Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os12t0109300-01
CDS Infomation	cds chromosome:IRGSP-1.0:12:499852:502261:-1 gene:Os12g0109300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os12t0109300-01)
Sequence	GTTCACTCGTTGACTGGCTTTGGCGCTTTATTTATGTCGGGCGATGCCATCAGGCGGCTA CTCCTCGCCGGCGTCGCCCCCAGCAACCGCCCCCCGCCGCTCACCGTCAAGCTCCTCCAC GCCCGCCTCCTCCGCCTCGACCTCCTCGCCGCCCTCTCCCCGCTCCTCCTCCGCGCCCTC TCCTCCTCCGCCCTTCACCTCCACGCGCTCCGCCTCCACTGCCTCCTCCCCAACCCCTCC CACCTCACCTTCCCCATCGCCCTCAAGTCGGCCTCCCGCCTTCCGCACCCTCTCCGCGCG GGCGAGCAGCTCCACGCGCGCTCCCTCAAGCTTCCCTCCCACACCAACCCCCATGTCCTC ACCTCCCTCCTCACCCTCTACGCAAGATGCGGCCTCCTACACCGAGCCCAGAGGGTGTTC GACGAAATGCCACACCCCAGCACCGTCTCCTGGACCGCTCTCATCACTGCCTACATGGAT GCTGGGGACCTCAGGGAAGCCGTCCATGTCGCAAGGAATGCTTTTGCGAATGGTATGCGA CCGGACAGCTTCACGGCCGTGCGTGTCCTGACTGCGTGTGCTCGGGTTGCGGATTTGGCA ACTGGGGAGACTGTTTGGAGGGCTGCCGAGCAGGAGGGGATTGCACAGAGCGTGTTCGTG GCCACTGCGGCGGTAGATTTGTATGTCAAGTGTGGGGAGATGGCAAAGGCGAGGGAGGTG TTTGACAAGATGCGGGACAAGGATGCAGTGGCCTGGGGCGCCATGGTTGGGGGATATGCT TCCAACGGCCACCCACGAGAGGCTCTGGACCTTTTCCTTGCAATGCAGGCAGAGGGAGTG AGGCCAGATTGCTATGCGGTAGCTGGGGCGCTATCAGCCTGCACAAGGTTGGGTGCATTG GATCTTGGACGGCAGGCAATCAGGATGGTGGACTGGGATGAGTTTCTTGACAATCCAGTC CTAGGGACTGCATTGATTGATATGTATGCCAAGTGTGGGAGCACGGCCGAGGCATGGGTG GTGTTCCAGCAAATGAGGAAGAAGGACATTATTGTTTGGAACGCCATGATCTTGGGGCTT GGCATGACTGGCCATGAAAAGACTGCATTTACCCTTATCGGTCAGATGGAGAAGTCCGGT GTGAAATTGAATGACAATACTTTCATTGGCTTGCTCTGCAGCTGTACACACACTGGCCTC ATTCAAGATGGGCGACGGTATTTCCATAACATGACTAAGCTATACCACATCAGCCCTAGG ATTGAGCATTACGGTTGTATAGTCGATCTGCTCAGTCGCGCTGGGTTGTTGCAGGAGGCT CATCAGCTTATTGATGATATGCCGATGCCAGCAAATGCTGTCATATTGGGTGCACTTCTT GGTGGCTGCAAGATTCACCGAAATGCAGAGCTTGCTGAACATGTATTGACGCAGCTCATT CGACTGGAGCCCTGGAATTCTGGGAACTATGTCATGCTCTCTAACATATACTCTAACAGA GGCAGATGGGAGGACGCAGCAAAGCTTAGATTGGACATGAAGGAAAAAGGGGTCGAGAAG GTTCCTGCATGCAGCTGGGTTGAGTTTGAAGGTAAGGTCCATGAGTTCCGTGTCGGAGAC AAGTCACATCCTCTTTCAGATCAGATTTACAAAAAGCTCGACGAATTAGGATTGGAAATG AAAACCATGGGTTATGAACCAACAACAGAAGTGGTGATGTTTGATGTTGAAGATGAAGAG AAGGAGCACACACTAGTGCATCATAGTGAGAAACTAGCAATTGCATTTAACCTTCTCGTC ACTGGACCAGGGGAGACCATTAGGGTCACCAAGAACCTCAGAGTTTGCAGTGACTGTCAC ACTGCAATTAAACTCATATCGAGGATAACTCATCGGGAGATCATTGTCCGAGATAACAAT CGATTTCATTGTTTTAGAGATGGTTCTTGCTCCTGCAATGACTATTGGTAG

