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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os12t0106900-02
CDS Infomation

cds chromosome:IRGSP-1.0:12:374666:376851:-1 gene:Os12g0106900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hemopexin domain containing protein. (Os12t0106900-01);Hypothetical conserved gene. (Os12t0106900-02)
Sequence

TGGACGGGACCGGCACTGGAGGACCTGCTCCCACAACTCTCCCATGAGGAGCAACTACGA
TTGCACAACCACTTGCGTGAGCACGAGCGTATCCTCAAGTGGCACAACAAGAATTCTCCT
CCAATATCTTCTCTGCACTCAGAAGGGGAGCGTGACTTCTTCATCATTATCCATGTCCGC
TACGCTCTCCACCATTACAATGCCAAACACCCAGATGAGGAGTTTGATGCTGTGAAGCCT
CTGATGGAATCCAGTGTACGTTTCAGGGGCCAGGTGTGGTTCCACATCAACTTCTGGGCT
CGCTCCCGCAAGAGCAAAAAGATCAAGCGCTTCTTTGCTGAGGTGCACTACAAGCCTCCC
AGCAGCAGCAGCTCTGTCTGCTCTTACCTGCCATTTCCAGTCCCAGGAGCTGAGAGGCCA
CCCAGCAGCAGCTCCGTCTCCTCGGATCTGCTACTTCCACTCCCAATTCCTGTCGTTGAA
GCATGCACCATCATTGAAGAGCCTCTTGGGCAGTACAGGAAGAGCTGCGCGTTTTGTCGT
GGTCACTTAGACATTTTACACCCCATGGGTCGTAAATTTGTTTGTGGAAACGACAAGGAC
CGGTTTGAGCAACAACTCTTGCCGTGCGGGTCTATAGGGCTTGAGATGCCATTCACTTGC
CGCCTGGGTCCGGCCTCTGTCAACAGTAGTCATGGGGAAAAAGAAGACTAG

Peptide Sequence

PEP ID

Os12t0106900-02
PEP Infomation

pep chromosome:IRGSP-1.0:12:374666:376851:-1 gene:Os12g0106900 transcript:Os12t0106900-02 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hemopexin domain containing protein. (Os12t0106900-01);Hypothetical conserved gene. (Os12t0106900-02)
Sequence

WTGPALEDLLPQLSHEEQLRLHNHLREHERILKWHNKNSPPISSLHSEGERDFFIIIHVR
YALHHYNAKHPDEEFDAVKPLMESSVRFRGQVWFHINFWARSRKSKKIKRFFAEVHYKPP
SSSSSVCSYLPFPVPGAERPPSSSSVSSDLLLPLPIPVVEACTIIEEPLGQYRKSCAFCR
GHLDILHPMGRKFVCGNDKDRFEQQLLPCGSIGLEMPFTCRLGPASVNSSHGEKED

Transcript Sequence

Transcript ID

Os12t0106900-02
Transcript Infomation

cdna chromosome:IRGSP-1.0:12:374666:376851:-1 gene:Os12g0106900 gene_biotype:protein_coding transcript_biotype:protein_coding description:Hemopexin domain containing protein. (Os12t0106900-01);Hypothetical conserved gene. (Os12t0106900-02)
Sequence

GTGGACGGGACCGGCACTGGAGGACCTGCTCCCACAACTCTCCCATGAGGAGCAACTACG
ATTGCACAACCACTTGCGTGAGCACGAGCGTATCCTCAAGTGGCACAACAAGAATTCTCC
TCCAATATCTTCTCTGCACTCAGAAGGGGAGCGTGACTTCTTCATCATTATCCATGTCCG
CTACGCTCTCCACCATTACAATGCCAAACACCCAGATGAGGAGTTTGATGCTGTGAAGCC
TCTGATGGAATCCAGTGTACGTTTCAGGGGCCAGGTGTGGTTCCACATCAACTTCTGGGC
TCGCTCCCGCAAGAGCAAAAAGATCAAGCGCTTCTTTGCTGAGGTGCACTACAAGCCTCC
CAGCAGCAGCAGCTCTGTCTGCTCTTACCTGCCATTTCCAGTCCCAGGAGCTGAGAGGCC
ACCCAGCAGCAGCTCCGTCTCCTCGGATCTGCTACTTCCACTCCCAATTCCTGTCGTTGA
AGCATGCACCATCATTGAAGAGCCTCTTGGGCAGTACAGGAAGAGCTGCGCGTTTTGTCG
TGGTCACTTAGACATTTTACACCCCATGGGTCGTAAATTTGTTTGTGGAAACGACAAGGA
CCGGTTTGAGCAACAACTCTTGCCGTGCGGGTCTATAGGGCTTGAGATGCCATTCACTTG
CCGCCTGGGTCCGGCCTCTGTCAACAGTAGTCATGGGGAAAAAGAAGACTAGGGGGAATA
ATGAAGTGGCCCCTTGGACGCCCTTTTGCTCGCATCGTTTGTGCCAATCAAGTCTGGTGA
TAACAGAAATTGAATTGTCTTGTACTACCTTCGTCCTCAAAATATAAGAAAAACTAAATG
GGACATATCCTACTATTATGAACCTGGATAAAAATGATTCTACTCAGATTCAATAGTTTC
TTATATTTTCAACGGAGGGAGGGAGTAAAACGTTAGCAGTCCTCTTATCTTGTGCAGAAT
ATGATTGTACACTGTTCAGAACTCTTGAGATTCAGAATATTGTTTGCCTGAGGGAGGTTG