Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os12t0112600-01
CDS Infomation	cds chromosome:IRGSP-1.0:12:645370:651356:1 gene:Os12g0112600 gene_biotype:protein_coding transcript_biotype:protein_coding description:ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain containing protein. (Os12t0112600-01)
Sequence	ATGTGTATACTGTGCGCCGTGCAACGGTGGTCGCGGCGCGTCGCCACCATGCTGCCATGG CTGGTGCTCCCGCTCATCCTCCTCTGGGCGCTCTCCCAGCTCCTCCCCGCCGCCTACCGC TTCGAGGTCACCTCCCCTCGCCTCGCCTGCGTCTCCGTCCTCCTCCTCACCCTCTTCTGG TACGAGATCCTCCTCCCCCGCCTCTCCCTCTGGCGCGCCCGCCGCTCCGCCCGCCTCCGC GAGGAGCGCCGCGCCCACGCCCTCCAGCTCCACAAGCTCCGCAAGACCGCCACCCGCCGC TGCCGCAACTGCAACAACCCCTACCGCGACCAGAACCCCGGCGGCGGCAAGTTCATGTGC TCCTACTGCGGCCATGTCTCCAAGCGCCCCGTCCTCGACCTCGGCCCTGCCGGGACCCTC CCCACCGGCTGGCCCTGCACCCAGGATTGGCCAAATGCTGCCGGTGACCCTGCCTACTGG CTCGACCTCCGCTGCTCCTCCGATAACCTGTACTCGGGGTTCTCGTGGCGCTTGTTCTCT TCCTTCTGCGTCAGCATGAGGTGGTTCTGGAGGGAAGTGCTCAGATTTGGCTCCTCGGGG GACGGCGATGGCTTGGGCCGAGATGGTAAAAGATTAGCAAAAGAAGGGGAGAACGGAGCA AAGGCTGAGGAGAGCAGAGTCGAGAAGGCGAAAAGGAAGGCGGAGGAGAAGAGGTTGGCG AGGCTGGAGAAGGAAATGCTAGAGGAGGAGGAACGCAAGCAACGGGAGGAGATGGCAAAG CTCGTGGAGGAGCGGAGGAGGCTAAGGGATGAGAAAGCAGAGGCTGAAGAGAGATCCAAA GGCGCCACACCTGTTGGGGAGAAGGATCCTCGGAAGGAAGTGGAACGTAGACGGCAGGAG AGGAGGAGGAAGGACGAGAAGGATAAGGGATCAAGCAAGAGCAATTCAGATTGCGAGGAT ATCGAGAGAAGAGTAACCAGGGAAGGGGAGAGAAAGCGGGATTCTGATAGAAGAAATGAG CCAGAGAAGCGGGATGCAACAAGAGTTGGCGCTGAGGGTCATAAGCCCTATAATTTTGAT GCTAACAACCAGGGTAGTAAGACAGTACAGAGCAAGGCAAAGTACTTTGGCCGTATGACA GGCGGTCTGTTATCTTCTTCAAGAGGTTTTGGTGGCGGTTCCTTTTTTGGTAGAAGTGCT CAGACCTCTGCTCCTCAAGTTAACAAGGTGACTAAACCGCTTGTTACTGTAACTGACCAG AGTAACGTAGTCAAAAGAGATGCCCAACCTCCTGCAACAGCCAAATCTGCTACTGCTGGA GGAACGACAAATTCATGGACTAATGTTCATCGATCTGTTAGTCCAAATGTGCAGTCACAG CCTACTGGACTTAAAAAGTCATGGCACCAGCTGTTTAGTCGCTCAGCATCTGTGTCACCT TGTCCTGATGTTCCTGCTACAGCCCGTGAAATGAACGGGCAACCAGAACCATATGGAGCA