Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os12t0108500-01
CDS Infomation	cds chromosome:IRGSP-1.0:12:464682:468347:1 gene:Os12g0108500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:F-box protein 636 description:Similar to Leucine Rich Repeat family protein, expressed. (Os12t0108500-01)
Sequence	CCAAACGCCCACCATTATTACTACCTTCCCTTCCCTTCTCTCGTTTCAGTCAACTTCGCC ATGGCCTCGCCTGCGCCCACCCACCACGCCAAGCGCCGCCGCCTCGCCCTGCCCCCGCCC CCGCCCCCGCACCTCAACGACCTCGCCGACGAGCTCCTCTTCCTCATCCTCGACCGTGCC GCCGCCCATGACCCACGCGCCCTCAAGTCCTTCTCCCTCGTCTCCCGCGCCTGCCACGCC GCCGAGTCGCGCCACCGCCGCGTCCTCCGCCCCTTCCGCCCCGACCTCCTCCCCGCCGCG CTCGCCCGCTACCCCGCCATCTCCCACCTCGATCTCTCCCTCTGCCCCCGCCTCCCCGAC GCCGCCCTCGCCGCGCTCCCCGCCGCGCCGTTCGTCTCCGCCGTCGACCTCTCCCGCTCC CGCGGGTTCGGCGCCGCCGGCCTCGCCGCGCTCGTCGCCGCGTTCCCCAATCTCACGGAC CTCGACCTCTCCAATGGCCTCGACCTCGGGGATGCCGCGGCGGCGGAGGTGGCCAAGGCG CGCCGCCTCCAGAGGCTCTCGCTGTCGCGATGCAAGCGCATCACTGACATGGGGCTCGGA TGCATCGCCGTCGGATGCCCCGACCTGCGCGAGCTCTCGCTCAAGTGGTGCATCGGGGTC ACTCATCTGGGACTAGACCTCCTTGCCCTCAAGTGCAACAAGCTCAACATCCTGGATCTC TCCTACACCATGATAGTAAAAAAATGCTTTCCAGCCATCATGAAGCTACAAAATCTACAA GTGTTACTACTGGTGGGATGTAATGGAATTGATGATGATGCCCTTACTAGTCTTGATCAA GAATGCAGCAAATCACTACAGGTTCTTGATATGTCAAACTCTTACAATGTCACTCATGTC GGTGTTCTGTCCATTGTGAAGGCAATGCCGAATCTGTTGGAACTCAATCTATCATACTGC TCTCCTGTTACTCCTTCTATGTCAAGCAGCTTCGAAATGATTCATAAATTGCAGAAACTG AAGCTGGATGGTTGCCAATTCATGGATGATGGATTAAAATCCATTGGGAAATCCTGTGTT TCTTTGAGGGAGTTAAGTCTGAGCAAATGTTCTGGAGTGACAGACACAGACCTTTCTTTT GTCGTGCCAAGACTGAAAAATTTGCTGAAGCTGGATGTTACTTGTTGTCGCAAAATCACT GATGTTTCATTAGCTGCCATCACAACCTCATGCCCATCCCTCATCTCTCTGAGAATGGAG TCCTGTAGCCTTGTTTCCAGCAAAGGACTACAGCTGATTGGAAGGCGCTGCACTCACTTG GAGGAATTGGATCTTACTGACACTGATTTGGATGATGAAGGTTTGAAAGCTCTCTCTGGA TGCAGCAAACTTTCAAGCCTAAAAATTGGCATATGCTTGAGGATAACTGATGAGGGCCTT AGACACGTTAGCAAGTCCTGTCCAGATCTCCGAGATATCGATTTGTACAGGTCTGGGGCG ATCAGTGATGAAGGGGTTACTCATATAGCTCAAGGATGCCCAATGTTAGAGTCTATCAAT ATGTCCTACTGCACAAAATTAACAGACTGTTCACTGAGATCACTTTCAAAATGCATAAAG CTGAACACATTGGAGATTCGTGGCTGCCCCATGGTTTCATCTGCTGGTCTCTCGGAAATT GCAACAGGATGCAGGCTACTTTCTAAGCTTGATATCAAGAAATGCTTTGAGATCAATGAC