Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os12t0111600-01
CDS Infomation

cds chromosome:IRGSP-1.0:12:607455:608215:-1 gene:Os12g0111600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Hypoxia-Induced Gene Domain 5, Hypoxia-Induced Gene Domain Protein 5 description:Hypoxia induced protein conserved region family protein. (Os12t0111600-01)
Sequence

ATGGAGCGGCTGAGCTCATCGGTGCAGTCGTGGGTGGAGGAACACAAGCTCGCCAGCATC
GGAGGGCTGTGGGCGACGGCGGTGGGCGCATCGGTGGCGTACGGGCGGAGGAAGACGCCG
CAGATGCGGCTGATCCACGCCAGGCTTCACGCGCAGGCCCTCACCCTCGCCGTCCTCGGC
GGCGCCGCCCTCGCGCACCACTACTACAACCCATCATCCAAGACCAACAACAGCAGCAGC
TTGGACTACGACTTCTACTCGCAGCTGCCGCCGGCCACCACCGACGACGGGCAGGAGAAC
GAGAGGTGGAGCTGGTAG

Peptide Sequence

PEP ID

Os12t0111600-01
PEP Infomation

pep chromosome:IRGSP-1.0:12:607455:608215:-1 gene:Os12g0111600 transcript:Os12t0111600-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Hypoxia-Induced Gene Domain 5, Hypoxia-Induced Gene Domain Protein 5 description:Hypoxia induced protein conserved region family protein. (Os12t0111600-01)
Sequence

MERLSSSVQSWVEEHKLASIGGLWATAVGASVAYGRRKTPQMRLIHARLHAQALTLAVLG
GAALAHHYYNPSSKTNNSSSLDYDFYSQLPPATTDDGQENERWSW

Transcript Sequence

Transcript ID

Os12t0111600-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:12:607455:608215:-1 gene:Os12g0111600 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:Hypoxia-Induced Gene Domain 5, Hypoxia-Induced Gene Domain Protein 5 description:Hypoxia induced protein conserved region family protein. (Os12t0111600-01)
Sequence

ATCACTGTCTCTCACTCTCACTCCCAAATCACATCCTCAAATTCAGATTCAGAGTCGTCG
AAATCAGTAGTATTCATCAGGAATGGAGCGGCTGAGCTCATCGGTGCAGTCGTGGGTGGA
GGAACACAAGCTCGCCAGCATCGGAGGGCTGTGGGCGACGGCGGTGGGCGCATCGGTGGC
GTACGGGCGGAGGAAGACGCCGCAGATGCGGCTGATCCACGCCAGGCTTCACGCGCAGGC
CCTCACCCTCGCCGTCCTCGGCGGCGCCGCCCTCGCGCACCACTACTACAACCCATCATC
CAAGACCAACAACAGCAGCAGCTTGGACTACGACTTCTACTCGCAGCTGCCGCCGGCCAC
CACCGACGACGGGCAGGAGAACGAGAGGTGGAGCTGGTAGTGCTACCCTTCCTTCCTGCT
GCAAGATGCAGACAAATGAAGATGATGACGATCACGATGATCAATTAGTAATAATCTAAT
CGGCTCCATTAGTTAATTTTATCTTTATCTTAATAATAGAGTATGTCCTCCTAATCTATC
CAGCTAGGATGGTCTTATCCACTCCATCCCATCCTCTGCTCTGTACTATGCATGTAATTA
TCCATTCCATCCGGACCCTGCTGTTCCGATGCCTTGATTACAATTGATGTCAGTGCAGTG
GTATGCTT