CAAATTAGCAATGCTCAAATCTTCCTATCGCAGTATCCCCCTCTGGACAGTAACCCTAGT TCAAGCCGCTGTATGCAATTTCCAGGTTTCCCACCAGTGAATGGAGCACCTGCCAACATG TCACTCTCTCATTTTCCAGCTGGACATATGCCCTACTATTGTGAGCCAGAACCAACAGTG TTTGAAGAACCAGAACAATTTGAGGACCCATGCTATGATCCTGATGCAATTGCGTTGCTT GGGCCAGTTTCAGAGTCCCTAGATAACTTTCCTCTCGACTTGGATAGCGGGTTCATCTCT AGTGACATCACCAAGGAAACACATGCGAAGCCTTCACCAATCGAATCTCCTCTTTCAAGA TCACGTACATTCGAGGATAATCCTATTAGGCACTCAACTGGAAAAGGGCCTAATGGTTCT ATTTTGCCTGAAGCTAGCAATGAACATGGGGGCACATGGCAAATGTGGGGCACGCCATTA GTTCAAGAAAGTTTAGGTCTACGAGGTCCTCAGACTGAGTGGCTCCTACCAAACACAAAT CAATTTAACCATGGTGCCAGTCATTTGAATGGTGGAACAAGAAGCTCAGTGGGTTCTGGT TTGGATGACAATGATTTATGGCTGCAGAAAGCGCCTTTCCAGCAAATGCCTCTTGATACA AGGAGTCTGTTCCTTTCACATGATGTCTCAGAGAATGCTATACACAACGATTTGGATTTT GGATCACCAAACAAATCAGCCCGTTTGCACCCCATTGGGCCACCTGGTCATTCTTGGTCC AAGGAGGCAGTGGTGCTGAATGGACCTCAGGAAGCTAGTAAGATTTGCTCACCAACAGGG GCACATGTTGGTGGTGGCTTTTTTTCAACTAATCCTGATGTACAGTCAGTTTGGTCGTTC AATCAAAAAGAGACAACATAG

Peptide Sequence

PEP ID	Os12t0112600-01
PEP Infomation	pep chromosome:IRGSP-1.0:12:645370:651356:1 gene:Os12g0112600 transcript:Os12t0112600-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain containing protein. (Os12t0112600-01)
Sequence	MCILCAVQRWSRRVATMLPWLVLPLILLWALSQLLPAAYRFEVTSPRLACVSVLLLTLFW YEILLPRLSLWRARRSARLREERRAHALQLHKLRKTATRRCRNCNNPYRDQNPGGGKFMC SYCGHVSKRPVLDLGPAGTLPTGWPCTQDWPNAAGDPAYWLDLRCSSDNLYSGFSWRLFS SFCVSMRWFWREVLRFGSSGDGDGLGRDGKRLAKEGENGAKAEESRVEKAKRKAEEKRLA RLEKEMLEEEERKQREEMAKLVEERRRLRDEKAEAEERSKGATPVGEKDPRKEVERRRQE RRRKDEKDKGSSKSNSDCEDIERRVTREGERKRDSDRRNEPEKRDATRVGAEGHKPYNFD ANNQGSKTVQSKAKYFGRMTGGLLSSSRGFGGGSFFGRSAQTSAPQVNKVTKPLVTVTDQ SNVVKRDAQPPATAKSATAGGTTNSWTNVHRSVSPNVQSQPTGLKKSWHQLFSRSASVSP CPDVPATAREMNGQPEPYGAQISNAQIFLSQYPPLDSNPSSSRCMQFPGFPPVNGAPANM SLSHFPAGHMPYYCEPEPTVFEEPEQFEDPCYDPDAIALLGPVSESLDNFPLDLDSGFIS SDITKETHAKPSPIESPLSRSRTFEDNPIRHSTGKGPNGSILPEASNEHGGTWQMWGTPL VQESLGLRGPQTEWLLPNTNQFNHGASHLNGGTRSSVGSGLDDNDLWLQKAPFQQMPLDT RSLFLSHDVSENAIHNDLDFGSPNKSARLHPIGPPGHSWSKEAVVLNGPQEASKICSPTG AHVGGGFFSTNPDVQSVWSFNQKETT