ATGGGAATGATTTTCCTTTCCCAATTCTCTCACAACCTCCGGCAGATAAACTTGTCATAT TGTTCGGTCACCGACATTGGGCTTATATCCCTTTCAAGCATATGTGGCTTGCAGAACATG ACCATTGTGCATTTAGCGGGTGTTACGCCTAATGGACTGATAGCTGCTCTTATGGTCTGT GGTTTGAGAAAAGTGAAGCTTCATGAAGCATTCAAATCCATGGTGCCATCACATATGCTC AAAGTTGTTGAAGCCCGTGGTTGTCTTTTCCAGTGGATTAATAAACCCTACCAGGTTGCG GTAGAACCGTGTGACGTATGGAAGCAGCAGTCGCAGGATTTGCTTGTACAGTGA

Peptide Sequence

PEP ID	Os12t0108500-01
PEP Infomation	pep chromosome:IRGSP-1.0:12:464682:468347:1 gene:Os12g0108500 transcript:Os12t0108500-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:F-box protein 636 description:Similar to Leucine Rich Repeat family protein, expressed. (Os12t0108500-01)
Sequence	PNAHHYYYLPFPSLVSVNFAMASPAPTHHAKRRRLALPPPPPPHLNDLADELLFLILDRA AAHDPRALKSFSLVSRACHAAESRHRRVLRPFRPDLLPAALARYPAISHLDLSLCPRLPD AALAALPAAPFVSAVDLSRSRGFGAAGLAALVAAFPNLTDLDLSNGLDLGDAAAAEVAKA RRLQRLSLSRCKRITDMGLGCIAVGCPDLRELSLKWCIGVTHLGLDLLALKCNKLNILDL SYTMIVKKCFPAIMKLQNLQVLLLVGCNGIDDDALTSLDQECSKSLQVLDMSNSYNVTHV GVLSIVKAMPNLLELNLSYCSPVTPSMSSSFEMIHKLQKLKLDGCQFMDDGLKSIGKSCV SLRELSLSKCSGVTDTDLSFVVPRLKNLLKLDVTCCRKITDVSLAAITTSCPSLISLRME SCSLVSSKGLQLIGRRCTHLEELDLTDTDLDDEGLKALSGCSKLSSLKIGICLRITDEGL RHVSKSCPDLRDIDLYRSGAISDEGVTHIAQGCPMLESINMSYCTKLTDCSLRSLSKCIK LNTLEIRGCPMVSSAGLSEIATGCRLLSKLDIKKCFEINDMGMIFLSQFSHNLRQINLSY CSVTDIGLISLSSICGLQNMTIVHLAGVTPNGLIAALMVCGLRKVKLHEAFKSMVPSHML KVVEARGCLFQWINKPYQVAVEPCDVWKQQSQDLLVQ

Transcript Sequence

Transcript ID	Os12t0108500-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:12:464682:468347:1 gene:Os12g0108500 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:F-box protein 636 description:Similar to Leucine Rich Repeat family protein, expressed. (Os12t0108500-01)
Sequence	GCCAAACGCCCACCATTATTACTACCTTCCCTTCCCTTCTCTCGTTTCAGTCAACTTCGC CATGGCCTCGCCTGCGCCCACCCACCACGCCAAGCGCCGCCGCCTCGCCCTGCCCCCGCC CCCGCCCCCGCACCTCAACGACCTCGCCGACGAGCTCCTCTTCCTCATCCTCGACCGTGC CGCCGCCCATGACCCACGCGCCCTCAAGTCCTTCTCCCTCGTCTCCCGCGCCTGCCACGC CGCCGAGTCGCGCCACCGCCGCGTCCTCCGCCCCTTCCGCCCCGACCTCCTCCCCGCCGC GCTCGCCCGCTACCCCGCCATCTCCCACCTCGATCTCTCCCTCTGCCCCCGCCTCCCCGA CGCCGCCCTCGCCGCGCTCCCCGCCGCGCCGTTCGTCTCCGCCGTCGACCTCTCCCGCTC