Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os12t0108100-01
CDS Infomation	cds chromosome:IRGSP-1.0:12:439128:443649:-1 gene:Os12g0108100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Ser Thr specific protein kinase-like protein. (Os12t0108100-01)
Sequence	ATGTCGTCAAACTCCACTCTAACAGACTCTCTTCATGAGAGAACAATTGTTTTTGGCCTG AAACTTTGGGTTGTAATTGGGATATCTGTTGGAGCATCCCTACTTGGTGTTCTTCTCATC CTTATTGTATGCCTCACCATACAAACTTGGATCAAACGGTCACGTAGGACATTCAAGGAA ATTCCAATTACCCAAATACCTTCTGCATCCAAAGATATCAAGGAAGTGAGGGCAGTGGAG GAATTTTTGCCCAATGATTTCGTTGTACATGATGGACTTCTACTCGCCATTCAGAATGAA CCTGTTGAACCAGTGGATAAAGATGTGAATCAGTTTGCTCAAGAGGACAAGACGATACAA GGAGAAGATAACAGTTCTTCTGTTCCTCTTCATTATGTGGACAACTATGATGGAATTCAA TCTGTTTCCACATGTGAACAGTCTTCCTCGCATGCTCCCGCCGACTCTGTTCCCTTGCCA GGCTTACCTGAGTTCTCTTACCTTGGCTGGGGTCATTGGTTCACTCTCAGGGATCTGGAA CTTGCAACCAACTGTTTTTCAAAGGATAATGTAATTGGTGAGGGTGGGTATGGTGTTGTC TACCGTGGCAGATTATCAAATGGCACCCCAGTGGCTGTCAAAAAAATCCTTAACAATCTA GGACAAGCTGAGAGAGAATTCAGAGTGGAAGTTGAAGCAATTGGTCATGTCCGACACAAG AATTTGGTTCGCCTTTTGGGGTACTGTGTTGAAGGCACTCAAAGGATGCTTGTGTATGAG TATGTCAACAATGGGAATCTTGAAAGTTGGTTACATGGAGAGTTATCCCAATATAGTTCT CTCACTTGGCTAGCGCGCATGAAAATTCTTTTGGGTACTGCAAAGGCCCTTGCTTACTTA CATGAGGCAATTGAACCAAAAGTTGTGCATCGTGATATCAAGGCCAGTAATATATTGATT GATGATGAGTTTAACGCCAAAATATCTGACTTTGGTTTGGCCAAGATGCTAGGTGCTGGT AAAAGTCATATTGCTACTCGAGTTATGGGTACTTTTGGCTATGTTGCGCCCGAGTATGCT AACAGTGGACTTTTGAATGAAAAGAGTGATGTCTACAGTTTTGGGGTGGTTCTGCTGGAA GCTATTACAGGTAGAGATCCCATTGACTATGATCGCCCTCCAGATGAGGTAAACCTAGTT GACTGGCTTAAAATGATGGTTGCCAACAGACGATCAGAAGAAGTTGTTGATCCAAACCTG GAGAGAAGACCATCGACAAAGGAGCTCAAACGTGCCCTTTTGACAGCTCTGAGGTGCATC GATTTGAATTCTGAGAAGAGACCAAGGATGGACCAGGTGGTCCGGATGTTGGACTCTAAT GAACCCATTCCTCAAGAGGAAAGAAGACAACGACAGAACCACATCTCTAATAATTCAGAA ACCGAGCCATTAAGAGGCAAGAGCAGCAGCGGCAAGAGTGATGCCCCTGAAAATGAGATG AGGCCACCTCGGTATAAGAATCGATCATTTCCCCCCAAGTGA

Peptide Sequence

PEP ID	Os12t0108100-01
PEP Infomation	pep chromosome:IRGSP-1.0:12:439128:443649:-1 gene:Os12g0108100 transcript:Os12t0108100-01 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Ser Thr specific protein kinase-like protein. (Os12t0108100-01)
Sequence	MSSNSTLTDSLHERTIVFGLKLWVVIGISVGASLLGVLLILIVCLTIQTWIKRSRRTFKE IPITQIPSASKDIKEVRAVEEFLPNDFVVHDGLLLAIQNEPVEPVDKDVNQFAQEDKTIQ GEDNSSSVPLHYVDNYDGIQSVSTCEQSSSHAPADSVPLPGLPEFSYLGWGHWFTLRDLE LATNCFSKDNVIGEGGYGVVYRGRLSNGTPVAVKKILNNLGQAEREFRVEVEAIGHVRHK NLVRLLGYCVEGTQRMLVYEYVNNGNLESWLHGELSQYSSLTWLARMKILLGTAKALAYL HEAIEPKVVHRDIKASNILIDDEFNAKISDFGLAKMLGAGKSHIATRVMGTFGYVAPEYA NSGLLNEKSDVYSFGVVLLEAITGRDPIDYDRPPDEVNLVDWLKMMVANRRSEEVVDPNL ERRPSTKELKRALLTALRCIDLNSEKRPRMDQVVRMLDSNEPIPQEERRQRQNHISNNSE TEPLRGKSSSGKSDAPENEMRPPRYKNRSFPPK

