Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os12t0108000-01
CDS Infomation	cds chromosome:IRGSP-1.0:12:434076:438615:1 gene:Os12g0108000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:LACCASE 27 description:Similar to Laccase (Diphenol oxidase). (Os12t0108000-01)
Sequence	ATGGGAAGCAGAGGGTGTTCATGCTGGCTCTTAAGCCTGGCACTGCTCTGCTCCCTGGCT GCTGCCAAGGAGCAATACCATGAGTTTGTGATCAGGGAGACAACAGTGAAGAGGCTGTGC AAGAGCCAAAGCATAATGACGGTGAACGGGCAGTTCCCGGGGCCGACGCTGGAGATAAAG GAGGGGGACTCGCTGATCATCAACCTGATAAACCGTGGGAGGTACAACGTGACGCTGCAC TGGCACGGGGTGCGGCAGATGAGGACGGGGTGGTCGGACGGGCCGGAGTACGTGACGCAG TGCCCGGTGAGGCCCGGGCAGAGCTACCGGTATCGCTTCACGGTGGCGGCGCAGGAGGGC ACCCTCTGGTGGCACGCTCACTCCTCCTGGCTCCGCGCCACCGTCTACGGCGCCCTCCTC ATCCGCCCCCGCGATGGCACCAGCTACCCCTTCCACGTCCAGCCCACCAGAGAGCTCGCC CCCATCCTGCTCGGGGAATGGTGGGACATGAACCCCGTCGACGTGGTGCGCGCCGCCACG CGCACCGGCGCCGCGCCCAACATCTCCGACGCCCTCACCGTAAACGCCCAGCCCGGCGAC CTCTACAGCTGCTCCTCCCACGACACGGCCTTCTTCCCCGTCACCTCCGGCGAGACCAAC CTCCTCCGCTTCATCAACGCCGCGCTCAACACGGAGCTCTTCGTCTCCCTCGCCGGTCAC AACATGACCGTCGTCGCCGCCGACGCCTCCTACACCAAACCGTACACCACCTCCCTCCTC CTCCTCGCCCCCGGCCAGACCACCGACGTCCTCGTCACCTTCGACCAACCTCCCGGCCGC TACTACCTCGCCGCCCGCGCCTACGCCAGCGCCCAGGGCGTCCCCTTCGACAACACCACC ACCACCGCCATCTTCGACTACGGCGCCGCCAACAACGCCTCCAGCGCCGCCATCGCCATG CCCACCCTCCCGGCGTACAACGACACCACCGCCGCCACCGCCTTCACGACGAACCTGCGC GGCCTCCGCAAGGCGGAGCTCCCGTCGCGCGTGGACGAGAGCCTCTTCTTCACCGTCGGC GTCGGCCTCTTCAACTGCACCAACGCCACGGCGCAGCAGTGCGGCGGGCCCAACGGGACG CGGTTCGCGGCGAGCATCAACAACGTCTCCTTCGTGCTCCCCTCCTCCACCTCCATCCTC CAGGCGCACCACCACGGCGCACCCGGCGGCGTGTTCACCGCCGACTTCCCGGCGAGCCCG CCGGTGCAGTTCGACTACACGGCGCAGAACGTGAGCCGCGCGCTGTGGCAGCCGGTGCCG GGCACCAAGGTGTACAAGCTCAAGTACGGCTCCGCCGTGCAGGTGGTGCTCCAGGGCACC AACATCTTCGCCGGCGAGAACCACCCCATCCACCTCCACGGCTACGACTTCTACATCCTC GCCGAGGGGTTGGGCAACTTCGATGCCGGCGCCGACACGGCCAAGTTCAACATGGAGGAT CCGCCGATGAGGAACACGGTGGGCGTGCCGGTGAACGGGTGGGCGGTGATACGGTTCGTG GCGGACAACCCGGGGGTGTGGCTGATGCACTGCCATCTCGACGTGCACATCACCTGGGGC CTCGCCATGGCCTTCCTCGTCGACGACGGCGTCGGCGAGCTGCAGTCGCTGGAGGCGCCT CCACCTGACCTGCCACTCTGCTAG

Peptide Sequence

PEP ID	Os12t0108000-01
PEP Infomation	pep chromosome:IRGSP-1.0:12:434076:438615:1 gene:Os12g0108000 transcript:Os12t0108000-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:LACCASE 27 description:Similar to Laccase (Diphenol oxidase). (Os12t0108000-01)
Sequence	MGSRGCSCWLLSLALLCSLAAAKEQYHEFVIRETTVKRLCKSQSIMTVNGQFPGPTLEIK EGDSLIINLINRGRYNVTLHWHGVRQMRTGWSDGPEYVTQCPVRPGQSYRYRFTVAAQEG TLWWHAHSSWLRATVYGALLIRPRDGTSYPFHVQPTRELAPILLGEWWDMNPVDVVRAAT RTGAAPNISDALTVNAQPGDLYSCSSHDTAFFPVTSGETNLLRFINAALNTELFVSLAGH NMTVVAADASYTKPYTTSLLLLAPGQTTDVLVTFDQPPGRYYLAARAYASAQGVPFDNTT TTAIFDYGAANNASSAAIAMPTLPAYNDTTAATAFTTNLRGLRKAELPSRVDESLFFTVG VGLFNCTNATAQQCGGPNGTRFAASINNVSFVLPSSTSILQAHHHGAPGGVFTADFPASP PVQFDYTAQNVSRALWQPVPGTKVYKLKYGSAVQVVLQGTNIFAGENHPIHLHGYDFYIL AEGLGNFDAGADTAKFNMEDPPMRNTVGVPVNGWAVIRFVADNPGVWLMHCHLDVHITWG LAMAFLVDDGVGELQSLEAPPPDLPLC

