Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os12t0109900-02
CDS Infomation	cds chromosome:IRGSP-1.0:12:537602:540332:-1 gene:Os12g0109900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:dsRNA binding protein RBP, RNA binding protein description:Double-stranded RNA-binding-like domain containing protein. (Os12t0109900-01);Similar to DsRNA-binding protein ODB1. (Os12t0109900-02)
Sequence	ATGGACATGCCGCCCACGCCCCTTCCGCCGGAGACCGCCAACACCTCGCCCGCTCCCAAC GGCGCCACCGCCGGAATCCGGGTTGAGAACTGCTACGTCTTCAAGAGCCGGCTGCAAGAG TATGCACAGAAAACCGGCCTCCAGACTCCAGAGTATCATACCTTCAAGGAGGGACCTTCC CACGAGCCTGTCTTCAAGTCCACAGTGGTGATTAATAATACCAGCTATGACTCCCTGCCC GGATTCTTCAACAGAAAGGCTGCAGAACAGTCTGCTGCTGAAGTTGCCCTCATGGAAATT GTCAAGTCCATACCAGCCAACGCAAATATCCCAGCTGTTCAAGAGACTGGCCTGTGCAAC ACAGGAAGTCAGCAACTGAACCTGAGGGAAATGCACCACCACCTTCTGGCAACCCTTGCA CGCCACCGCCGTCTTGCTGCCGCTGCCACCCTCTTCTCCTCCACCCTCCGCACTGCTCGT GCCCTCAACTCCCTCCTCGCTGCTATCTGCTCTTCCCCAGCGTTCCTCCGCTTTGCCCCT AAAGTCCTCCTGCTCGCTGCCCCATCAGTCTCCCCTGATGCCACCACCTTCCACATCCTC ACCTCCACACTCTGCCAGGCCCACCGCCCCGCTGCTGCCGCCGACCTCCTTTGCTGCATG CCCTCGCTTCTCCTTGACCCTGACCCGGCCAGTTGTCGTGCTGTCCTTTCCTCCCTGTGC CAGTACGCTTCCGCTCAGGATGCAGTAGCATTCTTGGACAAGATGTGCCATTGGGGCATT TCCCCAAGCAGATCTGACTACCACGCCGTCTTCGAAGCGCTTCTGCAGGAGGGAAAGGTA GTGGAGGCATATGAGGTCATGAAGAATAAGATGGGCTCTAACAGGGTGGCACCTGCACTT GCATACTTCAAATTGACAATGCAAGCTTTCAGCAAGTGCTTGGAGTTTGATTCTGTGGAG GAGGTGTTTGATGAAATGCTCCTGAGAGGGCTGGTGCCAGACGTGGATGTGTACAACGTG TACATTGGCGCGCTATGCAGGAAAGGTGACCTTGCCAGAGCGCGACAGATGATGACCTGC ATGGAGCATGCCGGGTGCCCACCGGATGTAAGGACATTTGGTGTGGTAGTCGCCGGGTGC ATGTCTGCCGGGGACATGGGCACAGTGAGGGAGTTGGTGCAGGAGGCAACAAGGCGTGGC CTGCAGTGGGATCCACCGGCATTGTCGGAGCTGATAGGCTTGCTGCAGGCAGGTGGCGGT GCCACACAGGCACAGGAGTTACTGTTGGAGCCACTATTTGTGCACGATGCACCGGTGTTG GGGCAGCTGATTGGAGCATTGTGCAAGCAAGGGCTATTGGGACCTGCTACTGTAGTAGAT GATTATTAG

Peptide Sequence

PEP ID	Os12t0109900-02
PEP Infomation	pep chromosome:IRGSP-1.0:12:537602:540332:-1 gene:Os12g0109900 transcript:Os12t0109900-02 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:dsRNA binding protein RBP, RNA binding protein description:Double-stranded RNA-binding-like domain containing protein. (Os12t0109900-01);Similar to DsRNA-binding protein ODB1. (Os12t0109900-02)
Sequence	MDMPPTPLPPETANTSPAPNGATAGIRVENCYVFKSRLQEYAQKTGLQTPEYHTFKEGPS HEPVFKSTVVINNTSYDSLPGFFNRKAAEQSAAEVALMEIVKSIPANANIPAVQETGLCN TGSQQLNLREMHHHLLATLARHRRLAAAATLFSSTLRTARALNSLLAAICSSPAFLRFAP KVLLLAAPSVSPDATTFHILTSTLCQAHRPAAAADLLCCMPSLLLDPDPASCRAVLSSLC QYASAQDAVAFLDKMCHWGISPSRSDYHAVFEALLQEGKVVEAYEVMKNKMGSNRVAPAL AYFKLTMQAFSKCLEFDSVEEVFDEMLLRGLVPDVDVYNVYIGALCRKGDLARARQMMTC MEHAGCPPDVRTFGVVVAGCMSAGDMGTVRELVQEATRRGLQWDPPALSELIGLLQAGGG ATQAQELLLEPLFVHDAPVLGQLIGALCKQGLLGPATVVDDY

