Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os12t0110300-01
CDS Infomation

cds chromosome:IRGSP-1.0:12:559283:562829:-1 gene:Os12g0110300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to cDNA, clone: J065191E12, full insert sequence. (Os12t0110300-01)
Sequence

ATGGCGGCCGCGACGGAGGCTGCCTCCACCTCGGAGGCGGAGGCTGAGGGGAGGGGCAAA
CCCATCGTCGTCCGTGTCAAGCGCAAGCCCTCCCAGACCCGCCCCGACGCTTTCTGGCTA
GAGATCAATGAGAGGCCGGTGAAGAAGGCTATGCTCGATTTCTCCAGCCTTTCAGTCTCC
GATCCATCCTCTGCTCCTAATAAAGCTTCAGAGGAACCACGGGTTAAGAAACTTCTGGTA
CAGCACATTGAGACAGTACACCATTCTGAGGCAGTTCAGGATGTTTTGCACTCTCTTCTG
CATTCTGACTTGGATGCCAAAGAGATAAAGAGCAAGACAAAGGAATGGAACAACAGAACT
AAGCAAGATAAAAAACAAGACCAGCTACGGTCAGCAGCCAGACAGAGGCATGAGGATCTT
GGAAGAAATGCTCGCTTTGCGCAAATTTGGAGGAGTCGGAAAGGAGACAGGAATGAAGTT
GATGAATCACTACGAGAAATATGCCATCTTTATGATGCTGTCCAAGTAGATTCTGATGAA
GAGAAGCATCCCACAGAACCAAGGATTACGTCTTTTGAAGAGGGCGCAATTTTATGCAAT
TTTCTTCCACTTATACGGGAACATTTGCCGTCAGCTGCTGAAGAAATTGAATCAGATATT
ATTTCGCTGGCACAATCGGAAGATTCAGATGTTTATGACATATATACTGTCACGGAGGTG
GATGATGATACAACAATGGAGGGCACATCTTCAGCTCCATACCCACTATTACAAGTGGAC
AATGACGATGATGTATGTTATGATGATGACGATCCTTATGGTACAGATGATTCAAATGCG
GAGGATAACCCATTATATGATTATCCTGAAGAGTTGTCAGAGGATGAGGATGATGATTCC
AATAGCGAGAATCCATTTTCAGAGCTAGACGGTTCTGATCCCGAGTATGAGAAGGAAGAG
GTGGAGGAAGAAAGGGATGAAGACGGGAGATAG

Peptide Sequence

PEP ID

Os12t0110300-01
PEP Infomation

pep chromosome:IRGSP-1.0:12:559283:562829:-1 gene:Os12g0110300 transcript:Os12t0110300-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to cDNA, clone: J065191E12, full insert sequence. (Os12t0110300-01)
Sequence

MAAATEAASTSEAEAEGRGKPIVVRVKRKPSQTRPDAFWLEINERPVKKAMLDFSSLSVS
DPSSAPNKASEEPRVKKLLVQHIETVHHSEAVQDVLHSLLHSDLDAKEIKSKTKEWNNRT
KQDKKQDQLRSAARQRHEDLGRNARFAQIWRSRKGDRNEVDESLREICHLYDAVQVDSDE
EKHPTEPRITSFEEGAILCNFLPLIREHLPSAAEEIESDIISLAQSEDSDVYDIYTVTEV
DDDTTMEGTSSAPYPLLQVDNDDDVCYDDDDPYGTDDSNAEDNPLYDYPEELSEDEDDDS
NSENPFSELDGSDPEYEKEEVEEERDEDGR

Transcript Sequence

Transcript ID

Os12t0110300-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:12:559283:562829:-1 gene:Os12g0110300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to cDNA, clone: J065191E12, full insert sequence. (Os12t0110300-01)
Sequence

AAAGCACCCAACTTGTTCTCGTTTGTTCTGACGGCGAGAGAACCAACCAACCCTACCTTG
GCTTTGCCGGCGGGCGGCGGCGATGGCGGCCGCGACGGAGGCTGCCTCCACCTCGGAGGC
GGAGGCTGAGGGGAGGGGCAAACCCATCGTCGTCCGTGTCAAGCGCAAGCCCTCCCAGAC
CCGCCCCGACGCTTTCTGGCTAGAGATCAATGAGAGGCCGGTGAAGAAGGCTATGCTCGA
TTTCTCCAGCCTTTCAGTCTCCGATCCATCCTCTGCTCCTAATAAAGCTTCAGAGGAACC
ACGGGTTAAGAAACTTCTGGTACAGCACATTGAGACAGTACACCATTCTGAGGCAGTTCA
GGATGTTTTGCACTCTCTTCTGCATTCTGACTTGGATGCCAAAGAGATAAAGAGCAAGAC
AAAGGAATGGAACAACAGAACTAAGCAAGATAAAAAACAAGACCAGCTACGGTCAGCAGC
CAGACAGAGGCATGAGGATCTTGGAAGAAATGCTCGCTTTGCGCAAATTTGGAGGAGTCG
GAAAGGAGACAGGAATGAAGTTGATGAATCACTACGAGAAATATGCCATCTTTATGATGC
TGTCCAAGTAGATTCTGATGAAGAGAAGCATCCCACAGAACCAAGGATTACGTCTTTTGA
AGAGGGCGCAATTTTATGCAATTTTCTTCCACTTATACGGGAACATTTGCCGTCAGCTGC
TGAAGAAATTGAATCAGATATTATTTCGCTGGCACAATCGGAAGATTCAGATGTTTATGA
CATATATACTGTCACGGAGGTGGATGATGATACAACAATGGAGGGCACATCTTCAGCTCC
ATACCCACTATTACAAGTGGACAATGACGATGATGTATGTTATGATGATGACGATCCTTA
TGGTACAGATGATTCAAATGCGGAGGATAACCCATTATATGATTATCCTGAAGAGTTGTC
AGAGGATGAGGATGATGATTCCAATAGCGAGAATCCATTTTCAGAGCTAGACGGTTCTGA
TCCCGAGTATGAGAAGGAAGAGGTGGAGGAAGAAAGGGATGAAGACGGGAGATAGAATCT
ATGCTCGGGGTACAAATATGGGTAGTAACTAGAGATAAGATGATGTATGGGCTAGCGCTT
GAGCTGGCTGTGATGTTTCCTGTTGGGCTGGCTATATGTGAGAGAACTTTTGGTGTTAGT
ATGCTGATGAATTGTATTCCCAGCCTCAGCTGTTAGACCTGTAACTCGATATGATCACTG
AAGGAGAAGTGTAGGAGTAAGAAGAATGAATTATTAAGGCCGAGTTTAGTTCC