Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os12t0112500-01
CDS Infomation	cds chromosome:IRGSP-1.0:12:639913:646681:-1 gene:Os12g0112500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Protein phosphatase 124 description:Protein-tyrosine phosphatase, dual specificity domain containing protein. (Os12t0112500-01)
Sequence	ATGGCCGCCATGGCCACCGCCCCGTGTTTTCCGGCCACCCCGGGACTCCCAGCGCGCGGC GCCGTCGCTGCTAGGAGCAGGATGGCCGCCGGAGGAAGCAGGAGCCAACGGCGGCGGAGT TCCTCTGGGGTTTTCCTGTGCCGCTCCTCCACGACGGGGAGCACTAGGATGGAGGACTAC AACACCGCCATGAAGAGAATGATGCGCAATCCCTACGAATACCACCATGATTTAGGTATG AATTATGCTATCATTAGTGATAGCTTGATTGTTGGCTCGCAACCTCAAAAACCAGAAGAT ATTGATCACTTAAAAGATGAGGAGAAAGTAGCCTTTATTCTTTGCTTACAGCAGGACAAG GACATTGAATATTGGGGCATTGATTTCCAAACTGTTGTCAATAGGTGCAAAGAACTTGGC ATAAAACACATCAGAAGACCGGCAGTGGACTTCGATCCAGATTCGTTGAGGACTCAATTG CCCAAAGCAGTCGCATCACTAGAATGGGCTATATCGGAAGGCAAAGGGCGTGTCTATGTC CATTGCACTGCTGGACTTGGGAGAGCACCTGCAGTTGCAATTGCTTACATGTTTTGGTTC GAGAATATGAATCTTAAGACAGCTTATGAGAAACTAACTTCTAAAAGGCCCTGTGGACCC AATAAGAGAGCGATCCGTGCTGCAACTTATGATCTTGCTAAGAATGATCCACATAAAGAG TCTTTTGACAGTCTGCCAGAGCATGCTTTTGAGGGCATTGCTGACTCGGAGAGGAGGTTA ATTCAAGAACGGGTCCGTGCTCTTCGGGAGGCTTGA

Peptide Sequence

PEP ID	Os12t0112500-01
PEP Infomation	pep chromosome:IRGSP-1.0:12:639913:646681:-1 gene:Os12g0112500 transcript:Os12t0112500-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Protein phosphatase 124 description:Protein-tyrosine phosphatase, dual specificity domain containing protein. (Os12t0112500-01)
Sequence	MAAMATAPCFPATPGLPARGAVAARSRMAAGGSRSQRRRSSSGVFLCRSSTTGSTRMEDY NTAMKRMMRNPYEYHHDLGMNYAIISDSLIVGSQPQKPEDIDHLKDEEKVAFILCLQQDK DIEYWGIDFQTVVNRCKELGIKHIRRPAVDFDPDSLRTQLPKAVASLEWAISEGKGRVYV HCTAGLGRAPAVAIAYMFWFENMNLKTAYEKLTSKRPCGPNKRAIRAATYDLAKNDPHKE SFDSLPEHAFEGIADSERRLIQERVRALREA

Transcript Sequence

Transcript ID	Os12t0112500-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:12:639913:646681:-1 gene:Os12g0112500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Protein phosphatase 124 description:Protein-tyrosine phosphatase, dual specificity domain containing protein. (Os12t0112500-01)
Sequence	TTACTCTTCTCTCGATATCCTCGCAATCTGAATTGCTCTTGCTTGATCCCTTATCCTTCT CGTCCTTCCTCCTCCTCTCCTGCCGTCTACGTTCCACTTCCTTCCGAGGATCCTTCTCCC CAACAGAGCTTCCTTTTTTAAGAGATCAAGAAAAGAATGGTGAAGTATTGTAGTTCTCCC TATGTGTATAACTAAAAATACCTACGTGATTAATAAGACGAGTGTGCATCGTCCCAAGTC GCCGGGATCCAGAAGCCGCGCCAAATCCGCCGGGAATCCCACCACCACCACCACCACCAC CGGCCGGTCTCCTTTCTGCTTGCCTCGCTCGCATCGTCGCATTGCCACATCCACATCCTG CAAACATGGCCGCCATGGCCACCGCCCCGTGTTTTCCGGCCACCCCGGGACTCCCAGCGC GCGGCGCCGTCGCTGCTAGGAGCAGGATGGCCGCCGGAGGAAGCAGGAGCCAACGGCGGC GGAGTTCCTCTGGGGTTTTCCTGTGCCGCTCCTCCACGACGGGGAGCACTAGGATGGAGG ACTACAACACCGCCATGAAGAGAATGATGCGCAATCCCTACGAATACCACCATGATTTAG GTATGAATTATGCTATCATTAGTGATAGCTTGATTGTTGGCTCGCAACCTCAAAAACCAG AAGATATTGATCACTTAAAAGATGAGGAGAAAGTAGCCTTTATTCTTTGCTTACAGCAGG ACAAGGACATTGAATATTGGGGCATTGATTTCCAAACTGTTGTCAATAGGTGCAAAGAAC TTGGCATAAAACACATCAGAAGACCGGCAGTGGACTTCGATCCAGATTCGTTGAGGACTC AATTGCCCAAAGCAGTCGCATCACTAGAATGGGCTATATCGGAAGGCAAAGGGCGTGTCT ATGTCCATTGCACTGCTGGACTTGGGAGAGCACCTGCAGTTGCAATTGCTTACATGTTTT GGTTCGAGAATATGAATCTTAAGACAGCTTATGAGAAACTAACTTCTAAAAGGCCCTGTG GACCCAATAAGAGAGCGATCCGTGCTGCAACTTATGATCTTGCTAAGAATGATCCACATA AAGAGTCTTTTGACAGTCTGCCAGAGCATGCTTTTGAGGGCATTGCTGACTCGGAGAGGA GGTTAATTCAAGAACGGGTCCGTGCTCTTCGGGAGGCTTGAGAAGTAAATGAAAACTTCT CCATATCCTTCTATTCAAGCCTACAGGTCAGGAAATGCAGTAAACATATGATAGAACTAA ATAAACAAATCTGCGCAAATTGAATTCATTATGGAACAGACAACAGCAGAACCTTAGCTC CTCTAGTAGTATTCTTCTTTGCTGCCAGATTGCTAGCTGGTGCAGATGAAAAGGTTTTGA TTCACCTATCCTCAGAATAAAGCTCAGACAAGATCTAATTTAGTAGGTATCTGATAATAA TAAGAATGACAAAATAAGGAGGTGCCAGAAGATGGCATTGCTGGTCTGGATGATCTTGGT TCTTGGTTGCAATTGCGTAGTCTTAATGGCGACCAGTTGTGTAATTGGGAAACCCACACG CACATAGTGCCTTGTAAATTCAGAGTATCGAATAAGGCCGTCTTGAGACTGTCACTTTGC TCATGTGTACGGCTATTGCTGTTGAAAGTGAAACACATACTATTGCTGAAAGTGAAAATT CATCATATC