Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os12t0114200-01
CDS Infomation	cds chromosome:IRGSP-1.0:12:707630:712835:-1 gene:Os12g0114200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os12t0114200-01)
Sequence	CAGGTCTTTCCATTTGGATCTGTTCCGTTGAAAACTTATCTTCCTGATGGAGATATTGAT TTGACTGCCTTTGGCCATTCAAGTGATGAAATTTTAGCAAAACAAGTACAGGCTGTTTTA GAATCAGAAGAGGCAAGGAAAGACGCTGAATTTGAAGTCAAGGATGTCCAATATATTCAT GCAGAGGTCAAGTTGGTGAAATGCATTGTTCAAAACATCATTGTAGACATCTCATTCAAT CAGTTTGGTGGACTGTGTACCCTTTGTTTTCTCGAGAAGGTTGATCAAAAATTTGAAAAA AACCACCTTTTCAAGAGAAGTATAATGCTGATAAAAGCTTGGTGTTATTATGAAAGCCGC ATTCTTGGTGCTCACCATGGATTAATTTCTACCTATGCATTGGAGATATTGGTGTTATAT ATTTTCCATCTCTTCCATGGAACATTGGATGGTCCACTAGCTGTTCTCTATAGGTTTCTG GACTACTATAGCAAATTTGACTGGGACAATAAGGGTATAAGCTTGTATGGCCCTATTTCC TTGTCTTCCCTGCCTGAGCTAGTTACTGACTCTCCAGACACGGTTAATGATGATTTTACT ATGCGAGAGGACTTTCTCAAGGAATGTGCACAGTGGTTTACTGTACTCCCTAGAAACTCT GAGAAAAATACTCAGGTCTTTCCCCGAAAATTTTTCAACATAGTGGACCCATTGAAGCAG AGTAACAATCTAGGGCGCAGTGTCAGCAAAGGTAACTTCCTCCGGATACGCAGTGCATTT GATTTTGGTGCCCGGAAGCTTGGGAAGATTCTTCAAGTGCCTGACAATTTTACTGTGGAT GAAGTGAATCAATTCTTCAGGAACACATTGAAGAGACACTGCAGTAGGGTAAGGCCTGAT GTGCAAGAAATAGCTCTGGACTTCAATGGTGAAAGAGCCGACAACGATAGTTCGCCTTTA TACAGTAATAATTCCTTTGGTGATCTATCTGATGAGTTCAATAACATCAGCATTTCAGAT TCCAGCAACCATGGGTCGCTAAGGCAAAATGGATGGAATTATGTGGCTGAGAACAAGGAA AGGAAGTCTGTTTCTGGTGGCTGGCTGGCAAGCAAAGCAACAAATCCTGCAGCTACTAAT TCAACTGGTATGACGAATGGCAGTGACTCTTGTGAGCCTGCATCACCATCAATTACCGGA GCACATAGCTTGCCATCTGAGGAAGGTCATGACGCACTGGATCTCTTTAATGAGTCAGAA AGTGGTACGAAGGCTGGCATAAAGTATGACACAAACCCATCACACCATGGAATGTCAACA GTGAGTTACGCAGGCAGATCCCACCAGTCCTTTGAAGAGGTGGATAATGATGATAGAGGT ACCATTGATAGCAATTGGTCAGATCTCACCGGAGACTACACAACAAATTTTAATAATCTT CTCTATGCTCAAGGGTTCCACCAAGATTATCCAATGAACCAATATTATCCATTTGGTCCA GTGTACTATCAAATGCCTTCCCCACCACCTGCACGATATCAGAATAGGCGATCATCAAAT GGTCATAGCAGAAATAATGTGTATGGATATGCTGGTACAAATGGAATAGGCCCTGCTCCT TGTCCACCAGGTTATTTAATTATGAGGACATATAGTCAAATAGATGATTCACATCGAGCT CGTGGAACTGGCACATACTTCCCTAACCCAAACTTGTCCAAAGACAGGTCACCTTCTGGA CGAGGCGGAAGGGGAAAAACTCATTTCCTGTCACATAACCATCAAAGACCACACCACTAC GGTAGAGCTGATATGTCAGCAGATTTGACTCCTTCGGAGGAATTGAGACATATTTATGAT CCTGATGCAAATGACTTGGGAATCCCCTCTTCACTGCACATATCAATACCTTCTCCATCT TCGGAATCTCCAAGGGAAATTGTGCATGGCAATGGTTTTATTCAGCCTCCAGCTAAGAAA CTTGAGTTTGGGACCTTGGGAGCATTGCCTTTGGAAGTTACATCCCAAGAGCTTGGTATT AACAGATTGAATACTGCTTCTGACAGCCAACCTTCTGCATCTGCAAGCCCTATGTCTCTG GCACATAATCCTGGAATTAGTTCTAATCAAATGAGGAATGCTCAGCCATATCATCTCAAG GACAACGGTGATTTCCCACCGCTATCTAGTTGA

