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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os12t0116400-00
CDS Infomation

cds chromosome:IRGSP-1.0:12:802534:806073:-1 gene:Os12g0116400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:WRKY GENE 97 description:Similar to WRKY DNA binding domain containing protein, expressed. (Os12t0116400-00)
Sequence

ATGGCACTCGACTCTGTTCCATCCTACCCCAGCGATCTTGGATCCAGCAGGGCCAGGACG
CCGCAGCAGCAAAGGGTCAGGAAGGAGGAGCGGACATGGACGACCGACACCTACGCGCCG
TACGACGACGGCCACCAGTGGAGGAAGTACGGCGAGAAGAAACTCTCCAATTCCAACTTC
CCAAGGTTCTATTACAGATGCACCTACAAGAATGACATGAAGTGCCCTGCTACGAAGCAA
GTCCAGCAGAAGGACACTAATGATCCACCATTGTTCTCAGTCACTTACTTCAACCACCAC
ACCTGCAACAGCAGCCCAAAGATCGTAGGCAGCACTCCTGATTCTACTGTGCAGTCGAGG
AAAGCCATTTCGATCTGCTTCAATTCACATGGCAAAACCGGTGAACTGCCCACATTCTTG
TCACCATCAGCTTCATTGTTGTCGCCGAGCATGCAGCCGTACAGTTCCAACCAGCAACCT
GACATGAACACCTACAGTCGCCAGTTTCATTGGGCAGACACATCGTCATCTACAAGCTAT
GCTCCGGTTAAGATGGAGGCGGACGATTATGCGGAAGCAAGTGCTTCGCCCAGTACAACC
GGTGCTCTGTCGAGGACATTGCTGCCGATCGGTCAGTCAAGATGCATCGAGTATTTCCAT
TTCTTGTGA

Peptide Sequence

PEP ID

Os12t0116400-00
PEP Infomation

pep chromosome:IRGSP-1.0:12:802534:806073:-1 gene:Os12g0116400 transcript:Os12t0116400-00 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:WRKY GENE 97 description:Similar to WRKY DNA binding domain containing protein, expressed. (Os12t0116400-00)
Sequence

MALDSVPSYPSDLGSSRARTPQQQRVRKEERTWTTDTYAPYDDGHQWRKYGEKKLSNSNF
PRFYYRCTYKNDMKCPATKQVQQKDTNDPPLFSVTYFNHHTCNSSPKIVGSTPDSTVQSR
KAISICFNSHGKTGELPTFLSPSASLLSPSMQPYSSNQQPDMNTYSRQFHWADTSSSTSY
APVKMEADDYAEASASPSTTGALSRTLLPIGQSRCIEYFHFL

Transcript Sequence

Transcript ID

Os12t0116400-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:12:802534:806073:-1 gene:Os12g0116400 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:WRKY GENE 97 description:Similar to WRKY DNA binding domain containing protein, expressed. (Os12t0116400-00)
Sequence

TCTTCCTCTCCCTCTTCCCTACCAAGCGAGACCACTCGGCCCCCACAAAATCCTCCGCTT
CTTCTCCGAGACCGAGATGGCACTCGACTCTGTTCCATCCTACCCCAGCGATCTTGGATC
CAGCAGGGCCAGGACGCCGCAGCAGCAAAGGGTCAGGAAGGAGGAGCGGACATGGACGAC
CGACACCTACGCGCCGTACGACGACGGCCACCAGTGGAGGAAGTACGGCGAGAAGAAACT
CTCCAATTCCAACTTCCCAAGGTTCTATTACAGATGCACCTACAAGAATGACATGAAGTG
CCCTGCTACGAAGCAAGTCCAGCAGAAGGACACTAATGATCCACCATTGTTCTCAGTCAC
TTACTTCAACCACCACACCTGCAACAGCAGCCCAAAGATCGTAGGCAGCACTCCTGATTC
TACTGTGCAGTCGAGGAAAGCCATTTCGATCTGCTTCAATTCACATGGCAAAACCGGTGA
ACTGCCCACATTCTTGTCACCATCAGCTTCATTGTTGTCGCCGAGCATGCAGCCGTACAG
TTCCAACCAGCAACCTGACATGAACACCTACAGTCGCCAGTTTCATTGGGCAGACACATC
GTCATCTACAAGCTATGCTCCGGTTAAGATGGAGGCGGACGATTATGCGGAAGCAAGTGC
TTCGCCCAGTACAACCGGTGCTCTGTCGAGGACATTGCTGCCGATCGGTCAGTCAAGATG
CATCGAGTATTTCCATTTCTTGTGATGATTTTGATGGAAAGTGAAGGAGATGCATATACA
TTCTGAGGAGCCTCTTGGATGGTGCCAGATAGGGTTTTATATTGGGAGGTGGGGATGTTG
TGCTCATGAGATTCCATATACTAGTGGCATTATGTTGTTTTCTTCTTTGCATGTAGATTC
AAGCCAGATTTTTTTGCTTGAATGATGTAAAGAACTGAATTGGCATTTCTCTATCTAGTA
GGAAGGAGTACGTGATACAGAAAAAGGCTAATGTAGCAGAATCTGTTAAAT