Transcript Sequence

Transcript ID	Os12t0112600-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:12:645370:651356:1 gene:Os12g0112600 gene_biotype:protein_coding transcript_biotype:protein_coding description:ATPase, F1/V1/A1 complex, alpha/beta subunit, nucleotide-binding domain containing protein. (Os12t0112600-01)
Sequence	GAGGGGAAGGCAATCCGAAAGGAAATTAGGCTAGGGTTTTCGCCATGGCTACCACCCACC ACCTCGAGCTCCCCCTCTCCATTCCCAATCTCTCCGACTCCTCCTAATTAATCCCGTATT CCCACCCCCCAAGCCAAGGACAGCATCTCGCATCCGCGTCCTTCAATTGATTTGATTGGG TTCCCCCCCTCCATTTCAGGGTTTCGTTTCGCATCGCAGCAATCTTCCCGACCCAGCAAG CTTCTTCTTCCCTTGGGTCCGTTAGGGTTTGAGATTGAGAGGGGCGGCGCTGGCGATCGA GATTGGTACGGCGGCGGAGGCGGAGGTGGGCGGATAATGTGTATACTGTGCGCCGTGCAA CGGTGGTCGCGGCGCGTCGCCACCATGCTGCCATGGCTGGTGCTCCCGCTCATCCTCCTC TGGGCGCTCTCCCAGCTCCTCCCCGCCGCCTACCGCTTCGAGGTCACCTCCCCTCGCCTC GCCTGCGTCTCCGTCCTCCTCCTCACCCTCTTCTGGTACGAGATCCTCCTCCCCCGCCTC TCCCTCTGGCGCGCCCGCCGCTCCGCCCGCCTCCGCGAGGAGCGCCGCGCCCACGCCCTC CAGCTCCACAAGCTCCGCAAGACCGCCACCCGCCGCTGCCGCAACTGCAACAACCCCTAC CGCGACCAGAACCCCGGCGGCGGCAAGTTCATGTGCTCCTACTGCGGCCATGTCTCCAAG CGCCCCGTCCTCGACCTCGGCCCTGCCGGGACCCTCCCCACCGGCTGGCCCTGCACCCAG GATTGGCCAAATGCTGCCGGTGACCCTGCCTACTGGCTCGACCTCCGCTGCTCCTCCGAT AACCTGTACTCGGGGTTCTCGTGGCGCTTGTTCTCTTCCTTCTGCGTCAGCATGAGGTGG TTCTGGAGGGAAGTGCTCAGATTTGGCTCCTCGGGGGACGGCGATGGCTTGGGCCGAGAT GGTAAAAGATTAGCAAAAGAAGGGGAGAACGGAGCAAAGGCTGAGGAGAGCAGAGTCGAG AAGGCGAAAAGGAAGGCGGAGGAGAAGAGGTTGGCGAGGCTGGAGAAGGAAATGCTAGAG GAGGAGGAACGCAAGCAACGGGAGGAGATGGCAAAGCTCGTGGAGGAGCGGAGGAGGCTA AGGGATGAGAAAGCAGAGGCTGAAGAGAGATCCAAAGGCGCCACACCTGTTGGGGAGAAG GATCCTCGGAAGGAAGTGGAACGTAGACGGCAGGAGAGGAGGAGGAAGGACGAGAAGGAT AAGGGATCAAGCAAGAGCAATTCAGATTGCGAGGATATCGAGAGAAGAGTAACCAGGGAA GGGGAGAGAAAGCGGGATTCTGATAGAAGAAATGAGCCAGAGAAGCGGGATGCAACAAGA