CCGCGGGTTCGGCGCCGCCGGCCTCGCCGCGCTCGTCGCCGCGTTCCCCAATCTCACGGA CCTCGACCTCTCCAATGGCCTCGACCTCGGGGATGCCGCGGCGGCGGAGGTGGCCAAGGC GCGCCGCCTCCAGAGGCTCTCGCTGTCGCGATGCAAGCGCATCACTGACATGGGGCTCGG ATGCATCGCCGTCGGATGCCCCGACCTGCGCGAGCTCTCGCTCAAGTGGTGCATCGGGGT CACTCATCTGGGACTAGACCTCCTTGCCCTCAAGTGCAACAAGCTCAACATCCTGGATCT CTCCTACACCATGATAGTAAAAAAATGCTTTCCAGCCATCATGAAGCTACAAAATCTACA AGTGTTACTACTGGTGGGATGTAATGGAATTGATGATGATGCCCTTACTAGTCTTGATCA AGAATGCAGCAAATCACTACAGGTTCTTGATATGTCAAACTCTTACAATGTCACTCATGT CGGTGTTCTGTCCATTGTGAAGGCAATGCCGAATCTGTTGGAACTCAATCTATCATACTG CTCTCCTGTTACTCCTTCTATGTCAAGCAGCTTCGAAATGATTCATAAATTGCAGAAACT GAAGCTGGATGGTTGCCAATTCATGGATGATGGATTAAAATCCATTGGGAAATCCTGTGT TTCTTTGAGGGAGTTAAGTCTGAGCAAATGTTCTGGAGTGACAGACACAGACCTTTCTTT TGTCGTGCCAAGACTGAAAAATTTGCTGAAGCTGGATGTTACTTGTTGTCGCAAAATCAC TGATGTTTCATTAGCTGCCATCACAACCTCATGCCCATCCCTCATCTCTCTGAGAATGGA GTCCTGTAGCCTTGTTTCCAGCAAAGGACTACAGCTGATTGGAAGGCGCTGCACTCACTT GGAGGAATTGGATCTTACTGACACTGATTTGGATGATGAAGGTTTGAAAGCTCTCTCTGG ATGCAGCAAACTTTCAAGCCTAAAAATTGGCATATGCTTGAGGATAACTGATGAGGGCCT TAGACACGTTAGCAAGTCCTGTCCAGATCTCCGAGATATCGATTTGTACAGGTCTGGGGC GATCAGTGATGAAGGGGTTACTCATATAGCTCAAGGATGCCCAATGTTAGAGTCTATCAA TATGTCCTACTGCACAAAATTAACAGACTGTTCACTGAGATCACTTTCAAAATGCATAAA GCTGAACACATTGGAGATTCGTGGCTGCCCCATGGTTTCATCTGCTGGTCTCTCGGAAAT TGCAACAGGATGCAGGCTACTTTCTAAGCTTGATATCAAGAAATGCTTTGAGATCAATGA CATGGGAATGATTTTCCTTTCCCAATTCTCTCACAACCTCCGGCAGATAAACTTGTCATA TTGTTCGGTCACCGACATTGGGCTTATATCCCTTTCAAGCATATGTGGCTTGCAGAACAT GACCATTGTGCATTTAGCGGGTGTTACGCCTAATGGACTGATAGCTGCTCTTATGGTCTG TGGTTTGAGAAAAGTGAAGCTTCATGAAGCATTCAAATCCATGGTGCCATCACATATGCT CAAAGTTGTTGAAGCCCGTGGTTGTCTTTTCCAGTGGATTAATAAACCCTACCAGGTTGC GGTAGAACCGTGTGACGTATGGAAGCAGCAGTCGCAGGATTTGCTTGTACAGTGAAATGT TTCAAAGATAAACGTTGTGGAAACTGGGGCGTGTTTTGTGGTGTTGAATTTATCTTAGAG CAATATCTCCAGTCCTAGAGAATGAGCTCCAAAAGTTTTGTGCCATAACTGGCTGAATAG TGTATTGAATTACTGACGGTAGTATTGTCAGAACAACATACTAGTACTGGTATTTTGCTT GTATGCCAGTGGAGGCGAGGGAGGTTATATTCTTGATGTGTTGTATATAGCGCAGGTAGG AATCAACAATCAAAGAGAGATTATTGGGGTAAAGCATGTAGTAAGTGTGGAGTATGTGAT ATGCCTTGTTGTGCCTTTTTGATGCACAATTTGATTAATGGAATGGAACATTGCATTCGC ACT