Transcript Sequence

Transcript ID	Os12t0108000-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:12:434076:438615:1 gene:Os12g0108000 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:LACCASE 27 description:Similar to Laccase (Diphenol oxidase). (Os12t0108000-01)
Sequence	ATGCTGCACGCAATCAATTCAGGTCTTGTAAGCTTGCATATAGCTGTCCAGATATGTTTG GTTGCTGACAACAAGCATCTTGATCGATCGAGTTTCAGTATAGTTAAGTTTCAGACTATC AGGCAGCATGGGAAGCAGAGGGTGTTCATGCTGGCTCTTAAGCCTGGCACTGCTCTGCTC CCTGGCTGCTGCCAAGGAGCAATACCATGAGTTTGTGATCAGGGAGACAACAGTGAAGAG GCTGTGCAAGAGCCAAAGCATAATGACGGTGAACGGGCAGTTCCCGGGGCCGACGCTGGA GATAAAGGAGGGGGACTCGCTGATCATCAACCTGATAAACCGTGGGAGGTACAACGTGAC GCTGCACTGGCACGGGGTGCGGCAGATGAGGACGGGGTGGTCGGACGGGCCGGAGTACGT GACGCAGTGCCCGGTGAGGCCCGGGCAGAGCTACCGGTATCGCTTCACGGTGGCGGCGCA GGAGGGCACCCTCTGGTGGCACGCTCACTCCTCCTGGCTCCGCGCCACCGTCTACGGCGC CCTCCTCATCCGCCCCCGCGATGGCACCAGCTACCCCTTCCACGTCCAGCCCACCAGAGA GCTCGCCCCCATCCTGCTCGGGGAATGGTGGGACATGAACCCCGTCGACGTGGTGCGCGC CGCCACGCGCACCGGCGCCGCGCCCAACATCTCCGACGCCCTCACCGTAAACGCCCAGCC CGGCGACCTCTACAGCTGCTCCTCCCACGACACGGCCTTCTTCCCCGTCACCTCCGGCGA GACCAACCTCCTCCGCTTCATCAACGCCGCGCTCAACACGGAGCTCTTCGTCTCCCTCGC CGGTCACAACATGACCGTCGTCGCCGCCGACGCCTCCTACACCAAACCGTACACCACCTC CCTCCTCCTCCTCGCCCCCGGCCAGACCACCGACGTCCTCGTCACCTTCGACCAACCTCC CGGCCGCTACTACCTCGCCGCCCGCGCCTACGCCAGCGCCCAGGGCGTCCCCTTCGACAA CACCACCACCACCGCCATCTTCGACTACGGCGCCGCCAACAACGCCTCCAGCGCCGCCAT CGCCATGCCCACCCTCCCGGCGTACAACGACACCACCGCCGCCACCGCCTTCACGACGAA CCTGCGCGGCCTCCGCAAGGCGGAGCTCCCGTCGCGCGTGGACGAGAGCCTCTTCTTCAC CGTCGGCGTCGGCCTCTTCAACTGCACCAACGCCACGGCGCAGCAGTGCGGCGGGCCCAA CGGGACGCGGTTCGCGGCGAGCATCAACAACGTCTCCTTCGTGCTCCCCTCCTCCACCTC CATCCTCCAGGCGCACCACCACGGCGCACCCGGCGGCGTGTTCACCGCCGACTTCCCGGC GAGCCCGCCGGTGCAGTTCGACTACACGGCGCAGAACGTGAGCCGCGCGCTGTGGCAGCC GGTGCCGGGCACCAAGGTGTACAAGCTCAAGTACGGCTCCGCCGTGCAGGTGGTGCTCCA GGGCACCAACATCTTCGCCGGCGAGAACCACCCCATCCACCTCCACGGCTACGACTTCTA CATCCTCGCCGAGGGGTTGGGCAACTTCGATGCCGGCGCCGACACGGCCAAGTTCAACAT GGAGGATCCGCCGATGAGGAACACGGTGGGCGTGCCGGTGAACGGGTGGGCGGTGATACG GTTCGTGGCGGACAACCCGGGGGTGTGGCTGATGCACTGCCATCTCGACGTGCACATCAC CTGGGGCCTCGCCATGGCCTTCCTCGTCGACGACGGCGTCGGCGAGCTGCAGTCGCTGGA GGCGCCTCCACCTGACCTGCCACTCTGCTAGTGCCTCCATCAACACATCAAATTAATCAC CTCTTGTGTTACTGTTAGCAGCTGATTAATCATTTGGAGATCAGCATTACTGAATTAATT ACATGTATCATTTTTCACATTTGATTCATTAAGAAGATAACAACATTCTCTTC