Gene sequences

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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os12t0117300-00
CDS Infomation	cds chromosome:IRGSP-1.0:12:858569:860590:-1 gene:Os12g0117300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Mannan endo-1,4-beta-mannosidase 8. (Os12t0117300-00)
Sequence	ATGGAAGACGCCCACCACCACCACTGGACAATGGTGGAGTGCAGCGGAACTCAGCTCTGG GCCTCCGGCCGCCCCTTCATCATCCACGGCTTCAACACCTACTGGCTCATGTCATTCGCC GCTGACCAAGCCACGCGCCCGCGGGTCACCGCCGCCATCGCCGAGGCCGCCGAGGCCGGC CTCAACGTCTGCCGCACCTGGGCCTTTAGTGACGGCGGTTACCGCGCGCTGCAGACCGTA CCCTTCCACTACGACGAGGATGTCTTCCAGGCTTTAGACTTTGTGGTCAGCGAGGCAAAA AGGCATAACATGAGGTTGATACTGTCACTTTGTAACAACTGGGAAGATTATGGAGGCAAG GCACAGTATGTGAGATGGGGAAAAGAGGCTGGTCTAGATCTTACTTCTGAAGATGACTTC TTCTCTGACCCAACAATTAAGAGCTACTACAAAGCTTTTGTTGAGGCTGTTGTGACAAGA ATAAACACGGTTACGAATGAAACCTACAAAGATGATCCTACTATTCTTGCCTGGGAGCTA ATTAATGAGCCACGCTGCCCTTCAGATCCATCTGGAGATACTTTGCAGGCATGGATAGAA GAGATGGCATCTTATGTGAAGAGTATAGACCCTGTGCATCTCTTGGAGATTGGTATTGAA GGCTTTTATGGCCTATCCACTCCAGAACTTCTGCCTGTTAACCCAGATGAGTATTCAGGG CATGCTGGAACAGACTTCATCAGGAACCATCAAGCACCTGGAATTGACCTGGCGTCTATT CATGTTTACTCTGACACTTGGCTGCCTCACTCGATAAAGGAAAATCACCTTCAATTTGTG GATAAATGGATGCAACAACATATTCATGATGCAGCCAATTTACTTGGGATGCCAATTGTG GTTGGGGAGTTTGGGGTATCAGTTAAGGACGGGAAGTTTGGTAATGAATTCCGTGAAGAT TTCATGAAGACAGTTTACAGAATTTTCTTGAGTTCTTGGAAGGAAGGAGTGATTGGAGGA GGTTGCCTTCTTTGGCAGCTTTTCCCTGAAGGAGCAGAGCACATGGATGATGGTTATGCA GTTATTTTTGCAAAATCACCATCCACATTAAGCTTACTTGCAAATCACTTAAGGTGTCTG GAATGTTGA

Peptide Sequence

PEP ID	Os12t0117300-00
PEP Infomation	pep chromosome:IRGSP-1.0:12:858569:860590:-1 gene:Os12g0117300 transcript:Os12t0117300-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Mannan endo-1,4-beta-mannosidase 8. (Os12t0117300-00)
Sequence	MEDAHHHHWTMVECSGTQLWASGRPFIIHGFNTYWLMSFAADQATRPRVTAAIAEAAEAG LNVCRTWAFSDGGYRALQTVPFHYDEDVFQALDFVVSEAKRHNMRLILSLCNNWEDYGGK AQYVRWGKEAGLDLTSEDDFFSDPTIKSYYKAFVEAVVTRINTVTNETYKDDPTILAWEL INEPRCPSDPSGDTLQAWIEEMASYVKSIDPVHLLEIGIEGFYGLSTPELLPVNPDEYSG HAGTDFIRNHQAPGIDLASIHVYSDTWLPHSIKENHLQFVDKWMQQHIHDAANLLGMPIV VGEFGVSVKDGKFGNEFREDFMKTVYRIFLSSWKEGVIGGGCLLWQLFPEGAEHMDDGYA VIFAKSPSTLSLLANHLRCLEC

Transcript Sequence

Transcript ID	Os12t0117300-00
Transcript Infomation	cdna chromosome:IRGSP-1.0:12:858569:860590:-1 gene:Os12g0117300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Mannan endo-1,4-beta-mannosidase 8. (Os12t0117300-00)
Sequence	CGACGCCTCGCCTTCCCCTCCACCACCACCTGCTCCTCCTCCTCCTCGCCCTCGCCTCTT ACATGGAAGACGCCCACCACCACCACTGGACAATGGTGGAGTGCAGCGGAACTCAGCTCT GGGCCTCCGGCCGCCCCTTCATCATCCACGGCTTCAACACCTACTGGCTCATGTCATTCG CCGCTGACCAAGCCACGCGCCCGCGGGTCACCGCCGCCATCGCCGAGGCCGCCGAGGCCG GCCTCAACGTCTGCCGCACCTGGGCCTTTAGTGACGGCGGTTACCGCGCGCTGCAGACCG TACCCTTCCACTACGACGAGGATGTCTTCCAGGCTTTAGACTTTGTGGTCAGCGAGGCAA AAAGGCATAACATGAGGTTGATACTGTCACTTTGTAACAACTGGGAAGATTATGGAGGCA AGGCACAGTATGTGAGATGGGGAAAAGAGGCTGGTCTAGATCTTACTTCTGAAGATGACT TCTTCTCTGACCCAACAATTAAGAGCTACTACAAAGCTTTTGTTGAGGCTGTTGTGACAA GAATAAACACGGTTACGAATGAAACCTACAAAGATGATCCTACTATTCTTGCCTGGGAGC TAATTAATGAGCCACGCTGCCCTTCAGATCCATCTGGAGATACTTTGCAGGCATGGATAG AAGAGATGGCATCTTATGTGAAGAGTATAGACCCTGTGCATCTCTTGGAGATTGGTATTG AAGGCTTTTATGGCCTATCCACTCCAGAACTTCTGCCTGTTAACCCAGATGAGTATTCAG GGCATGCTGGAACAGACTTCATCAGGAACCATCAAGCACCTGGAATTGACCTGGCGTCTA TTCATGTTTACTCTGACACTTGGCTGCCTCACTCGATAAAGGAAAATCACCTTCAATTTG TGGATAAATGGATGCAACAACATATTCATGATGCAGCCAATTTACTTGGGATGCCAATTG TGGTTGGGGAGTTTGGGGTATCAGTTAAGGACGGGAAGTTTGGTAATGAATTCCGTGAAG ATTTCATGAAGACAGTTTACAGAATTTTCTTGAGTTCTTGGAAGGAAGGAGTGATTGGAG GAGGTTGCCTTCTTTGGCAGCTTTTCCCTGAAGGAGCAGAGCACATGGATGATGGTTATG CAGTTATTTTTGCAAAATCACCATCCACATTAAGCTTACTTGCAAATCACTTAAGGTGTC TGGAATGTTGAGACTCAAAGTGGTGTTTCCCTTCTTTGTACTTCCTCCGTTTCATATTAT AAGACTTTC