Peptide Sequence

PEP ID	Os12t0109300-01
PEP Infomation	pep chromosome:IRGSP-1.0:12:499852:502261:-1 gene:Os12g0109300 transcript:Os12t0109300-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os12t0109300-01)
Sequence	VHSLTGFGALFMSGDAIRRLLLAGVAPSNRPPPLTVKLLHARLLRLDLLAALSPLLLRAL SSSALHLHALRLHCLLPNPSHLTFPIALKSASRLPHPLRAGEQLHARSLKLPSHTNPHVL TSLLTLYARCGLLHRAQRVFDEMPHPSTVSWTALITAYMDAGDLREAVHVARNAFANGMR PDSFTAVRVLTACARVADLATGETVWRAAEQEGIAQSVFVATAAVDLYVKCGEMAKAREV FDKMRDKDAVAWGAMVGGYASNGHPREALDLFLAMQAEGVRPDCYAVAGALSACTRLGAL DLGRQAIRMVDWDEFLDNPVLGTALIDMYAKCGSTAEAWVVFQQMRKKDIIVWNAMILGL GMTGHEKTAFTLIGQMEKSGVKLNDNTFIGLLCSCTHTGLIQDGRRYFHNMTKLYHISPR IEHYGCIVDLLSRAGLLQEAHQLIDDMPMPANAVILGALLGGCKIHRNAELAEHVLTQLI RLEPWNSGNYVMLSNIYSNRGRWEDAAKLRLDMKEKGVEKVPACSWVEFEGKVHEFRVGD KSHPLSDQIYKKLDELGLEMKTMGYEPTTEVVMFDVEDEEKEHTLVHHSEKLAIAFNLLV TGPGETIRVTKNLRVCSDCHTAIKLISRITHREIIVRDNNRFHCFRDGSCSCNDYW

Transcript Sequence

Transcript ID	Os12t0109300-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:12:499852:502261:-1 gene:Os12g0109300 gene_biotype:protein_coding transcript_biotype:protein_coding description:Pentatricopeptide repeat domain containing protein. (Os12t0109300-01)
Sequence	GTTCACTCGTTGACTGGCTTTGGCGCTTTATTTATGTCGGGCGATGCCATCAGGCGGCTA CTCCTCGCCGGCGTCGCCCCCAGCAACCGCCCCCCGCCGCTCACCGTCAAGCTCCTCCAC GCCCGCCTCCTCCGCCTCGACCTCCTCGCCGCCCTCTCCCCGCTCCTCCTCCGCGCCCTC TCCTCCTCCGCCCTTCACCTCCACGCGCTCCGCCTCCACTGCCTCCTCCCCAACCCCTCC CACCTCACCTTCCCCATCGCCCTCAAGTCGGCCTCCCGCCTTCCGCACCCTCTCCGCGCG GGCGAGCAGCTCCACGCGCGCTCCCTCAAGCTTCCCTCCCACACCAACCCCCATGTCCTC ACCTCCCTCCTCACCCTCTACGCAAGATGCGGCCTCCTACACCGAGCCCAGAGGGTGTTC GACGAAATGCCACACCCCAGCACCGTCTCCTGGACCGCTCTCATCACTGCCTACATGGAT