Transcript Sequence

Transcript ID	Os12t0109900-02
Transcript Infomation	cdna chromosome:IRGSP-1.0:12:537602:540332:-1 gene:Os12g0109900 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:dsRNA binding protein RBP, RNA binding protein description:Double-stranded RNA-binding-like domain containing protein. (Os12t0109900-01);Similar to DsRNA-binding protein ODB1. (Os12t0109900-02)
Sequence	CTCTCTCTCTCGACTCTCGACGACGACGCGGCGGCGGCGGCGGCGAGGTGGGAATGGACA TGCCGCCCACGCCCCTTCCGCCGGAGACCGCCAACACCTCGCCCGCTCCCAACGGCGCCA CCGCCGGAATCCGGGTTGAGAACTGCTACGTCTTCAAGAGCCGGCTGCAAGAGTATGCAC AGAAAACCGGCCTCCAGACTCCAGAGTATCATACCTTCAAGGAGGGACCTTCCCACGAGC CTGTCTTCAAGTCCACAGTGGTGATTAATAATACCAGCTATGACTCCCTGCCCGGATTCT TCAACAGAAAGGCTGCAGAACAGTCTGCTGCTGAAGTTGCCCTCATGGAAATTGTCAAGT CCATACCAGCCAACGCAAATATCCCAGCTGTTCAAGAGACTGGCCTGTGCAACACAGGAA GTCAGCAACTGAACCTGAGGGAAATGCACCACCACCTTCTGGCAACCCTTGCACGCCACC GCCGTCTTGCTGCCGCTGCCACCCTCTTCTCCTCCACCCTCCGCACTGCTCGTGCCCTCA ACTCCCTCCTCGCTGCTATCTGCTCTTCCCCAGCGTTCCTCCGCTTTGCCCCTAAAGTCC TCCTGCTCGCTGCCCCATCAGTCTCCCCTGATGCCACCACCTTCCACATCCTCACCTCCA CACTCTGCCAGGCCCACCGCCCCGCTGCTGCCGCCGACCTCCTTTGCTGCATGCCCTCGC TTCTCCTTGACCCTGACCCGGCCAGTTGTCGTGCTGTCCTTTCCTCCCTGTGCCAGTACG CTTCCGCTCAGGATGCAGTAGCATTCTTGGACAAGATGTGCCATTGGGGCATTTCCCCAA GCAGATCTGACTACCACGCCGTCTTCGAAGCGCTTCTGCAGGAGGGAAAGGTAGTGGAGG CATATGAGGTCATGAAGAATAAGATGGGCTCTAACAGGGTGGCACCTGCACTTGCATACT TCAAATTGACAATGCAAGCTTTCAGCAAGTGCTTGGAGTTTGATTCTGTGGAGGAGGTGT TTGATGAAATGCTCCTGAGAGGGCTGGTGCCAGACGTGGATGTGTACAACGTGTACATTG GCGCGCTATGCAGGAAAGGTGACCTTGCCAGAGCGCGACAGATGATGACCTGCATGGAGC ATGCCGGGTGCCCACCGGATGTAAGGACATTTGGTGTGGTAGTCGCCGGGTGCATGTCTG CCGGGGACATGGGCACAGTGAGGGAGTTGGTGCAGGAGGCAACAAGGCGTGGCCTGCAGT GGGATCCACCGGCATTGTCGGAGCTGATAGGCTTGCTGCAGGCAGGTGGCGGTGCCACAC AGGCACAGGAGTTACTGTTGGAGCCACTATTTGTGCACGATGCACCGGTGTTGGGGCAGC TGATTGGAGCATTGTGCAAGCAAGGGCTATTGGGACCTGCTACTGTAGTAGATGATTATT AGAAAGCATTGTAATGGTCTTTTTGTTTCAAACTTTCACTACAGTTGTTGGTTTTGAATT TTCAAAAATCTGAAGAACGGTATAAGAATTATAAAAACAGAGACAGAAAAGGCAAACCAT GGACTATAACTCCAGGAATACTCGGAGCTTTCGGCTTTGTAGATCACTAGATTGTCGGCT AAAGGTAGGACCCAGTGAGCAAGAAGGGAGGGTATTTGTATAGATGGGCCAGGTAGGAGA TTGCAGAAAGTCTTTATTGTTGTCTTCTGTCATGATTTATTTGTATTTTCTCAAGCTCAC AACTCTACTAAGTT