGGCGGGTGGCCGGGTGGGGAGGAGGTCGGCAGGGCGAGGC GAGAGAGGCGCCCGGCGACGGGCGATGTGGAAAGAGGTGCTCGCGTCGATGCGGTCGTCG TCGCCGCCGGCAAGGTGGGGGGAGGTGGAGGCAGGGAAGGGGAAGAGTGGAGGGAGTGGG AAGGGCGGCGACCGGCGGCGAGAGTGCATGGAGAGGGAGGAGACAAGGAAGCCAGCGGCG AGCGCGCAGGTAGATCCTCTTCATCGCCACTTTGGGCCGCCTCGTCGCCCGCAGGAGGTG GCCAAGTCGATGTCGGCAGTTCTACGTCGCCTCCATGTACTGGTTCATCACCACCCTCTC CACCGTCGGCTACGGCGACATGCACGCCGAGAACACCGGAGAGATGGTCTACACCACCGC CTACATGCTCTTCAACCTCAGCCTCACCGCCTACATCATCGGCAACATGACCAACCCTGT CGTCCATGGCACCAGCCGCACCAGGAAATTCTTGATCAGGTCAATGCCGATGCATCTCCC ACGCTCCCTCCAATACCCACCCTCGACTCCACACCCTCTACATTCCACCGCCTTCTCCCA CAGCCTCCGCCCTCGCCGTCCCAATGGTCCTCCCCCAGCCTTCGCCTCTGCCGAGTTCCC AGGTTCAGTTCCAGACAGTGCCCAGATGCCACCACGACGCCGCCGCCGCCGGAGTGTGGC TGGCATTGACCAGGACGATCTCCTTGACCCCGACGCCCTCGCCGACCCAGACAGCAGCTT CTACGAGATCAATGGCGTAAGGGTCCACCACAAGGTTTGCACCCATGAGGATTCCAGTGA CCAATCTCCAGACTCTGCCATCACAAACGCGGACCAAAACCAAATTGGTTTGCCCATAGT GCTATTACATGGGTTTGGCTCGTCGGTCTTCTCTTGGACCCACATCATGCGCCCTCTAGC CCGCATTGCTGGTGCCAAGGTTCTAGCCTTTGATCGGCCTGCCTTTGGTCTGACATCCCG AACCATCTGGTCTGGTGATGACACCAAGCCTATCAACCCCTACTCCATGGCCTTCTCAGT CATGGCAACTTTGGCATTCATTGACCAACTCGGTGCCAAGAAGGCCGTCCTTGTCGGGCA CTCAGCTGGTTGCCTTGTGGCAGTGGAGGCATACTTTGAGGCACCAGAAAGGGTAGCTGC ACTTGTGCTGGTTGCACCAGCCATTTTTGTGCCAGTTTTCAGGAGGAAAGGTGTGAAGGA GAATGGTGTAGGTGAACAAGAATGGCAGAATAAGAAGGATTCCAATGATTCAAATTTGCC TACAAATCCACTCAATAGGATTTGGGGAAAATTCCTCGAGCTATGCTTGTGGATTGCAGG GTTTCTTATGAATATGATTAGGGCAATAGGTGGTGTTGTTCGATCTTTGTATTATAAATC TGTTGTTGCTGTTCTTCGATCATCAGTTGGCGTGATGCTGGTAAGATTGATCATGGATAA GTTTGGTATATTGGCTGTCCGCAATGCATGGTATGACCCAAGCAAAGTGACGGATCATGT CATTCAAGGTTACACTAAGCCATTAAGATCCAGAGGTTGGGAGATGGCTCTTTTGGAGTA CACTATATCCATGATCATGGATTCTATATCATCATCGAAAGTGCCTGTCTCAGAAAGGCT TTCTGAGATCTCGTGCCCAGTGCTAGTGGTGAGTGGAGACACTGATCGCCTTGTTCCTCG TTGGAATACCGAGCGCGTAGCACGTGCGATTCCTGGTGCAGGATTTGAGGTGATCAAGAA CTCTGGGCACTTGCCACAGGAGGAACGACCCGAAGAATTTGTCTCTGTTGTCGAAAGGTT TCTGAGAAGAGCTTTTGGGAGACCCAACAACGAGCAAGAGCAAGTGTTGCAAGCAGCTGT ATGATATGAAACCAGTACCTGTAGATAAGCATCTAGTACTAGATAACCAATACATGTTTA GATGCGTTCTGTACTAGTTCTCTGTAAGCCGTTAAATTTTATTTGCTAAAAATAATATCA TTAAGTTAACATT