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TOP > About the Species(Oryza sativa subsp. japonica) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Oryza sativa

CDS Sequence

CDS ID

Os12t0106200-01
CDS Infomation

cds chromosome:IRGSP-1.0:12:331023:331715:1 gene:Os12g0106200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:LBD12-1 description:Lateral organ boundaries domain (LBD) family transcription factor, Shoot apical meristem (SAM) size determination (Os12t0106200-01)
Sequence

ATGGCGGGAAGCGGGAGCGGGACACCGTGCGCGTCGTGCAAGCTGCTGCGGCGGCGGTGC
ACGTCGGAGTGCGTGTTCGCGCCCTACTTCCCGGCGGAGGAGGCGCAGCGGTTCGCCATG
GTGCACCGGGTGTTCGGCGCCAGCAACGTCAGCAAGATGCTGCTCGATGTGCCGCCGCCG
CAGAGGCCCGACGCCGTCAGCAGCCTCGTCTACGAGGCCAACGCCCGTATGAGGGACCCC
GTCTACGGCTGCGTCGCCGCCATCTCCTTCCTCCAGAACCAAGTCTCCCAGCTCCAGATG
CAGCTCGCCCTCGCCCACGCCGAGACCGCCGCCCTGCAACTCCAGCTGCAGCAGCAGCAC
CAAGATCAAGATGACCACCACCACCAGCAGTGCATCCTGGAGAATGCTGCTGCTCATCAC
CAGCTGATGCTGCAGGAGGCATTCCTCAAGAAAGAGTCCATGTGGACATAA

Peptide Sequence

PEP ID

Os12t0106200-01
PEP Infomation

pep chromosome:IRGSP-1.0:12:331023:331715:1 gene:Os12g0106200 transcript:Os12t0106200-01 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:LBD12-1 description:Lateral organ boundaries domain (LBD) family transcription factor, Shoot apical meristem (SAM) size determination (Os12t0106200-01)
Sequence

MAGSGSGTPCASCKLLRRRCTSECVFAPYFPAEEAQRFAMVHRVFGASNVSKMLLDVPPP
QRPDAVSSLVYEANARMRDPVYGCVAAISFLQNQVSQLQMQLALAHAETAALQLQLQQQH
QDQDDHHHQQCILENAAAHHQLMLQEAFLKKESMWT

Transcript Sequence

Transcript ID

Os12t0106200-01
Transcript Infomation

cdna chromosome:IRGSP-1.0:12:331023:331715:1 gene:Os12g0106200 gene_biotype:protein_coding transcript_biotype:protein_coding gene_symbol:LBD12-1 description:Lateral organ boundaries domain (LBD) family transcription factor, Shoot apical meristem (SAM) size determination (Os12t0106200-01)
Sequence

AGCCTGCTCCTCTGCATCAACTGTTTGCTGCCCAGTACAGTAGAGGCCTGCACTTGCAAG
TTGCAACTGCAAGCAATGGCGGGAAGCGGGAGCGGGACACCGTGCGCGTCGTGCAAGCTG
CTGCGGCGGCGGTGCACGTCGGAGTGCGTGTTCGCGCCCTACTTCCCGGCGGAGGAGGCG
CAGCGGTTCGCCATGGTGCACCGGGTGTTCGGCGCCAGCAACGTCAGCAAGATGCTGCTC
GATGTGCCGCCGCCGCAGAGGCCCGACGCCGTCAGCAGCCTCGTCTACGAGGCCAACGCC
CGTATGAGGGACCCCGTCTACGGCTGCGTCGCCGCCATCTCCTTCCTCCAGAACCAAGTC
TCCCAGCTCCAGATGCAGCTCGCCCTCGCCCACGCCGAGACCGCCGCCCTGCAACTCCAG
CTGCAGCAGCAGCACCAAGATCAAGATGACCACCACCACCAGCAGTGCATCCTGGAGAAT
GCTGCTGCTCATCACCAGCTGATGCTGCAGGAGGCATTCCTCAAGAAAGAGTCCATGTGG
ACATAATTGTAGTAGATGCTTTCTAGTAAATCTTTATGCTTCGATTGATATGATTTGATG
TTGCACAAAGATTTATAGTAAATCTTTGTGCTTGTTGTCTTCTCTTACGTAATTTCCGGA
AAGAATGAAAATGAAGAACAACAATTCGGTCTC