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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os12t0112401-00
CDS Infomation

cds chromosome:IRGSP-1.0:12:638380:639712:1 gene:Os12g0112401 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to RNA-binding protein 12. (Os12t0112401-00)
Sequence

ATGATGGCGTCACCGGCATCCAAGCGCGCCGCCGTCGTCTTGCTCGTCGTGGTTGCTTCT
GTGATGATGGCGACGCCGTCGGAAGCGATGAGACCGAGGAGGAAGGCAGCCGCCGCCTTG
GTCTCGTCGGAGGCCCGCGTCCTCCGCTTCCCCGGCTTCCCGGGAAGCCGCCAGCGCTTC
CCGGGGTTCCCCGGAGCCAGGCCGTCGCCGCGCGCGGCGCCGCCGAAGCCATCACCGCCG
CCGTCGTCGTCGTCAGTCCCCGCCCTGCCACTGTCTCCACCCGCCGGCGGCTCGCTGCCG
CCGCCGTGCGGGAGGTCGTCGCAGACGACGCCGCCGGGCACCTTGATCCCGGGCATGCCG
GGCAGCGGCGGCGGCGGTTCGTCGCCGACGGACTGCGTGACGTCGCTGGCGGGGCTGACG
ACGTGCGCGTCGTTCCTGACGGGGGCGGAGGCGGAGACCCCGACGCCGGCGAGCGAGTGC
TGCGGCGGGCTGGGGATGTTCCTGAACAGCACGGCGGCGGCGGCGGAGGGTGACCGGACG
TTGAGGTGCCTGTGCCCGGTGATCCTCGGCGACGTCAACCGGATGCTGCCCAAGCCGGTG
GATCCCGTGCGGATGATGTACCTCCCCATCGCCTGCGGCCTCGTCCTCCCGCCTCAAGTC
CTCTTCATCTGCTTCACCGGGCAGCCTAACCCACCGGTGCTCTCGCGTGTTCCTGTCTCC
TGGTCGACGCTCTCTTCAGCAATGTCGCCTTGA

Peptide Sequence

PEP ID

Os12t0112401-00
PEP Infomation

pep chromosome:IRGSP-1.0:12:638380:639712:1 gene:Os12g0112401 transcript:Os12t0112401-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to RNA-binding protein 12. (Os12t0112401-00)
Sequence

MMASPASKRAAVVLLVVVASVMMATPSEAMRPRRKAAAALVSSEARVLRFPGFPGSRQRF
PGFPGARPSPRAAPPKPSPPPSSSSVPALPLSPPAGGSLPPPCGRSSQTTPPGTLIPGMP
GSGGGGSSPTDCVTSLAGLTTCASFLTGAEAETPTPASECCGGLGMFLNSTAAAAEGDRT
LRCLCPVILGDVNRMLPKPVDPVRMMYLPIACGLVLPPQVLFICFTGQPNPPVLSRVPVS
WSTLSSAMSP

Transcript Sequence

Transcript ID

Os12t0112401-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:12:638380:639712:1 gene:Os12g0112401 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to RNA-binding protein 12. (Os12t0112401-00)
Sequence

CAAGCTGCGAGCCTCTCGTGCTTAATACTAGTCACTAATTAAGTGCTTAAGCTAGTGCTT
AACACTAGCTAGCTAATTGCTCATCATTGATCAAGCGAAGAAGAAGATGATGGCGTCACC
GGCATCCAAGCGCGCCGCCGTCGTCTTGCTCGTCGTGGTTGCTTCTGTGATGATGGCGAC
GCCGTCGGAAGCGATGAGACCGAGGAGGAAGGCAGCCGCCGCCTTGGTCTCGTCGGAGGC
CCGCGTCCTCCGCTTCCCCGGCTTCCCGGGAAGCCGCCAGCGCTTCCCGGGGTTCCCCGG
AGCCAGGCCGTCGCCGCGCGCGGCGCCGCCGAAGCCATCACCGCCGCCGTCGTCGTCGTC
AGTCCCCGCCCTGCCACTGTCTCCACCCGCCGGCGGCTCGCTGCCGCCGCCGTGCGGGAG
GTCGTCGCAGACGACGCCGCCGGGCACCTTGATCCCGGGCATGCCGGGCAGCGGCGGCGG
CGGTTCGTCGCCGACGGACTGCGTGACGTCGCTGGCGGGGCTGACGACGTGCGCGTCGTT
CCTGACGGGGGCGGAGGCGGAGACCCCGACGCCGGCGAGCGAGTGCTGCGGCGGGCTGGG
GATGTTCCTGAACAGCACGGCGGCGGCGGCGGAGGGTGACCGGACGTTGAGGTGCCTGTG
CCCGGTGATCCTCGGCGACGTCAACCGGATGCTGCCCAAGCCGGTGGATCCCGTGCGGAT
GATGTACCTCCCCATCGCCTGCGGCCTCGTCCTCCCGCCTCAAGTCCTCTTCATCTGCTT
CACCGGGCAGCCTAACCCACCGGTGCTCTCGCGTGTTCCTGTCTCCTGGTCGACGCTCTC
TTCAGCAATGTCGCCTTGATGGTTCACGATAAGATCGATTCAAAGGTTACTGATGATTCA
GTGTCTCACTTTAAGCTTACAAAGCTGTTGTTGGTCTTGAGTGTTGTGTTTTCAGAAACA
GCTGAGCCTGTACTTCAGTAAACCACAGAGTTAGCTACCATACTGCTATATAACCACATA
AGATTGGTTGGTACATCATGCGTGGTGTAAGAGCTTATTTCTTATTTATAGGGAAAAAAT
ATGTAAGTCATTTCATCAAATATTCTTTCTCC