Gene sequences

How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only)

Other Tools

Data List

All

Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os12t0112200-01
CDS Infomation	cds chromosome:IRGSP-1.0:12:628418:630963:1 gene:Os12g0112200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Saposin-like domain containing protein. (Os12t0112200-01)
Sequence	ATGGATTTCAAAGTCGCTTCCTTTCTCCTACTCCTGTTAATCGTCACCTGCGGAGCTGCT CAAGGTCAAGGCAATGATTTTGTTGTCCTTGATCTAAAAACAACTGAGGTCGGGGAAGAT GCTAGCCCAATGTACAAGGAGCAAATTGCGTTGACCAAGATACCTGTAACTCTTCTGAGG AGCAAGCACAGCTCACTGTGCTCGGCTTGTGAAAACATCACAAGCGAAGCAGTCAACTTT CTTAGTGAGAAACAAATACAAGATAAGATAATGACTATCCTTCATGACACTTGTTCTCAG ACATTCTCCTTTGAGCAAAAGTGTCTTGAGACTATGGACTCCTATGCAACTCTCGTCTTT GCAAAAATTGCTGAGATTAAGCCAGATGAGTTCTGCAAACAGTATGGCCTCTGCAGGGAC ATGGCTCTTTTATCAGCTATGAAAAGTGAAAGCACATGCGTATTCTGCCACCACATCATC GATGAAATTATGTCCAAACTGAAAGATCCTGATGCAGAGTTTGAGATCATTCAATTACTA CTCAAGGAATGCAACAAGATTGAAGGTCATCAGCAGCAGTGCAAGAGGATGGTTCTGCAG TACGTCCCTCTGGTTCTAGTGAACGGTGAGAAGTTCCTGGAGAAGAACGATGTGTGCGCA ATGATCCAAGCCTGTGATGCAGGCAAGAGGAAGGCATTCAACTTGTTCTCTGCACGGAAA TTGGTGCGTGACGCATGA

Peptide Sequence

PEP ID	Os12t0112200-01
PEP Infomation	pep chromosome:IRGSP-1.0:12:628418:630963:1 gene:Os12g0112200 transcript:Os12t0112200-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Saposin-like domain containing protein. (Os12t0112200-01)
Sequence	MDFKVASFLLLLLIVTCGAAQGQGNDFVVLDLKTTEVGEDASPMYKEQIALTKIPVTLLR SKHSSLCSACENITSEAVNFLSEKQIQDKIMTILHDTCSQTFSFEQKCLETMDSYATLVF AKIAEIKPDEFCKQYGLCRDMALLSAMKSESTCVFCHHIIDEIMSKLKDPDAEFEIIQLL LKECNKIEGHQQQCKRMVLQYVPLVLVNGEKFLEKNDVCAMIQACDAGKRKAFNLFSARK LVRDA

Transcript Sequence

Transcript ID	Os12t0112200-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:12:628418:630963:1 gene:Os12g0112200 gene_biotype:protein_coding transcript_biotype:protein_coding description:Saposin-like domain containing protein. (Os12t0112200-01)
Sequence	ATTACAATCGATCCTGCAAGAGAAGCACTCTATAATTGCAGCGGCAAGATCGATTTTTTA CAAACCAACAAAGCAGAAAGGATTCACGCGCCGCCGCTTGCGATTTGTCAATTGCAGCCA GAAAGAGGCGATGGATTTCAAAGTCGCTTCCTTTCTCCTACTCCTGTTAATCGTCACCTG CGGAGCTGCTCAAGGTCAAGGCAATGATTTTGTTGTCCTTGATCTAAAAACAACTGAGGT CGGGGAAGATGCTAGCCCAATGTACAAGGAGCAAATTGCGTTGACCAAGATACCTGTAAC TCTTCTGAGGAGCAAGCACAGCTCACTGTGCTCGGCTTGTGAAAACATCACAAGCGAAGC AGTCAACTTTCTTAGTGAGAAACAAATACAAGATAAGATAATGACTATCCTTCATGACAC TTGTTCTCAGACATTCTCCTTTGAGCAAAAGTGTCTTGAGACTATGGACTCCTATGCAAC TCTCGTCTTTGCAAAAATTGCTGAGATTAAGCCAGATGAGTTCTGCAAACAGTATGGCCT CTGCAGGGACATGGCTCTTTTATCAGCTATGAAAAGTGAAAGCACATGCGTATTCTGCCA CCACATCATCGATGAAATTATGTCCAAACTGAAAGATCCTGATGCAGAGTTTGAGATCAT TCAATTACTACTCAAGGAATGCAACAAGATTGAAGGTCATCAGCAGCAGTGCAAGAGGAT GGTTCTGCAGTACGTCCCTCTGGTTCTAGTGAACGGTGAGAAGTTCCTGGAGAAGAACGA TGTGTGCGCAATGATCCAAGCCTGTGATGCAGGCAAGAGGAAGGCATTCAACTTGTTCTC TGCACGGAAATTGGTGCGTGACGCATGAAGTAGTAGGAAGCGTGCATACACGAATCAAGT TGTGGTAGGCATGGAGAAGACGAAGAAGTGATGGCAGCTTGTACATATGGTTGTTATTAA TGATATAGGCAATACTACTCTGTGAAGGGGATAATCCGATAATTGTATGCACACATTTGA ACTGTTTGTCTGATAGTAATGGCTATACTTACTTTTGTGTGCTTGCTTCTGGGGAGT