GTTGGCGCTGAGGGTCATAAGCCCTATAATTTTGATGCTAACAACCAGGGTAGTAAGACA GTACAGAGCAAGGCAAAGTACTTTGGCCGTATGACAGGCGGTCTGTTATCTTCTTCAAGA GGTTTTGGTGGCGGTTCCTTTTTTGGTAGAAGTGCTCAGACCTCTGCTCCTCAAGTTAAC AAGGTGACTAAACCGCTTGTTACTGTAACTGACCAGAGTAACGTAGTCAAAAGAGATGCC CAACCTCCTGCAACAGCCAAATCTGCTACTGCTGGAGGAACGACAAATTCATGGACTAAT GTTCATCGATCTGTTAGTCCAAATGTGCAGTCACAGCCTACTGGACTTAAAAAGTCATGG CACCAGCTGTTTAGTCGCTCAGCATCTGTGTCACCTTGTCCTGATGTTCCTGCTACAGCC CGTGAAATGAACGGGCAACCAGAACCATATGGAGCACAAATTAGCAATGCTCAAATCTTC CTATCGCAGTATCCCCCTCTGGACAGTAACCCTAGTTCAAGCCGCTGTATGCAATTTCCA GGTTTCCCACCAGTGAATGGAGCACCTGCCAACATGTCACTCTCTCATTTTCCAGCTGGA CATATGCCCTACTATTGTGAGCCAGAACCAACAGTGTTTGAAGAACCAGAACAATTTGAG GACCCATGCTATGATCCTGATGCAATTGCGTTGCTTGGGCCAGTTTCAGAGTCCCTAGAT AACTTTCCTCTCGACTTGGATAGCGGGTTCATCTCTAGTGACATCACCAAGGAAACACAT GCGAAGCCTTCACCAATCGAATCTCCTCTTTCAAGATCACGTACATTCGAGGATAATCCT ATTAGGCACTCAACTGGAAAAGGGCCTAATGGTTCTATTTTGCCTGAAGCTAGCAATGAA CATGGGGGCACATGGCAAATGTGGGGCACGCCATTAGTTCAAGAAAGTTTAGGTCTACGA GGTCCTCAGACTGAGTGGCTCCTACCAAACACAAATCAATTTAACCATGGTGCCAGTCAT TTGAATGGTGGAACAAGAAGCTCAGTGGGTTCTGGTTTGGATGACAATGATTTATGGCTG CAGAAAGCGCCTTTCCAGCAAATGCCTCTTGATACAAGGAGTCTGTTCCTTTCACATGAT GTCTCAGAGAATGCTATACACAACGATTTGGATTTTGGATCACCAAACAAATCAGCCCGT TTGCACCCCATTGGGCCACCTGGTCATTCTTGGTCCAAGGAGGCAGTGGTGCTGAATGGA CCTCAGGAAGCTAGTAAGATTTGCTCACCAACAGGGGCACATGTTGGTGGTGGCTTTTTT TCAACTAATCCTGATGTACAGTCAGTTTGGTCGTTCAATCAAAAAGAGACAACATAGAAC ATATAAAACACAATGTCAAGCCAATGCTTCCTTGCCTCATTTGAGTTTAGGAAGTTGAGG TGATATGTTGGACTGTATTCCTTGGACGTGAATGATAGTTCCCTTTTATTTAGTATCACT TACCTGTTAACATGCGTTAGCATTAGGTCTCTCACCTGATGTTTTGGCGCATTTAACCTT TTTTTTGGATTCAATGCAAAATGGGCTGGGAACTCATGGTGCACAATCACTTGCTTGCTC AGATGCTCTTATTGATGTGGTGACTAGTGAAATCATAGTTCAGTCAATTGTCCAGCACTT CACTGGATTCCCTAGTTTGCCCTGTGGTTGAACTGGTTAGTTCCAGTGTGACCTTTGCTT TCAGTCTGCTGAGAGGTGTGGAGAGAAGATAATGAAGGAATGGTCGTGGAGCAAGTGCTG TTCCC