Plant GARDEN
How To ▶︎

JA

EN

TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

Search

By Species By Keywords Genes By Markers By Traits

Let’s Analyze!!

SNP Detection
(lang=JA only) Sequences Other Tools

Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os12t0107600-00
CDS Infomation

cds chromosome:IRGSP-1.0:12:414959:415621:1 gene:Os12g0107600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Prenylated rab acceptor PRA1 family protein. (Os12t0107600-00)
Sequence

ATGGCCGCCGCCTCCCCTCCACTCCTCCCCACCACCGTCCTCCCCGCCAACACCACCGCC
ACCGTCTCCCCTGCCCCCACCTCCGTCTCCTCCGCCGATGCCAAGCCTGCCGCCACGCGC
GCCTTCCTCGCCCGCCTCCTCGACTCCGTCAAGCGCGCGCTCTCCGGGGCCCGCCCCTGG
CCGGAGCTCATCGACCGCAGCGCCCTCTCCCACTCGGAATCCCTCTCCGACTCCGGCGCC
CGCCTCCGCAAGAACCTCGCCTACTTCCGTGTCAACTACGCCGCCATCGTCGCCCTCTCC
CTCGCCGCGTCCCTCCTCGCCCACCCCTTCTCCCTTGCCGCGCTCCTCGCCCTCCTCGCC
GCCTGGTGCTTCCTCTACCTCCTCCGCCCCTCCGACGCGCCCCCGCTCGCCGCCTTCGGA
CGCACCTTCTCCGACAGGGAGACCCTCGGGGGACTCATCGTCGCATCCGCCTTCGTCATC
TTCCTCACCTCCGTCGGATCCCTCATCTTCTCCGCGCTCGCCCTCGGCGCCGCCATCGTC
TGCGCGCACGGCGCATTCCGCATCCCGGAGGACCTCTTCCTCGACGAGCCAGACCAGGCC
AACGGCGCCGCCTCCGTCAACCTGCTCTCCTTCATCACCAGCGCCACCGGAGGCCGCGTC
TGA

Peptide Sequence

PEP ID

Os12t0107600-00
PEP Infomation

pep chromosome:IRGSP-1.0:12:414959:415621:1 gene:Os12g0107600 transcript:Os12t0107600-00 gene_biotype:protein_coding transcript_biotype:protein_coding description:Prenylated rab acceptor PRA1 family protein. (Os12t0107600-00)
Sequence

MAAASPPLLPTTVLPANTTATVSPAPTSVSSADAKPAATRAFLARLLDSVKRALSGARPW
PELIDRSALSHSESLSDSGARLRKNLAYFRVNYAAIVALSLAASLLAHPFSLAALLALLA
AWCFLYLLRPSDAPPLAAFGRTFSDRETLGGLIVASAFVIFLTSVGSLIFSALALGAAIV
CAHGAFRIPEDLFLDEPDQANGAASVNLLSFITSATGGRV

Transcript Sequence

Transcript ID

Os12t0107600-00
Transcript Infomation

cdna chromosome:IRGSP-1.0:12:414959:415621:1 gene:Os12g0107600 gene_biotype:protein_coding transcript_biotype:protein_coding description:Prenylated rab acceptor PRA1 family protein. (Os12t0107600-00)
Sequence

ATGGCCGCCGCCTCCCCTCCACTCCTCCCCACCACCGTCCTCCCCGCCAACACCACCGCC
ACCGTCTCCCCTGCCCCCACCTCCGTCTCCTCCGCCGATGCCAAGCCTGCCGCCACGCGC
GCCTTCCTCGCCCGCCTCCTCGACTCCGTCAAGCGCGCGCTCTCCGGGGCCCGCCCCTGG
CCGGAGCTCATCGACCGCAGCGCCCTCTCCCACTCGGAATCCCTCTCCGACTCCGGCGCC
CGCCTCCGCAAGAACCTCGCCTACTTCCGTGTCAACTACGCCGCCATCGTCGCCCTCTCC
CTCGCCGCGTCCCTCCTCGCCCACCCCTTCTCCCTTGCCGCGCTCCTCGCCCTCCTCGCC
GCCTGGTGCTTCCTCTACCTCCTCCGCCCCTCCGACGCGCCCCCGCTCGCCGCCTTCGGA
CGCACCTTCTCCGACAGGGAGACCCTCGGGGGACTCATCGTCGCATCCGCCTTCGTCATC
TTCCTCACCTCCGTCGGATCCCTCATCTTCTCCGCGCTCGCCCTCGGCGCCGCCATCGTC
TGCGCGCACGGCGCATTCCGCATCCCGGAGGACCTCTTCCTCGACGAGCCAGACCAGGCC
AACGGCGCCGCCTCCGTCAACCTGCTCTCCTTCATCACCAGCGCCACCGGAGGCCGCGTC
TGA