Gene sequences

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Trait-Related Loci

Oryza sativa

CDS Sequence

CDS ID	Os12t0106300-01
CDS Infomation	cds chromosome:IRGSP-1.0:12:337846:341464:1 gene:Os12g0106300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:trichome birefringence-like 1 description:Xylan acetyltransferase, Resistance to bacterial leaf blight disease (Os12t0106300-01)
Sequence	ATGTGGAGTGCTCTCTTCTCCCATCTGAGAGAGGTTCACAAGAGAAGCGGAGTTAAGGAG GAGAAGTTGATAATGAAGTCGCCACCAGCAGCAGGTGAGGCCGGCTGCCACAAGCCACAG GCGACTGCCACCAACAAGATGACGGTGCTGCAGTCCCCGCTGGGGCTCAGGACCATCCTC ACCTCCCTCGTCGCCTTCTTCATCGTCGTCAGCTCCGTCTCCCTCCTCTTCGACCGCGGC CAGGATGCTCAGGCGCAACTCGCCGTCGAGCAGCATCAGCACCAAGAAGTTCTGCTCAAG CAGAAGCCGGCATCAGCAGCAGTGGGCGAGCAGAAATCAGTGGTAGTAGATCAGTCGTCG TTGAGGAGCCAGGAGGCGCAGGTGCAGTGGACATCTGAGCTGCAGGACGTGGCCACGGAC AGCGGCGACGGCGGCTTCGACGGCGAGGAGGACTGCAACTGGTCGTTGGGACGGTGGGTG TACGACAACGCGTCGCGGCCACTCTACTCCGGCTTGAAGTGCTCCTTCATCTTCGACGAG GTGGCCTGCGACAAGTATGGAAGGAATGACACCAAGTACCAGCACTGGAGATGGCAGCCT CACGGTTGCAACCTTCCAAGATTCAATGCCACAAAGTTTCTTGAAAAGCTTAGGAACAAG AGACTGGTTTTTGTGGGCGATTCAGTAAACAGAAATCAATGGGTGTCGATGGTGTGCATG GTGGAGCACTTCATCCCTGATGGCCGCAAGATGCGCGTTTACAACGGCTCCCTTATCTCC TTCAAAGCATTTGAGTACAATGCGACGATAGATTTCTACTGGTCACCACTGCTATTGGAA TCAAACAGCGACAACCCCATAATTCACAGAGTGGAGTACCGGATCATAAGGGCAGACAGG ATTGAGAAACACGCCAATGTCTGGAAGGACGCTGATTTCATCGTCTTCAACTCCTACCTT TGGTGGAGGAAGCAGAGGGATGGTATGATGATGAAAGTCATGTATGGTTCATTTGAGGAC GGGGATGCAAAGTTAGATGAGGTGCAAATGGTTGATGGTTATGAGATAGCTCTCAAGAAA CTAACTGAATATCTTGGAGCCAATATCAACAAGAACAAGACTAGAATCTTCTTTGCAGGC TCATCACCTGCCCATTCCTGGGCTAGCAACTGGGGAGGAGATGACAACAACAAGTGTCTA AACGAAACAGAACCAATTCAGATAGAAGATTATAGGAGTGCAACCACAGACTACGGCATG ATGGACAAGGCGAAGGAGATATTTGGAACACTGGAACCAAAGGGCATACATGTTCAGATA CTGAACATCACCCAGCTTTCTGAGTACCGCAAGGACGCCCATCCAACGATATTCAGGAGA CAGTACGTTCCTCTGACGAAAGAGCAGATTGCAAACCCGAGCATCTACGCAGACTGCACG CATTGGTGCCTCCCTGGAGTTCCTGATGTTTGGAACGAGTTCTTGTATGCATACATTATG CACAAATGA

Peptide Sequence

PEP ID	Os12t0106300-01
PEP Infomation	pep chromosome:IRGSP-1.0:12:337846:341464:1 gene:Os12g0106300 transcript:Os12t0106300-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:trichome birefringence-like 1 description:Xylan acetyltransferase, Resistance to bacterial leaf blight disease (Os12t0106300-01)
Sequence	MWSALFSHLREVHKRSGVKEEKLIMKSPPAAGEAGCHKPQATATNKMTVLQSPLGLRTIL TSLVAFFIVVSSVSLLFDRGQDAQAQLAVEQHQHQEVLLKQKPASAAVGEQKSVVVDQSS LRSQEAQVQWTSELQDVATDSGDGGFDGEEDCNWSLGRWVYDNASRPLYSGLKCSFIFDE VACDKYGRNDTKYQHWRWQPHGCNLPRFNATKFLEKLRNKRLVFVGDSVNRNQWVSMVCM VEHFIPDGRKMRVYNGSLISFKAFEYNATIDFYWSPLLLESNSDNPIIHRVEYRIIRADR IEKHANVWKDADFIVFNSYLWWRKQRDGMMMKVMYGSFEDGDAKLDEVQMVDGYEIALKK LTEYLGANINKNKTRIFFAGSSPAHSWASNWGGDDNNKCLNETEPIQIEDYRSATTDYGM MDKAKEIFGTLEPKGIHVQILNITQLSEYRKDAHPTIFRRQYVPLTKEQIANPSIYADCT HWCLPGVPDVWNEFLYAYIMHK

