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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os12t0113700-00
CDS Infomation

cds chromosome:IRGSP-1.0:12:690489:695233:-1 gene:Os12g0113700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Zinc finger, C3HC4 type family protein, expressed. (Os12t0113700-00)
Sequence

AGGAAAAAAGGAAGGAAAGGAGAGGACATCCTGTACGCCGTGTGCGTGCTCCTCCTCTGC
TGCGTCGATCGCCGACGTCGACATGCCGGTGCGCCGCCGCCTGATCCGAAGATCTGGCTG
CCGGACCACGCGCACCATCGCCGGCGGCGGGATGAGTCGTCGGAGATGGAGTGCAGCATA
TGCCTGGGGGAACTGGAGGAGGGGGAGAGGTGCTGCACGCTGGCGGCGTGCAGGCACGAG
TTCCACAAGGAATGCATCTACCGCTGGCTCGCCAACCGCAACACCTGCCCTCTCTGCCGC
CACATCTCCCTCCCCCCTGCTTCATCACCACCACCTGCGCCGCCGCCTCACCATGCTTCT
CCTCCTCCTTCCAATGTACTGGCTGCTGCTCATGTTTAG

Peptide Sequence

PEP ID

Os12t0113700-00
PEP Infomation

pep chromosome:IRGSP-1.0:12:690489:695233:-1 gene:Os12g0113700 transcript:Os12t0113700-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Zinc finger, C3HC4 type family protein, expressed. (Os12t0113700-00)
Sequence

RKKGRKGEDILYAVCVLLLCCVDRRRRHAGAPPPDPKIWLPDHAHHRRRRDESSEMECSI
CLGELEEGERCCTLAACRHEFHKECIYRWLANRNTCPLCRHISLPPASSPPPAPPPHHAS
PPPSNVLAAAHV

Transcript Sequence

Transcript ID

Os12t0113700-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:12:690489:695233:-1 gene:Os12g0113700 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Zinc finger, C3HC4 type family protein, expressed. (Os12t0113700-00)
Sequence

CACTGCCGCCTCCCCTCCTCCCCTCCGCGCCAGCCGGCCGGCGCCGCGCCGCCGCCGCCG
CGCGCCCCCCGCGCCGCCGCACAAGCCACCTCCACGCAGCCCCCGGCGCCGCCGCGCCGG
CCGCCCACCGCCGCCGCTGCCGCGTGGCCCCACGCGCCGCTGCGCAGGCCGCCTACGCGC
CGTCCCCCGCGCCGCCGCCTCCGCCACCGCGGCGCCGGCCGCCTGCACGCTTCTTCACTG
TGGGGTGAAGGAAAAAAGGAAGGAAAGGAGAGGACATCCTGTACGCCGTGTGCGTGCTCC
TCCTCTGCTGCGTCGATCGCCGACGTCGACATGCCGGTGCGCCGCCGCCTGATCCGAAGA
TCTGGCTGCCGGACCACGCGCACCATCGCCGGCGGCGGGATGAGTCGTCGGAGATGGAGT
GCAGCATATGCCTGGGGGAACTGGAGGAGGGGGAGAGGTGCTGCACGCTGGCGGCGTGCA
GGCACGAGTTCCACAAGGAATGCATCTACCGCTGGCTCGCCAACCGCAACACCTGCCCTC
TCTGCCGCCACATCTCCCTCCCCCCTGCTTCATCACCACCACCTGCGCCGCCGCCTCACC
ATGCTTCTCCTCCTCCTTCCAATGTACTGGCTGCTGCTCATGTTTAG