Transcript Sequence

Transcript ID	Os12t0108100-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:12:439128:443649:-1 gene:Os12g0108100 gene_biotype:protein_coding transcript_biotype:protein_coding description:Similar to Ser Thr specific protein kinase-like protein. (Os12t0108100-01)
Sequence	AGGGAAGCCGTCGGCAGAGACTCCAGCAAACGGACGGCGCCGCAGCCTCCGCCAGGCGGC AGTGGGAGCAGGCAGCAGCTGCAAGGTGGCGGCCTCAAGCGGAGGCGAGCAGTCTCAGGG AAACCAAGCTCGCCGCCGTCGTCCCCATTCTTCCGTCGCAGATTTCGCTGTGACTGGTTC CTTGTGATTGAATCCATAGGAACCGAACCCAAATCTTGGAATTGTTTTTGCAGTGCAAGT CTAATCCTCGGGAGGAAAAAAAAAGAAAGCGTAATAAGTCCTGCACCAAGCAAGCAATCT CCAAAGTGCAAGCTTTCTCTTCTTCCTGCGTCTGGATCTCGCTCAGGTTTCCCCTCTGCC TGCCACTCCCCATGGCTCTGGATTCAGGTCGCTCTTCAGCATTCACTACCGTATTCACTT CTTGAAGGCCAATTTCTGGTTCCTCACCATTGTATCCAATAAAGGTACTTGATGATCCGA AGATGTCGTCAAACTCCACTCTAACAGACTCTCTTCATGAGAGAACAATTGTTTTTGGCC TGAAACTTTGGGTTGTAATTGGGATATCTGTTGGAGCATCCCTACTTGGTGTTCTTCTCA TCCTTATTGTATGCCTCACCATACAAACTTGGATCAAACGGTCACGTAGGACATTCAAGG AAATTCCAATTACCCAAATACCTTCTGCATCCAAAGATATCAAGGAAGTGAGGGCAGTGG AGGAATTTTTGCCCAATGATTTCGTTGTACATGATGGACTTCTACTCGCCATTCAGAATG AACCTGTTGAACCAGTGGATAAAGATGTGAATCAGTTTGCTCAAGAGGACAAGACGATAC AAGGAGAAGATAACAGTTCTTCTGTTCCTCTTCATTATGTGGACAACTATGATGGAATTC AATCTGTTTCCACATGTGAACAGTCTTCCTCGCATGCTCCCGCCGACTCTGTTCCCTTGC CAGGCTTACCTGAGTTCTCTTACCTTGGCTGGGGTCATTGGTTCACTCTCAGGGATCTGG AACTTGCAACCAACTGTTTTTCAAAGGATAATGTAATTGGTGAGGGTGGGTATGGTGTTG TCTACCGTGGCAGATTATCAAATGGCACCCCAGTGGCTGTCAAAAAAATCCTTAACAATC TAGGACAAGCTGAGAGAGAATTCAGAGTGGAAGTTGAAGCAATTGGTCATGTCCGACACA AGAATTTGGTTCGCCTTTTGGGGTACTGTGTTGAAGGCACTCAAAGGATGCTTGTGTATG AGTATGTCAACAATGGGAATCTTGAAAGTTGGTTACATGGAGAGTTATCCCAATATAGTT CTCTCACTTGGCTAGCGCGCATGAAAATTCTTTTGGGTACTGCAAAGGCCCTTGCTTACT TACATGAGGCAATTGAACCAAAAGTTGTGCATCGTGATATCAAGGCCAGTAATATATTGA TTGATGATGAGTTTAACGCCAAAATATCTGACTTTGGTTTGGCCAAGATGCTAGGTGCTG GTAAAAGTCATATTGCTACTCGAGTTATGGGTACTTTTGGCTATGTTGCGCCCGAGTATG CTAACAGTGGACTTTTGAATGAAAAGAGTGATGTCTACAGTTTTGGGGTGGTTCTGCTGG AAGCTATTACAGGTAGAGATCCCATTGACTATGATCGCCCTCCAGATGAGGTAAACCTAG TTGACTGGCTTAAAATGATGGTTGCCAACAGACGATCAGAAGAAGTTGTTGATCCAAACC TGGAGAGAAGACCATCGACAAAGGAGCTCAAACGTGCCCTTTTGACAGCTCTGAGGTGCA TCGATTTGAATTCTGAGAAGAGACCAAGGATGGACCAGGTGGTCCGGATGTTGGACTCTA ATGAACCCATTCCTCAAGAGGAAAGAAGACAACGACAGAACCACATCTCTAATAATTCAG AAACCGAGCCATTAAGAGGCAAGAGCAGCAGCGGCAAGAGTGATGCCCCTGAAAATGAGA TGAGGCCACCTCGGTATAAGAATCGATCATTTCCCCCCAAGTGAAAAGTGAAAAGCATAC TAGAGTGGAAGTTATGGAGTTACCTGCGATGCTCTCAATACATAATGAATTGGTCAATTG TTTTGTTTCTCTTTTATTATTTCTCTTCACCTGATCAATTTTTTTGTTCCCTGGGAGGCT GGGGGAGCGGCCATTGCTGTTACACATATTTGTATATTTCTTGAAACATGTACAGTGCTG GTGTGTGATACATGTACAGTAGTTTGTGTGTGATAGATAGTTGAAGGATGCACATGAGAG CATAAAAGCTATTATTTAGAAGCTAGTGGCTGGTATGGTTGCTGGTGTGAGGAAGTGCAT GAAGAAACCAATGAAATAACTTTTTCATATTTTCTGTATACTCTAAGAGTATAAAGAGGC AAATGAAAGAAAAATTGACTTTC