Peptide Sequence

PEP ID	Os12t0114200-01
PEP Infomation	pep chromosome:IRGSP-1.0:12:707630:712835:-1 gene:Os12g0114200 transcript:Os12t0114200-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os12t0114200-01)
Sequence	QVFPFGSVPLKTYLPDGDIDLTAFGHSSDEILAKQVQAVLESEEARKDAEFEVKDVQYIH AEVKLVKCIVQNIIVDISFNQFGGLCTLCFLEKVDQKFEKNHLFKRSIMLIKAWCYYESR ILGAHHGLISTYALEILVLYIFHLFHGTLDGPLAVLYRFLDYYSKFDWDNKGISLYGPIS LSSLPELVTDSPDTVNDDFTMREDFLKECAQWFTVLPRNSEKNTQVFPRKFFNIVDPLKQ SNNLGRSVSKGNFLRIRSAFDFGARKLGKILQVPDNFTVDEVNQFFRNTLKRHCSRVRPD VQEIALDFNGERADNDSSPLYSNNSFGDLSDEFNNISISDSSNHGSLRQNGWNYVAENKE RKSVSGGWLASKATNPAATNSTGMTNGSDSCEPASPSITGAHSLPSEEGHDALDLFNESE SGTKAGIKYDTNPSHHGMSTVSYAGRSHQSFEEVDNDDRGTIDSNWSDLTGDYTTNFNNL LYAQGFHQDYPMNQYYPFGPVYYQMPSPPPARYQNRRSSNGHSRNNVYGYAGTNGIGPAP CPPGYLIMRTYSQIDDSHRARGTGTYFPNPNLSKDRSPSGRGGRGKTHFLSHNHQRPHHY GRADMSADLTPSEELRHIYDPDANDLGIPSSLHISIPSPSSESPREIVHGNGFIQPPAKK LEFGTLGALPLEVTSQELGINRLNTASDSQPSASASPMSLAHNPGISSNQMRNAQPYHLK DNGDFPPLSS

Transcript Sequence

Transcript ID	Os12t0114200-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:12:707630:712835:-1 gene:Os12g0114200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hypothetical conserved gene. (Os12t0114200-01)
Sequence	CAGGTCTTTCCATTTGGATCTGTTCCGTTGAAAACTTATCTTCCTGATGGAGATATTGAT TTGACTGCCTTTGGCCATTCAAGTGATGAAATTTTAGCAAAACAAGTACAGGCTGTTTTA GAATCAGAAGAGGCAAGGAAAGACGCTGAATTTGAAGTCAAGGATGTCCAATATATTCAT GCAGAGGTCAAGTTGGTGAAATGCATTGTTCAAAACATCATTGTAGACATCTCATTCAAT CAGTTTGGTGGACTGTGTACCCTTTGTTTTCTCGAGAAGGTTGATCAAAAATTTGAAAAA AACCACCTTTTCAAGAGAAGTATAATGCTGATAAAAGCTTGGTGTTATTATGAAAGCCGC ATTCTTGGTGCTCACCATGGATTAATTTCTACCTATGCATTGGAGATATTGGTGTTATAT ATTTTCCATCTCTTCCATGGAACATTGGATGGTCCACTAGCTGTTCTCTATAGGTTTCTG GACTACTATAGCAAATTTGACTGGGACAATAAGGGTATAAGCTTGTATGGCCCTATTTCC TTGTCTTCCCTGCCTGAGCTAGTTACTGACTCTCCAGACACGGTTAATGATGATTTTACT ATGCGAGAGGACTTTCTCAAGGAATGTGCACAGTGGTTTACTGTACTCCCTAGAAACTCT