Transcript Sequence

Transcript ID	Os12t0106300-01
Transcript Infomation	cdna chromosome:IRGSP-1.0:12:337846:341464:1 gene:Os12g0106300 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:trichome birefringence-like 1 description:Xylan acetyltransferase, Resistance to bacterial leaf blight disease (Os12t0106300-01)
Sequence	ACACAACCATTCCAATTCTATTCTAACCCATTTATAAGCTCCTTCATTGGAGGTTAGCCC AAGGGTCAGTGTTGCTTGAGAGGTACTCACCCTGTGCAGGTGCCAGTGGACTCAGGCCAT TTAGCTAGCTAGCCAAAGCCAATTGCCATGTGGAGTGCTCTCTTCTCCCATCTGAGAGAG GTTCACAAGAGAAGCGGAGTTAAGGAGGAGAAGTTGATAATGAAGTCGCCACCAGCAGCA GGTGAGGCCGGCTGCCACAAGCCACAGGCGACTGCCACCAACAAGATGACGGTGCTGCAG TCCCCGCTGGGGCTCAGGACCATCCTCACCTCCCTCGTCGCCTTCTTCATCGTCGTCAGC TCCGTCTCCCTCCTCTTCGACCGCGGCCAGGATGCTCAGGCGCAACTCGCCGTCGAGCAG CATCAGCACCAAGAAGTTCTGCTCAAGCAGAAGCCGGCATCAGCAGCAGTGGGCGAGCAG AAATCAGTGGTAGTAGATCAGTCGTCGTTGAGGAGCCAGGAGGCGCAGGTGCAGTGGACA TCTGAGCTGCAGGACGTGGCCACGGACAGCGGCGACGGCGGCTTCGACGGCGAGGAGGAC TGCAACTGGTCGTTGGGACGGTGGGTGTACGACAACGCGTCGCGGCCACTCTACTCCGGC TTGAAGTGCTCCTTCATCTTCGACGAGGTGGCCTGCGACAAGTATGGAAGGAATGACACC AAGTACCAGCACTGGAGATGGCAGCCTCACGGTTGCAACCTTCCAAGATTCAATGCCACA AAGTTTCTTGAAAAGCTTAGGAACAAGAGACTGGTTTTTGTGGGCGATTCAGTAAACAGA AATCAATGGGTGTCGATGGTGTGCATGGTGGAGCACTTCATCCCTGATGGCCGCAAGATG CGCGTTTACAACGGCTCCCTTATCTCCTTCAAAGCATTTGAGTACAATGCGACGATAGAT TTCTACTGGTCACCACTGCTATTGGAATCAAACAGCGACAACCCCATAATTCACAGAGTG GAGTACCGGATCATAAGGGCAGACAGGATTGAGAAACACGCCAATGTCTGGAAGGACGCT GATTTCATCGTCTTCAACTCCTACCTTTGGTGGAGGAAGCAGAGGGATGGTATGATGATG AAAGTCATGTATGGTTCATTTGAGGACGGGGATGCAAAGTTAGATGAGGTGCAAATGGTT GATGGTTATGAGATAGCTCTCAAGAAACTAACTGAATATCTTGGAGCCAATATCAACAAG AACAAGACTAGAATCTTCTTTGCAGGCTCATCACCTGCCCATTCCTGGGCTAGCAACTGG GGAGGAGATGACAACAACAAGTGTCTAAACGAAACAGAACCAATTCAGATAGAAGATTAT AGGAGTGCAACCACAGACTACGGCATGATGGACAAGGCGAAGGAGATATTTGGAACACTG GAACCAAAGGGCATACATGTTCAGATACTGAACATCACCCAGCTTTCTGAGTACCGCAAG GACGCCCATCCAACGATATTCAGGAGACAGTACGTTCCTCTGACGAAAGAGCAGATTGCA AACCCGAGCATCTACGCAGACTGCACGCATTGGTGCCTCCCTGGAGTTCCTGATGTTTGG AACGAGTTCTTGTATGCATACATTATGCACAAATGATATATGTATAATAATGTAATCTTA ATTTGGCCAAATTTCTTCTTTGTTAACTTGTGGGTGTCTAAGTAGGTATAAGTGCACAGT ACTTGGCCCCCATCAATTTTTTTTTCTTTTTTGACATTTACATCATTACATTACATGTAA AGAGAAAGGGAAGAACATAAGCGCAGAAATGAAAAGGAAGAAGATAAGTTAATTTGCC