GCTGGGGACCTCAGGGAAGCCGTCCATGTCGCAAGGAATGCTTTTGCGAATGGTATGCGA CCGGACAGCTTCACGGCCGTGCGTGTCCTGACTGCGTGTGCTCGGGTTGCGGATTTGGCA ACTGGGGAGACTGTTTGGAGGGCTGCCGAGCAGGAGGGGATTGCACAGAGCGTGTTCGTG GCCACTGCGGCGGTAGATTTGTATGTCAAGTGTGGGGAGATGGCAAAGGCGAGGGAGGTG TTTGACAAGATGCGGGACAAGGATGCAGTGGCCTGGGGCGCCATGGTTGGGGGATATGCT TCCAACGGCCACCCACGAGAGGCTCTGGACCTTTTCCTTGCAATGCAGGCAGAGGGAGTG AGGCCAGATTGCTATGCGGTAGCTGGGGCGCTATCAGCCTGCACAAGGTTGGGTGCATTG GATCTTGGACGGCAGGCAATCAGGATGGTGGACTGGGATGAGTTTCTTGACAATCCAGTC CTAGGGACTGCATTGATTGATATGTATGCCAAGTGTGGGAGCACGGCCGAGGCATGGGTG GTGTTCCAGCAAATGAGGAAGAAGGACATTATTGTTTGGAACGCCATGATCTTGGGGCTT GGCATGACTGGCCATGAAAAGACTGCATTTACCCTTATCGGTCAGATGGAGAAGTCCGGT GTGAAATTGAATGACAATACTTTCATTGGCTTGCTCTGCAGCTGTACACACACTGGCCTC ATTCAAGATGGGCGACGGTATTTCCATAACATGACTAAGCTATACCACATCAGCCCTAGG ATTGAGCATTACGGTTGTATAGTCGATCTGCTCAGTCGCGCTGGGTTGTTGCAGGAGGCT CATCAGCTTATTGATGATATGCCGATGCCAGCAAATGCTGTCATATTGGGTGCACTTCTT GGTGGCTGCAAGATTCACCGAAATGCAGAGCTTGCTGAACATGTATTGACGCAGCTCATT CGACTGGAGCCCTGGAATTCTGGGAACTATGTCATGCTCTCTAACATATACTCTAACAGA GGCAGATGGGAGGACGCAGCAAAGCTTAGATTGGACATGAAGGAAAAAGGGGTCGAGAAG GTTCCTGCATGCAGCTGGGTTGAGTTTGAAGGTAAGGTCCATGAGTTCCGTGTCGGAGAC AAGTCACATCCTCTTTCAGATCAGATTTACAAAAAGCTCGACGAATTAGGATTGGAAATG AAAACCATGGGTTATGAACCAACAACAGAAGTGGTGATGTTTGATGTTGAAGATGAAGAG AAGGAGCACACACTAGTGCATCATAGTGAGAAACTAGCAATTGCATTTAACCTTCTCGTC ACTGGACCAGGGGAGACCATTAGGGTCACCAAGAACCTCAGAGTTTGCAGTGACTGTCAC ACTGCAATTAAACTCATATCGAGGATAACTCATCGGGAGATCATTGTCCGAGATAACAAT CGATTTCATTGTTTTAGAGATGGTTCTTGCTCCTGCAATGACTATTGGTAGAACTAGAAA GTAGACAACAATTTGTTGAGAGCTGTGATTGGTGGATAGAAGAGTATAAAGCAGATGATG ATGGGAGAGTATAAACCAGATGATATTATGTTTGGAGGCACTTCTATGCTTCACTTCTTT TGAAATGCACAACTTTTAAAGCACAAATAAAGGATGGATTGCAGTTGCAGCTAAATATTC CTTCAAGTGCTTCATGATTTGTGCAATTATTTAAACAGAAAGGAATATATATCTCTTCAA GTGATTGGTTCCAACCAAGACACACACATGTAGGATAAACTATTTCTTCCCCTTCAGACA ATCTGCACCGGTAATTGTTGATCCTTCTGATGCTTCTTTTGAATGTTGTACTTATTTTCA TTCTCTTTTGTTCTACTGCTATATATGTTTTTGACTTCTCAACAGTGGTAATTATTGTGA AAACTTTTTC