GAGAAAAATACTCAGGTCTTTCCCCGAAAATTTTTCAACATAGTGGACCCATTGAAGCAG AGTAACAATCTAGGGCGCAGTGTCAGCAAAGGTAACTTCCTCCGGATACGCAGTGCATTT GATTTTGGTGCCCGGAAGCTTGGGAAGATTCTTCAAGTGCCTGACAATTTTACTGTGGAT GAAGTGAATCAATTCTTCAGGAACACATTGAAGAGACACTGCAGTAGGGTAAGGCCTGAT GTGCAAGAAATAGCTCTGGACTTCAATGGTGAAAGAGCCGACAACGATAGTTCGCCTTTA TACAGTAATAATTCCTTTGGTGATCTATCTGATGAGTTCAATAACATCAGCATTTCAGAT TCCAGCAACCATGGGTCGCTAAGGCAAAATGGATGGAATTATGTGGCTGAGAACAAGGAA AGGAAGTCTGTTTCTGGTGGCTGGCTGGCAAGCAAAGCAACAAATCCTGCAGCTACTAAT TCAACTGGTATGACGAATGGCAGTGACTCTTGTGAGCCTGCATCACCATCAATTACCGGA GCACATAGCTTGCCATCTGAGGAAGGTCATGACGCACTGGATCTCTTTAATGAGTCAGAA AGTGGTACGAAGGCTGGCATAAAGTATGACACAAACCCATCACACCATGGAATGTCAACA GTGAGTTACGCAGGCAGATCCCACCAGTCCTTTGAAGAGGTGGATAATGATGATAGAGGT ACCATTGATAGCAATTGGTCAGATCTCACCGGAGACTACACAACAAATTTTAATAATCTT CTCTATGCTCAAGGGTTCCACCAAGATTATCCAATGAACCAATATTATCCATTTGGTCCA GTGTACTATCAAATGCCTTCCCCACCACCTGCACGATATCAGAATAGGCGATCATCAAAT GGTCATAGCAGAAATAATGTGTATGGATATGCTGGTACAAATGGAATAGGCCCTGCTCCT TGTCCACCAGGTTATTTAATTATGAGGACATATAGTCAAATAGATGATTCACATCGAGCT CGTGGAACTGGCACATACTTCCCTAACCCAAACTTGTCCAAAGACAGGTCACCTTCTGGA CGAGGCGGAAGGGGAAAAACTCATTTCCTGTCACATAACCATCAAAGACCACACCACTAC GGTAGAGCTGATATGTCAGCAGATTTGACTCCTTCGGAGGAATTGAGACATATTTATGAT CCTGATGCAAATGACTTGGGAATCCCCTCTTCACTGCACATATCAATACCTTCTCCATCT TCGGAATCTCCAAGGGAAATTGTGCATGGCAATGGTTTTATTCAGCCTCCAGCTAAGAAA CTTGAGTTTGGGACCTTGGGAGCATTGCCTTTGGAAGTTACATCCCAAGAGCTTGGTATT AACAGATTGAATACTGCTTCTGACAGCCAACCTTCTGCATCTGCAAGCCCTATGTCTCTG GCACATAATCCTGGAATTAGTTCTAATCAAATGAGGAATGCTCAGCCATATCATCTCAAG GACAACGGTGATTTCCCACCGCTATCTAGTTGATGCCATATAGTTCATTGCATATCAGAG GCAACTTGGTCCAAGAAAAGATACTGATAAATGGTGCGAGCACTTGGTGCAACAATAGCA GGGGTTATTCCACAAGACAAACATCATCCATCATGTACATCCTATCATTAACTTCACATT CTCCTATCTTCAATTCACCCTTGCTGTTGCTTTCCAAAAAAGAAAGAAAAAAAAACAGAA GGCTGATGCATCGCAGCTTGCTCTGCCATAACATTCCCTGCAAAGGAAATATGGAGGAAA GATAGAAGCACAATGTAGATACTTATGTTCTCTTTACCTTTGTCCCCTTGAAGAGGGAAC AAGTGTGGTAAAGTCAAAAAATGCTAGAAAGAGGGTGAGCTGTGTCTTGCTCTGTTGTTT TGACCTCATGAGCATTCCAGTTACTGGAGGGCTCATTGAGTGTGCTCTGTTTTGGTTTGG AGAGGCCTTCTGTTGAAAGGCCCCATTGTTTGAAGTAACATTTGCTGCCTCAAGCAATGG GTAGTTATAGGGGATAGATATGTACGAAACTTTCACTAGATTTACTGTCTTCATAGAAGC AGTTTAGTTAGTCTATACTAGCTCAGAGTAAAAATGATCCTTTTACTTTGCCTGTTGTGC TTC